Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU7-113P-201ENST00000459273 62 ntBASIC2.61□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU7-45P-201ENST00000459460 63 ntBASIC2.61□□□□□ -1.99
ZKSCAN3Q9BRR0 AC113410.1-201ENST00000505029 247 ntBASIC2.61□□□□□ -1.99
ZKSCAN3Q9BRR0 FO624990.1-201ENST00000636373 85 ntBASIC2.61□□□□□ -1.99
ZKSCAN3Q9BRR0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZKSCAN3Q9BRR0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZKSCAN3Q9BRR0 Y_RNA.93-201ENST00000363066 109 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU1-138P-201ENST00000384093 164 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-49P-201ENST00000384256 107 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 Y_RNA.558-201ENST00000384685 113 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RN7SKP223-201ENST00000410582 62 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU4-69P-201ENST00000410677 143 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 MTATP8P2-201ENST00000435212 202 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORD123-201ENST00000459473 70 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RN7SL429P-201ENST00000479090 223 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RN7SL489P-201ENST00000486185 223 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RN7SL327P-201ENST00000488659 223 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 AC099513.1-201ENST00000490423 301 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU2-13P-201ENST00000515909 113 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-958P-201ENST00000516995 106 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 DEFB131E-201ENST00000532329 154 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 DNAJC19P9-201ENST00000555084 351 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 MIR3618-201ENST00000580330 88 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 FAM71BP1-201ENST00000604431 523 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 RN7SL853P-201ENST00000617250 223 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 MIR6873-201ENST00000622788 63 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORD3E-202ENST00000627253 216 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 AC095038.3-201ENST00000634439 195 ntBASIC2.6□□□□□ -1.99
ZKSCAN3Q9BRR0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORA22.1-201ENST00000362701 134 ntBASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORD115-2-201ENST00000362842 82 ntBASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 Y_RNA.220-201ENST00000364244 109 ntBASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORD115-20-201ENST00000365099 82 ntBASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 AL023284.1-201ENST00000403956 276 ntBASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 SUMO1P4-201ENST00000429430 302 ntBASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU7-73P-201ENST00000458743 63 ntBASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 MIR6841-201ENST00000637129 72 ntBASIC2.59□□□□□ -1.99
ZKSCAN3Q9BRR0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ZKSCAN3Q9BRR0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.107-201ENST00000363190 121 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.171-201ENST00000363760 102 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 SNORD73B-201ENST00000364394 72 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 MIR488-201ENST00000365739 83 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 SNORA67.3-201ENST00000384366 140 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 MIR526A1-201ENST00000384897 85 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 RNU1-41P-201ENST00000516161 162 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 RNU1-48P-201ENST00000516400 162 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 MIR548AR-201ENST00000582191 57 ntBASIC2.58□□□□□ -2
ZKSCAN3Q9BRR0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 MIR424-201ENST00000362227 98 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.10-201ENST00000362371 110 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 RNU6-363P-201ENST00000362895 105 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 U8.2-201ENST00000363156 134 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.430-201ENST00000384081 110 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 RNU6-1067P-201ENST00000384752 107 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 SNORD77B-201ENST00000391112 67 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP425-201ENST00000410336 112 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 AL513534.2-201ENST00000603836 250 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 AC243994.1-201ENST00000618627 109 ntBASIC2.57□□□□□ -2
ZKSCAN3Q9BRR0 RNY3P2-201ENST00000362918 102 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.155-201ENST00000363632 101 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 RNU4-67P-201ENST00000364569 141 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 RNU6-409P-201ENST00000384114 104 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 SNORA64-201ENST00000384674 134 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 SNORA26.6-201ENST00000391256 115 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 RNU6-733P-201ENST00000410759 104 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 SCARNA23-201ENST00000516060 130 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 MIR4694-201ENST00000578534 80 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 SNORD14A-201ENST00000606526 91 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 AL020996.3-201ENST00000606617 222 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.773-201ENST00000607168 90 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 MIR4791-201ENST00000607666 84 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 MIR1255B1-201ENST00000636325 63 ntBASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 RNU6-1099P-201ENST00000363533 107 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.537-201ENST00000384626 109 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 SNORD28B-201ENST00000390993 75 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.601-201ENST00000410500 113 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 AL356320.1-201ENST00000429616 163 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP33-201ENST00000516687 98 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 RNU6-1258P-201ENST00000516911 111 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 MIR6717-201ENST00000622747 73 ntBASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ZKSCAN3Q9BRR0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.54□□□□□ -2
ZKSCAN3Q9BRR0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.54□□□□□ -2
ZKSCAN3Q9BRR0 MIR1273D-201ENST00000577266 86 ntBASIC2.54□□□□□ -2
ZKSCAN3Q9BRR0 MIR3945-201ENST00000581853 98 ntBASIC2.54□□□□□ -2
ZKSCAN3Q9BRR0 MALAT1.1-201ENST00000618249 95 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 410 ms