Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
EBF4Q9BQW3 RNU6-643P-201ENST00000384018 107 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 RNU6-910P-201ENST00000390844 107 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 U8.17-201ENST00000391292 132 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 MIR548I3-201ENST00000408378 149 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 MIR548I1-201ENST00000408810 149 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 RNU6-394P-201ENST00000410735 107 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 AC245047.7-201ENST00000440265 293 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 AC087343.1-201ENST00000477341 475 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.88□□□□□ -2.27
EBF4Q9BQW3 RNU6-255P-201ENST00000516957 105 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 RNU6-182P-201ENST00000516970 105 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 RNU6-365P-201ENST00000517113 106 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 MIR4431-201ENST00000579990 94 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 MIR378D2-201ENST00000580636 98 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 AC087685.1-201ENST00000587507 141 ntBASIC0.88□□□□□ -2.27
EBF4Q9BQW3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.88□□□□□ -2.27
EBF4Q9BQW3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.87□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 RNU6-888P-201ENST00000363010 101 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 RNU4-84P-201ENST00000364200 139 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.398-201ENST00000383952 99 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 MIR452-201ENST00000385020 85 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 MIR136-201ENST00000385207 82 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 MIR802-201ENST00000390235 94 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
EBF4Q9BQW3 RNU2-55P-201ENST00000411146 174 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 AC023449.1-201ENST00000454464 154 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.87□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.662-201ENST00000516028 97 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 SNORD111.1-201ENST00000516421 86 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 RNA5SP153-201ENST00000516498 76 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.700-201ENST00000516806 100 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.87□□□□□ -2.27
EBF4Q9BQW3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.86□□□□□ -2.27
EBF4Q9BQW3 SNORA25.3-201ENST00000363205 127 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.164-201ENST00000363709 102 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 SNORD115-28-201ENST00000363931 81 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 RNU6-312P-201ENST00000364629 107 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.270-201ENST00000364693 104 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.272-201ENST00000364696 102 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.441-201ENST00000384123 112 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 RNU6-588P-201ENST00000410281 105 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 HMGN2P32-201ENST00000444648 269 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 RPS26P48-201ENST00000491713 339 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.86□□□□□ -2.27
EBF4Q9BQW3 RNU6-830P-201ENST00000516353 107 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 SNORA18.4-201ENST00000516440 124 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 RNU6-504P-201ENST00000516568 104 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 SNORA74.3-201ENST00000517108 154 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 SNORA70.22-201ENST00000517160 124 ntBASIC0.86□□□□□ -2.27
EBF4Q9BQW3 RNU6-774P-201ENST00000363238 107 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 SNORD24-201ENST00000383884 75 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 SNORD38C-201ENST00000384381 69 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 MIR222-201ENST00000384992 110 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.85□□□□□ -2.27
EBF4Q9BQW3 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 RNU2-13P-201ENST00000515909 113 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 RNU6-346P-201ENST00000516288 111 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 RNU7-121P-201ENST00000516604 62 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 MIR3144-201ENST00000579460 79 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 MIR4662B-201ENST00000579498 81 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 MIR4764-201ENST00000580680 88 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 AL357312.1-201ENST00000603879 298 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 AC098479.1-201ENST00000609225 154 ntBASIC0.85□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.170-201ENST00000363746 110 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 SNORD116-18-201ENST00000383961 92 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 Y_RNA.521-201ENST00000384560 114 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 RNU6-239P-201ENST00000390990 99 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 MIR1302-7-201ENST00000408841 72 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 AC090844.1-201ENST00000422019 156 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 RNU7-45P-201ENST00000459460 63 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 UBL5P1-201ENST00000507979 193 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 RNU6-1053P-201ENST00000515930 101 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 SNORD79.1-201ENST00000516069 84 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 SNORD116-25-201ENST00000516517 92 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 SCARNA15-202ENST00000516881 127 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 RNU2-60P-201ENST00000517290 128 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 snoU13.31-201ENST00000607291 104 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 MIR6078-201ENST00000611069 100 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 AC012676.2-201ENST00000619258 186 ntBASIC0.84□□□□□ -2.27
EBF4Q9BQW3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
EBF4Q9BQW3 RNU1-124P-201ENST00000363861 145 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.180-201ENST00000363867 113 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.241-201ENST00000364470 117 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 RNU6-209P-201ENST00000384118 107 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 SNORA20-201ENST00000384662 132 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.555-201ENST00000384673 110 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 MIR520C-201ENST00000385005 87 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 RNU6-913P-201ENST00000390913 95 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 SNORA75.2-201ENST00000391138 150 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 SNORA75.3-201ENST00000391231 150 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 AC002429.1-201ENST00000437672 148 ntBASIC0.83□□□□□ -2.28
EBF4Q9BQW3 AP003484.1-201ENST00000530974 250 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms