Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-514P-201ENST00000384208 107 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 SNORA72-201ENST00000384339 132 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 Y_RNA.494-201ENST00000384432 111 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 MT-TG-201ENST00000387429 68 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 RNU6-381P-201ENST00000391259 108 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 RNA5SP482-201ENST00000391269 118 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 AC002429.1-201ENST00000437672 148 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 SNRPGP8-201ENST00000454064 226 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 RNU6-437P-201ENST00000459408 95 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 AC114811.1-201ENST00000507207 168 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 SNORA70.12-201ENST00000516084 153 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 RNU6-1278P-201ENST00000516130 107 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 RNU6-1219P-201ENST00000516143 112 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 ACA64.5-201ENST00000516207 127 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 AC007751.1-201ENST00000529260 376 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 AL021707.8-201ENST00000609428 183 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.7□□□□□ -2.3
CDX2Q99626 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CDX2Q99626 Y_RNA.91-201ENST00000363042 107 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 RNU6-682P-201ENST00000363843 106 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 Y_RNA.199-201ENST00000364014 102 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 Y_RNA.257-201ENST00000364596 102 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 Y_RNA.297-201ENST00000364950 91 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 Y_RNA.476-201ENST00000384347 108 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 Y_RNA.486-201ENST00000384398 107 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 MIR516B2-201ENST00000385190 85 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 Y_RNA.587-201ENST00000391210 103 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 MIR548H3-201ENST00000408771 118 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 Y_RNA.622-201ENST00000411091 108 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 AC063976.4-201ENST00000421971 163 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 SNRPGP14-201ENST00000435400 219 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.69□□□□□ -2.3
CDX2Q99626 SNORA62.5-201ENST00000516634 120 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 MIR4514-201ENST00000581410 57 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 PRELID3BP2-201ENST00000605362 201 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 U6.106-201ENST00000636360 105 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 MIR376A2-201ENST00000636782 80 ntBASIC0.69□□□□□ -2.3
CDX2Q99626 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
CDX2Q99626 MIR411-201ENST00000362239 96 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 Y_RNA.83-201ENST00000363005 113 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 Y_RNA.150-201ENST00000363562 102 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 RNU6-674P-201ENST00000363831 107 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 Y_RNA.200-201ENST00000364018 102 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 Y_RNA.265-201ENST00000364677 108 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 RNA5SP63-201ENST00000391225 112 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 PCNPP3-201ENST00000393579 471 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 AL451046.2-201ENST00000403074 277 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 RNU6-710P-201ENST00000410424 105 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 RNU2-70P-201ENST00000410718 179 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 RNU5E-9P-201ENST00000411164 104 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 AC108059.2-201ENST00000434626 151 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 SUMO1P2-201ENST00000452524 304 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 Y_RNA.666-201ENST00000516187 112 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 RNU6-861P-201ENST00000516745 106 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 RNU2-56P-201ENST00000516826 190 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CDX2Q99626 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.68□□□□□ -2.3
CDX2Q99626 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.68□□□□□ -2.3
CDX2Q99626 MIR4636-201ENST00000582271 80 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.68□□□□□ -2.3
CDX2Q99626 AL357312.1-201ENST00000603879 298 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 MTND5P32-201ENST00000560711 1802 ntBASIC0.68□□□□□ -2.3
CDX2Q99626 Y_RNA.23-201ENST00000362496 106 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 RNU6-508P-201ENST00000363231 103 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 RNU6-200P-201ENST00000364743 107 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 RNU6-484P-201ENST00000384016 107 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 Y_RNA.478-201ENST00000384358 107 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 MIR570-201ENST00000384917 97 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 MIR548A2-201ENST00000384956 97 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 MIR520G-201ENST00000385064 90 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 SNORD28B-201ENST00000390993 75 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 AL606845.1-201ENST00000404881 255 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 Y_RNA.618-201ENST00000410949 107 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.67□□□□□ -2.3
CDX2Q99626 SNORD124-201ENST00000459577 104 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 RNU6-1007P-201ENST00000516586 107 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 SNORD45.4-201ENST00000516629 73 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 RNU7-149P-201ENST00000516739 59 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 AP003716.2-201ENST00000528260 108 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 AC037487.3-201ENST00000606668 112 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 AL096861.1-201ENST00000610899 123 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 AL391903.3-201ENST00000612158 163 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 Y_RNA.802-201ENST00000614892 130 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 U6.104-201ENST00000637979 90 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 MIR6759-201ENST00000638110 65 ntBASIC0.67□□□□□ -2.3
CDX2Q99626 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CDX2Q99626 RNU6-833P-201ENST00000363486 107 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 SNORD45.3-201ENST00000363836 72 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 RNU6-268P-201ENST00000364174 107 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 U8.5-201ENST00000364528 136 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 SNORA1-201ENST00000384107 130 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 Y_RNA.489-201ENST00000384410 101 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 SNORA8.3-201ENST00000384679 139 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 Y_RNA.571-201ENST00000384753 98 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 MIR100-201ENST00000385259 80 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 RNU6-938P-201ENST00000411285 103 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 Y_RNA.644-201ENST00000459006 113 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms