Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 MIR3618-201ENST00000580330 88 ntBASIC1.84□□□□□ -2.11
PNKPQ96T60 FAM106DP-201ENST00000586416 501 ntBASIC1.84□□□□□ -2.11
PNKPQ96T60 AC108081.1-201ENST00000604358 221 ntBASIC1.84□□□□□ -2.11
PNKPQ96T60 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
PNKPQ96T60 MIR342-201ENST00000362212 99 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 RNU6-1123P-201ENST00000362347 106 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 RNU6-1290P-201ENST00000362957 109 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 RNU6-414P-201ENST00000363705 104 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 Y_RNA.351-201ENST00000365436 96 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 SNORA17.3-201ENST00000391159 129 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 MIR1267-201ENST00000408723 78 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 RPS26P48-201ENST00000491713 339 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 AC090049.2-201ENST00000550377 109 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 MIR4299-201ENST00000577899 72 ntBASIC1.83□□□□□ -2.12
PNKPQ96T60 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.83□□□□□ -2.12
PNKPQ96T60 RNA5SP205-201ENST00000364653 136 ntBASIC1.82□□□□□ -2.12
PNKPQ96T60 SNORA27-201ENST00000384323 126 ntBASIC1.82□□□□□ -2.12
PNKPQ96T60 SNORA40.5-201ENST00000391061 128 ntBASIC1.82□□□□□ -2.12
PNKPQ96T60 SNX2P2-201ENST00000424553 323 ntBASIC1.82□□□□□ -2.12
PNKPQ96T60 RPL23AP6-201ENST00000446637 472 ntBASIC1.82□□□□□ -2.12
PNKPQ96T60 RNA5SP233-201ENST00000459153 113 ntBASIC1.82□□□□□ -2.12
PNKPQ96T60 RNU6-772P-201ENST00000516042 105 ntBASIC1.82□□□□□ -2.12
PNKPQ96T60 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.82□□□□□ -2.12
PNKPQ96T60 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.82□□□□□ -2.12
PNKPQ96T60 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PNKPQ96T60 SNORD28B-201ENST00000390993 75 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 AL161935.2-201ENST00000414627 60 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 JTBP1-201ENST00000441314 247 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 SNORD123-201ENST00000459473 70 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 RNU6-917P-201ENST00000516294 104 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 RNU6-1061P-201ENST00000516530 99 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 RNU7-70P-201ENST00000516941 66 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 AC090821.2-201ENST00000523552 176 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 IGKV1-22-201ENST00000524313 326 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 AC133485.4-201ENST00000561835 220 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 AC138907.4-201ENST00000570107 226 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 MIR548AR-201ENST00000582191 57 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 MIR502-201ENST00000606349 86 ntBASIC1.81□□□□□ -2.12
PNKPQ96T60 RNU6-647P-201ENST00000364243 107 ntBASIC1.8□□□□□ -2.12
PNKPQ96T60 Y_RNA.370-201ENST00000365589 108 ntBASIC1.8□□□□□ -2.12
PNKPQ96T60 RNU6-735P-201ENST00000410612 107 ntBASIC1.8□□□□□ -2.12
PNKPQ96T60 Y_RNA.630-201ENST00000411370 108 ntBASIC1.8□□□□□ -2.12
PNKPQ96T60 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.8□□□□□ -2.12
PNKPQ96T60 RNU6-781P-201ENST00000516377 101 ntBASIC1.8□□□□□ -2.12
PNKPQ96T60 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
PNKPQ96T60 AL359881.1-201ENST00000602916 267 ntBASIC1.8□□□□□ -2.12
PNKPQ96T60 AC091932.4-201ENST00000623386 200 ntBASIC1.8□□□□□ -2.12
PNKPQ96T60 AL596211.1-201ENST00000569873 2277 ntBASIC1.8□□□□□ -2.12
PNKPQ96T60 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PNKPQ96T60 SNORD115-34-201ENST00000362441 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-12-201ENST00000362583 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-29-201ENST00000362834 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-9-201ENST00000362912 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-21-201ENST00000362963 81 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-14-201ENST00000363090 81 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-13-201ENST00000363358 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-41-201ENST00000363608 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-11-201ENST00000363616 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-5-201ENST00000363633 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-39-201ENST00000363694 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-4-201ENST00000363810 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-16-201ENST00000363887 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-6-201ENST00000363942 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-42-201ENST00000364273 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-15-201ENST00000364809 81 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 RNU1-133P-201ENST00000364867 167 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-1-201ENST00000364961 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-26-201ENST00000365067 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-10-201ENST00000365073 81 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-43-201ENST00000365503 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 RNA5SP259-201ENST00000365541 109 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-36-201ENST00000365629 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 MIR570-201ENST00000384917 97 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PNKPQ96T60 Y_RNA.617-201ENST00000410920 90 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.79□□□□□ -2.12
PNKPQ96T60 AC108729.3-201ENST00000513484 108 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 RN7SKP19-201ENST00000516016 252 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 RNU6-240P-201ENST00000516098 97 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 Y_RNA.676-201ENST00000516393 96 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 MIR4498-201ENST00000577599 66 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 SNORD115-40-201ENST00000606510 82 ntBASIC1.79□□□□□ -2.12
PNKPQ96T60 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
PNKPQ96T60 MIR378A-201ENST00000362177 66 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 RNU6-349P-201ENST00000362402 107 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 RNU6-661P-201ENST00000362409 107 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 Y_RNA.366-201ENST00000365540 102 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 MIR513A1-201ENST00000385138 129 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 SNORA67.5-201ENST00000391036 107 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 RNU7-80P-201ENST00000459562 61 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 RPS29P24-201ENST00000486345 171 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 SNORA31.4-201ENST00000516049 129 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 RN7SKP179-201ENST00000516126 217 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 SNORA77B-201ENST00000578179 125 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 HSPE1P19-201ENST00000603327 295 ntBASIC1.78□□□□□ -2.12
PNKPQ96T60 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PNKPQ96T60 SNORA1.2-201ENST00000365189 134 ntBASIC1.77□□□□□ -2.13
PNKPQ96T60 SNORD58C-201ENST00000365223 64 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 299.1 ms