Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 AL513423.1-201ENST00000621695 132 ntBASIC2.18□□□□□ -2.06
ZSWIM3Q96MP5 AL596211.1-201ENST00000569873 2277 ntBASIC2.17□□□□□ -2.06
ZSWIM3Q96MP5 AL589743.1-201ENST00000551932 2712 ntBASIC2.17□□□□□ -2.06
ZSWIM3Q96MP5 RNU6-1014P-201ENST00000383940 103 ntBASIC2.17□□□□□ -2.06
ZSWIM3Q96MP5 MIR452-201ENST00000385020 85 ntBASIC2.17□□□□□ -2.06
ZSWIM3Q96MP5 RNU6-295P-201ENST00000516901 104 ntBASIC2.17□□□□□ -2.06
ZSWIM3Q96MP5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.17□□□□□ -2.06
ZSWIM3Q96MP5 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.17□□□□□ -2.06
ZSWIM3Q96MP5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.17□□□□□ -2.06
ZSWIM3Q96MP5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
ZSWIM3Q96MP5 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 SNORA24-201ENST00000384096 131 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 RNU6-1104P-201ENST00000384723 104 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 U8.17-201ENST00000391292 132 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 RNA5SP144-201ENST00000410846 116 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 RPL39P34-201ENST00000477141 156 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 RNU2-13P-201ENST00000515909 113 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 RNA5SP481-201ENST00000516814 122 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 AC022523.2-201ENST00000561045 150 ntBASIC2.16□□□□□ -2.06
ZSWIM3Q96MP5 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 MIR548D2-201ENST00000384955 97 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 MIR660-201ENST00000385235 97 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 snoU13.27-201ENST00000459278 104 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 RNU7-12P-201ENST00000516030 62 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 RNU7-181P-201ENST00000517234 74 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-537P-201ENST00000517277 103 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 MIR3163-201ENST00000581592 73 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 HSPE1P19-201ENST00000603327 295 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.15□□□□□ -2.07
ZSWIM3Q96MP5 SNORA63.5-201ENST00000363548 123 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-414P-201ENST00000363705 104 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 U8.6-201ENST00000364939 135 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 Y_RNA.344-201ENST00000365381 112 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 Y_RNA.348-201ENST00000365403 103 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-756P-201ENST00000383997 107 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 MIR1267-201ENST00000408723 78 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 RNA5SP100-201ENST00000410903 110 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 RNA5SP59-201ENST00000410922 110 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 RNA5SP450-201ENST00000411206 102 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 Y_RNA.677-201ENST00000516401 85 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 SNORA31.25-201ENST00000517242 134 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 AC106754.2-201ENST00000623006 233 ntBASIC2.14□□□□□ -2.07
ZSWIM3Q96MP5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-640P-201ENST00000363693 105 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 RNU4-16P-201ENST00000364737 141 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 SNORA1.2-201ENST00000365189 134 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-905P-201ENST00000384434 107 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 MIR759-201ENST00000390224 91 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 SNORA26.9-201ENST00000391322 122 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 MIR1302-5-201ENST00000408164 150 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 SNX2P2-201ENST00000424553 323 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 MIR4709-201ENST00000577272 72 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 MIR5009-201ENST00000578736 100 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 AC021613.1-201ENST00000623880 111 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 MIR6841-201ENST00000637129 72 ntBASIC2.13□□□□□ -2.07
ZSWIM3Q96MP5 MIR526A1-201ENST00000384897 85 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 MIR136-201ENST00000385207 82 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 POLR2J4-204ENST00000418424 324 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 RNU2-11P-201ENST00000459191 187 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 RNU7-34P-201ENST00000459394 64 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 RPS23P4-201ENST00000487908 423 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 AC068339.1-201ENST00000526965 141 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 SNRPGP19-201ENST00000603826 189 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 U1.36-201ENST00000620684 176 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 MIR4679-1-201ENST00000637619 75 ntBASIC2.12□□□□□ -2.07
ZSWIM3Q96MP5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 MIR424-201ENST00000362227 98 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 SNORD115-19-201ENST00000363098 82 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 SNORD115-18-201ENST00000363293 82 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 SNORD115-17-201ENST00000364612 82 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 SNORA51.5-201ENST00000384126 131 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 SNORA70.7-201ENST00000384159 133 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 MIR516B2-201ENST00000385190 85 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 SNORA40.18-201ENST00000391200 128 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 PGBD4P5-201ENST00000445958 426 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 AC090255.1-201ENST00000495779 349 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 AP001318.4-201ENST00000616637 121 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ZSWIM3Q96MP5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 Y_RNA.78-201ENST00000362970 110 ntBASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-1319P-201ENST00000390855 104 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms