Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 TRMT112P2-201ENST00000512910 132 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 RNA5SP236-201ENST00000516169 116 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 RNU7-25P-201ENST00000516544 62 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 RNU7-28P-201ENST00000516759 62 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 MIR3198-2-201ENST00000577868 80 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 MIR4713-201ENST00000582691 75 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 AC006441.5-201ENST00000612680 209 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 MIR376A2-201ENST00000636782 80 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.547-201ENST00000384654 119 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 MIR499A-201ENST00000384903 122 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 MIR548A3-201ENST00000385297 97 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 SNORA31.10-201ENST00000516482 106 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 AL670379.3-201ENST00000605040 251 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 MIR8070-201ENST00000616510 88 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 AC134878.1-201ENST00000619901 243 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 AL121890.5-201ENST00000620848 304 ntBASIC1.77□□□□□ -2.13
VCPIP1Q96JH7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 SNORD115-28-201ENST00000363931 81 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 RNU6-153P-201ENST00000364422 104 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 SNORA2.2-201ENST00000365473 135 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 SNORA22-201ENST00000383907 134 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 RNU6-1189P-201ENST00000383958 107 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 RNU6-163P-201ENST00000384396 106 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 MIR934-201ENST00000401241 83 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 MIR1263-201ENST00000408324 86 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 SNRPGP14-201ENST00000435400 219 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 AC114811.1-201ENST00000507207 168 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 PDCD5P2-201ENST00000507570 312 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 SCARNA15-202ENST00000516881 127 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.709-201ENST00000516952 92 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 IGKV1-22-201ENST00000524313 326 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 AC025166.1-201ENST00000612411 163 ntBASIC1.76□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.346-201ENST00000365385 112 ntBASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 AP1B1P2-201ENST00000416196 106 ntBASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 AC069257.2-201ENST00000441819 155 ntBASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 MIR5197-201ENST00000583721 112 ntBASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 SNORA28-201ENST00000606769 126 ntBASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 AC015726.2-201ENST00000620112 122 ntBASIC1.75□□□□□ -2.13
VCPIP1Q96JH7 SNORA25.9-201ENST00000365087 128 ntBASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 SNORD116-21-201ENST00000384507 92 ntBASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 MIR548A1-201ENST00000385041 97 ntBASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 RN7SKP200-201ENST00000410564 320 ntBASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.649-201ENST00000459077 103 ntBASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 RNU6-589P-201ENST00000516485 107 ntBASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 SNORD36C-201ENST00000516733 66 ntBASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 MTND5P18-201ENST00000445624 1801 ntBASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.73□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.366-201ENST00000365540 102 ntBASIC1.73□□□□□ -2.13
VCPIP1Q96JH7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
VCPIP1Q96JH7 HMGN2P32-201ENST00000444648 269 ntBASIC1.73□□□□□ -2.13
VCPIP1Q96JH7 RNU7-70P-201ENST00000516941 66 ntBASIC1.73□□□□□ -2.13
VCPIP1Q96JH7 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
VCPIP1Q96JH7 AC103810.8-201ENST00000607347 118 ntBASIC1.73□□□□□ -2.13
VCPIP1Q96JH7 MIRLET7C-201ENST00000362160 84 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.35-201ENST00000362601 101 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 SNORD38C-201ENST00000384381 69 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 Y_RNA.528-201ENST00000384575 108 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 MIRLET7F2-201ENST00000385277 83 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 SNORA67.5-201ENST00000391036 107 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 AL034345.1-201ENST00000407768 123 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 RNU6-938P-201ENST00000411285 103 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 CALM2P4-201ENST00000430810 426 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 snoU13.27-201ENST00000459278 104 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 CYCTP-201ENST00000504253 315 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 RNU6-240P-201ENST00000516098 97 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 RNU6-113P-201ENST00000516653 101 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 SNORA18.7-201ENST00000516910 131 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 AP003484.1-201ENST00000530974 250 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 MIR4303-201ENST00000581299 66 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 AL137067.1-201ENST00000615933 120 ntBASIC1.72□□□□□ -2.13
VCPIP1Q96JH7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
VCPIP1Q96JH7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
VCPIP1Q96JH7 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
VCPIP1Q96JH7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.71□□□□□ -2.14
VCPIP1Q96JH7 U8.16-201ENST00000391279 133 ntBASIC1.71□□□□□ -2.14
VCPIP1Q96JH7 RNU7-34P-201ENST00000459394 64 ntBASIC1.71□□□□□ -2.14
VCPIP1Q96JH7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.71□□□□□ -2.14
VCPIP1Q96JH7 RNA5SP481-201ENST00000516814 122 ntBASIC1.71□□□□□ -2.14
VCPIP1Q96JH7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.71□□□□□ -2.14
VCPIP1Q96JH7 AC095038.3-201ENST00000634439 195 ntBASIC1.71□□□□□ -2.14
VCPIP1Q96JH7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms