Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 RNU7-41P-201ENST00000515917 61 ntBASIC2.57□□□□□ -2
CCDC97Q96F63 SNORD33.1-201ENST00000516213 88 ntBASIC2.57□□□□□ -2
CCDC97Q96F63 RNA5SP282-201ENST00000516355 108 ntBASIC2.57□□□□□ -2
CCDC97Q96F63 AC019176.1-201ENST00000518519 225 ntBASIC2.57□□□□□ -2
CCDC97Q96F63 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.57□□□□□ -2
CCDC97Q96F63 DNAJC19P9-201ENST00000555084 351 ntBASIC2.57□□□□□ -2
CCDC97Q96F63 MIR4251-201ENST00000635819 61 ntBASIC2.57□□□□□ -2
CCDC97Q96F63 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
CCDC97Q96F63 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CCDC97Q96F63 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.56□□□□□ -2
CCDC97Q96F63 ZNF658B-202ENST00000615961 3375 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 RNU6-834P-201ENST00000362367 110 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 SNORD33-201ENST00000362761 85 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 Y_RNA.353-201ENST00000365440 108 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 Y_RNA.528-201ENST00000384575 108 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 RNA5SP261-201ENST00000410536 106 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.56□□□□□ -2
CCDC97Q96F63 MIR514B-201ENST00000516774 80 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 MIR3152-201ENST00000579801 74 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 AL020996.3-201ENST00000606617 222 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 MTND5P18-201ENST00000445624 1801 ntBASIC2.56□□□□□ -2
CCDC97Q96F63 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC97Q96F63 Y_RNA.298-201ENST00000364960 107 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 SNORA67.4-201ENST00000384688 142 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 RNU6-1319P-201ENST00000390855 104 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 RNU6-747P-201ENST00000390928 104 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 RNU6-241P-201ENST00000391148 104 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 RNA5SP425-201ENST00000410336 112 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 RNU6-1190P-201ENST00000410811 104 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 RNU6-177P-201ENST00000411257 104 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 AC090255.1-201ENST00000495779 349 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.55□□□□□ -2
CCDC97Q96F63 AL359851.1-201ENST00000569460 4997 ntBASIC2.55□□□□□ -2
CCDC97Q96F63 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC97Q96F63 RNU6-1056P-201ENST00000383996 107 ntBASIC2.54□□□□□ -2
CCDC97Q96F63 RNU4-52P-201ENST00000384209 138 ntBASIC2.54□□□□□ -2
CCDC97Q96F63 RNA5SP144-201ENST00000410846 116 ntBASIC2.54□□□□□ -2
CCDC97Q96F63 snoU13.15-201ENST00000459407 104 ntBASIC2.54□□□□□ -2
CCDC97Q96F63 COX6CP6-201ENST00000490840 228 ntBASIC2.54□□□□□ -2
CCDC97Q96F63 RNU7-123P-201ENST00000515911 60 ntBASIC2.54□□□□□ -2
CCDC97Q96F63 RNA5SP320-201ENST00000516263 124 ntBASIC2.54□□□□□ -2
CCDC97Q96F63 MTND5P34-201ENST00000568888 325 ntBASIC2.54□□□□□ -2
CCDC97Q96F63 MIR3937-201ENST00000580135 106 ntBASIC2.54□□□□□ -2
CCDC97Q96F63 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.54□□□□□ -2
CCDC97Q96F63 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.54□□□□□ -2
CCDC97Q96F63 RNA5SP48-201ENST00000363969 126 ntBASIC2.53□□□□□ -2
CCDC97Q96F63 RNU6-1065P-201ENST00000384513 106 ntBASIC2.53□□□□□ -2
CCDC97Q96F63 RNU6-1064P-201ENST00000410626 104 ntBASIC2.53□□□□□ -2
CCDC97Q96F63 AL022718.1-201ENST00000412004 84 ntBASIC2.53□□□□□ -2
CCDC97Q96F63 MIR4769-201ENST00000584126 77 ntBASIC2.53□□□□□ -2
CCDC97Q96F63 AL670379.3-201ENST00000605040 251 ntBASIC2.53□□□□□ -2
CCDC97Q96F63 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.53□□□□□ -2
CCDC97Q96F63 AL121890.5-201ENST00000620848 304 ntBASIC2.53□□□□□ -2
CCDC97Q96F63 RNU6-476P-201ENST00000384726 107 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 SNORA26.6-201ENST00000391256 115 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 RNA5SP489-201ENST00000410986 109 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 HMGN2P38-201ENST00000423806 265 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 AC079804.2-201ENST00000490376 200 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 AC008834.1-201ENST00000511612 175 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 RNU2-35P-201ENST00000516446 142 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 AL096861.1-201ENST00000610899 123 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 MIR6717-201ENST00000622747 73 ntBASIC2.52□□□□□ -2.01
CCDC97Q96F63 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC97Q96F63 MIR548A3-201ENST00000385297 97 ntBASIC2.51□□□□□ -2.01
CCDC97Q96F63 AL359511.1-201ENST00000402970 211 ntBASIC2.51□□□□□ -2.01
CCDC97Q96F63 RPL39P39-201ENST00000455840 151 ntBASIC2.51□□□□□ -2.01
CCDC97Q96F63 RNU6-893P-201ENST00000458841 100 ntBASIC2.51□□□□□ -2.01
CCDC97Q96F63 RNU6-947P-201ENST00000516264 106 ntBASIC2.51□□□□□ -2.01
CCDC97Q96F63 IGKV3-31-201ENST00000523109 329 ntBASIC2.51□□□□□ -2.01
CCDC97Q96F63 MIR3192-201ENST00000584920 77 ntBASIC2.51□□□□□ -2.01
CCDC97Q96F63 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.51□□□□□ -2.01
CCDC97Q96F63 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC97Q96F63 SNORA1.1-201ENST00000364671 133 ntBASIC2.5□□□□□ -2.01
CCDC97Q96F63 RNU6-1144P-201ENST00000384247 104 ntBASIC2.5□□□□□ -2.01
CCDC97Q96F63 SNORA3.2-201ENST00000408221 125 ntBASIC2.5□□□□□ -2.01
CCDC97Q96F63 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.5□□□□□ -2.01
CCDC97Q96F63 RNU4-53P-201ENST00000410828 140 ntBASIC2.5□□□□□ -2.01
CCDC97Q96F63 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC97Q96F63 POLR2J4-204ENST00000418424 324 ntBASIC2.5□□□□□ -2.01
CCDC97Q96F63 AL356320.1-201ENST00000429616 163 ntBASIC2.5□□□□□ -2.01
CCDC97Q96F63 HMGN1P33-201ENST00000432945 451 ntBASIC2.5□□□□□ -2.01
CCDC97Q96F63 AC027119.1-201ENST00000440877 241 ntBASIC2.5□□□□□ -2.01
CCDC97Q96F63 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC97Q96F63 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CCDC97Q96F63 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC97Q96F63 SNORA22.1-201ENST00000362701 134 ntBASIC2.49□□□□□ -2.01
CCDC97Q96F63 MIR27B-201ENST00000385129 97 ntBASIC2.49□□□□□ -2.01
CCDC97Q96F63 RNA5SP281-201ENST00000516504 135 ntBASIC2.49□□□□□ -2.01
CCDC97Q96F63 MIR548AO-201ENST00000579992 96 ntBASIC2.49□□□□□ -2.01
CCDC97Q96F63 MIR3935-201ENST00000583472 104 ntBASIC2.49□□□□□ -2.01
CCDC97Q96F63 SNRPGP19-201ENST00000603826 189 ntBASIC2.49□□□□□ -2.01
CCDC97Q96F63 MIR8055-201ENST00000610739 97 ntBASIC2.49□□□□□ -2.01
CCDC97Q96F63 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC97Q96F63 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC97Q96F63 MIR6841-201ENST00000637129 72 ntBASIC2.49□□□□□ -2.01
CCDC97Q96F63 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC97Q96F63 Y_RNA.213-201ENST00000364178 111 ntBASIC2.48□□□□□ -2.01
CCDC97Q96F63 AC009474.2-201ENST00000451383 136 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms