Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 RPS12P2-201ENST00000439728 269 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 AC245047.7-201ENST00000440265 293 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 SNORD109B-201ENST00000458961 67 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 SNORD109A-201ENST00000459128 67 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 RNU6-65P-201ENST00000516332 98 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 RNU7-43P-201ENST00000516554 64 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-CQ95604 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 SUB1P4-201ENST00000566062 339 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 RNU6-86P-201ENST00000606534 107 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-CQ95604 SNORD114-10-201ENST00000363409 72 ntBASIC3.16□□□□□ -1.9
HLA-CQ95604 Y_RNA.247-201ENST00000364500 92 ntBASIC3.16□□□□□ -1.9
HLA-CQ95604 RNU1-91P-201ENST00000364746 163 ntBASIC3.16□□□□□ -1.9
HLA-CQ95604 RNU6-865P-201ENST00000364772 107 ntBASIC3.16□□□□□ -1.9
HLA-CQ95604 MIR526A1-201ENST00000384897 85 ntBASIC3.16□□□□□ -1.9
HLA-CQ95604 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-CQ95604 RPL23AP6-201ENST00000446637 472 ntBASIC3.16□□□□□ -1.9
HLA-CQ95604 AC093850.1-201ENST00000454121 251 ntBASIC3.16□□□□□ -1.9
HLA-CQ95604 snoU13.27-201ENST00000459278 104 ntBASIC3.16□□□□□ -1.9
HLA-CQ95604 SNORA74.3-201ENST00000517108 154 ntBASIC3.16□□□□□ -1.9
HLA-CQ95604 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HLA-CQ95604 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-CQ95604 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-CQ95604 MIR424-201ENST00000362227 98 ntBASIC3.15□□□□□ -1.91
HLA-CQ95604 RNU6-1125P-201ENST00000363601 107 ntBASIC3.15□□□□□ -1.91
HLA-CQ95604 MIR597-201ENST00000384968 97 ntBASIC3.15□□□□□ -1.91
HLA-CQ95604 RNU7-26P-201ENST00000458980 63 ntBASIC3.15□□□□□ -1.91
HLA-CQ95604 RNA5SP24-201ENST00000516478 95 ntBASIC3.15□□□□□ -1.91
HLA-CQ95604 MIR8065-201ENST00000620577 100 ntBASIC3.15□□□□□ -1.91
HLA-CQ95604 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-CQ95604 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-CQ95604 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-CQ95604 U8.2-201ENST00000363156 134 ntBASIC3.14□□□□□ -1.91
HLA-CQ95604 Y_RNA.567-201ENST00000384736 106 ntBASIC3.14□□□□□ -1.91
HLA-CQ95604 MIR548G-201ENST00000408442 89 ntBASIC3.14□□□□□ -1.91
HLA-CQ95604 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-CQ95604 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-CQ95604 RNU6-826P-201ENST00000516827 104 ntBASIC3.14□□□□□ -1.91
HLA-CQ95604 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-CQ95604 RNU6-90P-201ENST00000606352 106 ntBASIC3.14□□□□□ -1.91
HLA-CQ95604 AC022202.1-201ENST00000613515 211 ntBASIC3.14□□□□□ -1.91
HLA-CQ95604 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-CQ95604 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-CQ95604 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HLA-CQ95604 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-CQ95604 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-CQ95604 RNU6-342P-201ENST00000384521 104 ntBASIC3.13□□□□□ -1.91
HLA-CQ95604 Z96811.1-201ENST00000445880 108 ntBASIC3.13□□□□□ -1.91
HLA-CQ95604 snoU13.15-201ENST00000459407 104 ntBASIC3.13□□□□□ -1.91
HLA-CQ95604 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-CQ95604 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-CQ95604 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HLA-CQ95604 RNU6-112P-201ENST00000363599 104 ntBASIC3.12□□□□□ -1.91
HLA-CQ95604 MIR34C-201ENST00000384831 77 ntBASIC3.12□□□□□ -1.91
HLA-CQ95604 AL023284.1-201ENST00000403956 276 ntBASIC3.12□□□□□ -1.91
HLA-CQ95604 RNU6-602P-201ENST00000411155 105 ntBASIC3.12□□□□□ -1.91
HLA-CQ95604 AC099513.1-201ENST00000490423 301 ntBASIC3.12□□□□□ -1.91
HLA-CQ95604 Y_RNA.676-201ENST00000516393 96 ntBASIC3.12□□□□□ -1.91
HLA-CQ95604 RNA5SP437-201ENST00000517249 129 ntBASIC3.12□□□□□ -1.91
HLA-CQ95604 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-CQ95604 SNORD53-201ENST00000579969 78 ntBASIC3.12□□□□□ -1.91
HLA-CQ95604 SNORA50A-202ENST00000629536 136 ntBASIC3.12□□□□□ -1.91
HLA-CQ95604 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-CQ95604 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-CQ95604 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-CQ95604 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-CQ95604 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-CQ95604 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-CQ95604 RNU6-776P-201ENST00000364403 104 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 RNU6-1022P-201ENST00000365049 104 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 RNU6-296P-201ENST00000384608 107 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 MIR518A2-201ENST00000384966 87 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 Y_RNA.609-201ENST00000410669 89 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 HMGN1P33-201ENST00000432945 451 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 HMGN2P3-201ENST00000433603 273 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 HMGN2P5-201ENST00000436882 273 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 RNVU1-2-201ENST00000516326 135 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 SNORD14A-201ENST00000606526 91 ntBASIC3.11□□□□□ -1.91
HLA-CQ95604 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-CQ95604 Y_RNA.98-201ENST00000363109 102 ntBASIC3.1□□□□□ -1.91
HLA-CQ95604 SNORA38-201ENST00000363946 132 ntBASIC3.1□□□□□ -1.91
HLA-CQ95604 RNU6-652P-201ENST00000365488 107 ntBASIC3.1□□□□□ -1.91
HLA-CQ95604 Y_RNA.448-201ENST00000384185 108 ntBASIC3.1□□□□□ -1.91
HLA-CQ95604 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
HLA-CQ95604 RNU7-79P-201ENST00000516082 62 ntBASIC3.1□□□□□ -1.91
HLA-CQ95604 FAM106DP-201ENST00000586416 501 ntBASIC3.1□□□□□ -1.91
HLA-CQ95604 SEPT14P17-201ENST00000617978 177 ntBASIC3.1□□□□□ -1.91
HLA-CQ95604 AC008133.2-201ENST00000624540 351 ntBASIC3.1□□□□□ -1.91
HLA-CQ95604 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-CQ95604 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-CQ95604 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-CQ95604 Y_RNA.173-201ENST00000363776 113 ntBASIC3.09□□□□□ -1.91
HLA-CQ95604 Y_RNA.316-201ENST00000365118 111 ntBASIC3.09□□□□□ -1.91
HLA-CQ95604 RNU1-51P-201ENST00000365345 176 ntBASIC3.09□□□□□ -1.91
HLA-CQ95604 RNU6-480P-201ENST00000384332 107 ntBASIC3.09□□□□□ -1.91
HLA-CQ95604 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-CQ95604 SNORD67.1-201ENST00000516618 108 ntBASIC3.09□□□□□ -1.91
HLA-CQ95604 CYP3A52P-201ENST00000563326 91 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms