Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
ATP2A3Q93084 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.71□□□□□ -2.14
ATP2A3Q93084 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
ATP2A3Q93084 RNU6-888P-201ENST00000363010 101 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 Y_RNA.116-201ENST00000363292 103 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 RNU6-309P-201ENST00000364573 106 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 SNORD77.3-201ENST00000391113 65 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 RNU1-78P-201ENST00000391248 165 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 MIR891A-201ENST00000401237 79 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.7□□□□□ -2.14
ATP2A3Q93084 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.7□□□□□ -2.14
ATP2A3Q93084 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.7□□□□□ -2.14
ATP2A3Q93084 snoU13.18-201ENST00000459483 104 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 RNU6-659P-201ENST00000516454 104 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 RNU6-62P-201ENST00000516526 102 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 RNU7-25P-201ENST00000516544 62 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 RNU6-365P-201ENST00000517113 106 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 AC131055.1-201ENST00000584626 316 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 U7.2-201ENST00000607576 63 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 AL512598.1-201ENST00000610158 273 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 WWP1P1-201ENST00000466609 2769 ntBASIC1.7□□□□□ -2.14
ATP2A3Q93084 RNU6-833P-201ENST00000363486 107 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 SNORD1A-201ENST00000364968 72 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 Y_RNA.336-201ENST00000365307 109 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 RNU6-442P-201ENST00000383968 104 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 AC004965.1-201ENST00000413033 213 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 AF228730.3-201ENST00000436691 102 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 AC008267.6-201ENST00000441664 139 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 Y_RNA.651-201ENST00000459380 103 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 RNU6-693P-201ENST00000516134 107 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
ATP2A3Q93084 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ATP2A3Q93084 RNU6-268P-201ENST00000364174 107 ntBASIC1.68□□□□□ -2.14
ATP2A3Q93084 RNU6-80P-201ENST00000384195 107 ntBASIC1.68□□□□□ -2.14
ATP2A3Q93084 MIR489-201ENST00000384923 84 ntBASIC1.68□□□□□ -2.14
ATP2A3Q93084 MIR624-201ENST00000385217 97 ntBASIC1.68□□□□□ -2.14
ATP2A3Q93084 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ATP2A3Q93084 MIR548O-201ENST00000408583 114 ntBASIC1.68□□□□□ -2.14
ATP2A3Q93084 RNA5SP127-201ENST00000411051 133 ntBASIC1.68□□□□□ -2.14
ATP2A3Q93084 RNA5SP236-201ENST00000516169 116 ntBASIC1.68□□□□□ -2.14
ATP2A3Q93084 AC019176.1-201ENST00000518519 225 ntBASIC1.68□□□□□ -2.14
ATP2A3Q93084 TUG1_4.1-201ENST00000619464 181 ntBASIC1.68□□□□□ -2.14
ATP2A3Q93084 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.68□□□□□ -2.14
ATP2A3Q93084 Y_RNA.120-201ENST00000363304 110 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 SNORD24-201ENST00000383884 75 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 MIR194-1-201ENST00000384892 85 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 SNORA26-201ENST00000391286 122 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 RNU6-938P-201ENST00000411285 103 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 Y_RNA.630-201ENST00000411370 108 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 SNRPGP13-201ENST00000442212 177 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 AC079140.2-201ENST00000506193 142 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 RNU4-57P-201ENST00000515980 135 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 RNU6-772P-201ENST00000516042 105 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 RNU6-504P-201ENST00000516568 104 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 SCARNA15-202ENST00000516881 127 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 IGKV1-22-201ENST00000524313 326 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 MIR4778-201ENST00000577635 80 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 MIR3121-201ENST00000579680 77 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 AC108081.1-201ENST00000604358 221 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 AL359821.1-201ENST00000605519 182 ntBASIC1.67□□□□□ -2.14
ATP2A3Q93084 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ATP2A3Q93084 AL442644.1-201ENST00000454390 3105 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 MIR539-201ENST00000365690 78 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 SNORA40.5-201ENST00000391061 128 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 AL161935.2-201ENST00000414627 60 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 AC093850.1-201ENST00000454121 251 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 RNU6-781P-201ENST00000516377 101 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 SNORA18.4-201ENST00000516440 124 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 Y_RNA.690-201ENST00000516603 95 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 SNORD36C-201ENST00000516733 66 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 SUMO2P16-201ENST00000519475 264 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 AC006441.5-201ENST00000612680 209 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.66□□□□□ -2.14
ATP2A3Q93084 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ATP2A3Q93084 Y_RNA.114-201ENST00000363265 113 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 RNA5SP259-201ENST00000365541 109 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 SNORD20-201ENST00000384550 80 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 Y_RNA.547-201ENST00000384654 119 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 MIR452-201ENST00000385020 85 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 MIR513A1-201ENST00000385138 129 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 RNU7-95P-201ENST00000459222 64 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 RNU6-1149P-201ENST00000516810 97 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 MIR3937-201ENST00000580135 106 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 BX248123.2-201ENST00000606318 124 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 AP000648.3-201ENST00000623539 4507 ntBASIC1.65□□□□□ -2.15
ATP2A3Q93084 Y_RNA.224-201ENST00000364308 111 ntBASIC1.64□□□□□ -2.15
ATP2A3Q93084 SNORD38C-201ENST00000384381 69 ntBASIC1.64□□□□□ -2.15
ATP2A3Q93084 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
ATP2A3Q93084 RNU5E-3P-201ENST00000515913 68 ntBASIC1.64□□□□□ -2.15
ATP2A3Q93084 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ATP2A3Q93084 MIR302D-201ENST00000362275 68 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 RNU1-42P-201ENST00000364033 160 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 RNU6-60P-201ENST00000364792 103 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 RNU6-215P-201ENST00000365169 102 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 RNU6-429P-201ENST00000384582 108 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 MIR517C-201ENST00000385103 95 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms