Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SNORD115-1-201ENST00000364961 82 ntBASIC4.43□□□□□ -1.7
TRIM41Q8WV44 SNORD115-26-201ENST00000365067 82 ntBASIC4.43□□□□□ -1.7
TRIM41Q8WV44 SNORD115-10-201ENST00000365073 81 ntBASIC4.43□□□□□ -1.7
TRIM41Q8WV44 SNORD115-43-201ENST00000365503 82 ntBASIC4.43□□□□□ -1.7
TRIM41Q8WV44 SNORD115-36-201ENST00000365629 82 ntBASIC4.43□□□□□ -1.7
TRIM41Q8WV44 IGLV3-17-201ENST00000519099 244 ntBASIC4.43□□□□□ -1.7
TRIM41Q8WV44 MIR8054-201ENST00000620877 86 ntBASIC4.43□□□□□ -1.7
TRIM41Q8WV44 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM41Q8WV44 Y_RNA.221-201ENST00000364248 96 ntBASIC4.42□□□□□ -1.7
TRIM41Q8WV44 AC015922.2-201ENST00000435593 184 ntBASIC4.42□□□□□ -1.7
TRIM41Q8WV44 RNA5SP61-201ENST00000516453 100 ntBASIC4.42□□□□□ -1.7
TRIM41Q8WV44 RNA5SP33-201ENST00000516687 98 ntBASIC4.42□□□□□ -1.7
TRIM41Q8WV44 SNORA28-201ENST00000606769 126 ntBASIC4.42□□□□□ -1.7
TRIM41Q8WV44 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.42□□□□□ -1.7
TRIM41Q8WV44 AL512310.12-203ENST00000640543 90 ntBASIC4.42□□□□□ -1.7
TRIM41Q8WV44 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM41Q8WV44 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM41Q8WV44 Y_RNA.467-201ENST00000384297 102 ntBASIC4.41□□□□□ -1.7
TRIM41Q8WV44 RN7SKP123-201ENST00000410732 291 ntBASIC4.41□□□□□ -1.7
TRIM41Q8WV44 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM41Q8WV44 AL353813.1-201ENST00000440700 253 ntBASIC4.41□□□□□ -1.7
TRIM41Q8WV44 RNU6-267P-201ENST00000516714 103 ntBASIC4.41□□□□□ -1.7
TRIM41Q8WV44 Y_RNA.705-201ENST00000516862 110 ntBASIC4.41□□□□□ -1.7
TRIM41Q8WV44 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM41Q8WV44 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM41Q8WV44 Y_RNA.95-201ENST00000363079 95 ntBASIC4.4□□□□□ -1.71
TRIM41Q8WV44 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM41Q8WV44 MIR378A-201ENST00000362177 66 ntBASIC4.39□□□□□ -1.71
TRIM41Q8WV44 Y_RNA.437-201ENST00000384113 113 ntBASIC4.39□□□□□ -1.71
TRIM41Q8WV44 RNU6-1258P-201ENST00000516911 111 ntBASIC4.39□□□□□ -1.71
TRIM41Q8WV44 MIR548AE2-201ENST00000583456 67 ntBASIC4.39□□□□□ -1.71
TRIM41Q8WV44 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM41Q8WV44 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM41Q8WV44 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM41Q8WV44 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM41Q8WV44 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM41Q8WV44 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM41Q8WV44 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM41Q8WV44 RNU6-521P-201ENST00000516663 105 ntBASIC4.38□□□□□ -1.71
TRIM41Q8WV44 RNU6-295P-201ENST00000516901 104 ntBASIC4.38□□□□□ -1.71
TRIM41Q8WV44 MIR3152-201ENST00000579801 74 ntBASIC4.38□□□□□ -1.71
TRIM41Q8WV44 MIR5588-201ENST00000581890 63 ntBASIC4.38□□□□□ -1.71
TRIM41Q8WV44 AC103810.6-201ENST00000606708 136 ntBASIC4.38□□□□□ -1.71
TRIM41Q8WV44 MAPK10-362ENST00000641864 4484 ntBASIC4.38□□□□□ -1.71
TRIM41Q8WV44 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM41Q8WV44 SNORD115-35-201ENST00000365122 82 ntBASIC4.37□□□□□ -1.71
TRIM41Q8WV44 RNU6-1201P-201ENST00000384227 107 ntBASIC4.37□□□□□ -1.71
TRIM41Q8WV44 Y_RNA.470-201ENST00000384307 117 ntBASIC4.37□□□□□ -1.71
TRIM41Q8WV44 RNU6-887P-201ENST00000410660 100 ntBASIC4.37□□□□□ -1.71
TRIM41Q8WV44 RNA5SP385-201ENST00000515947 110 ntBASIC4.37□□□□□ -1.71
TRIM41Q8WV44 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM41Q8WV44 MIR3169-201ENST00000578032 83 ntBASIC4.37□□□□□ -1.71
TRIM41Q8WV44 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM41Q8WV44 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM41Q8WV44 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM41Q8WV44 SNORA22.1-201ENST00000362701 134 ntBASIC4.36□□□□□ -1.71
TRIM41Q8WV44 RNU6-675P-201ENST00000384236 104 ntBASIC4.36□□□□□ -1.71
TRIM41Q8WV44 RNU7-67P-201ENST00000459003 62 ntBASIC4.36□□□□□ -1.71
TRIM41Q8WV44 RNU6-958P-201ENST00000516995 106 ntBASIC4.36□□□□□ -1.71
TRIM41Q8WV44 MIR3616-201ENST00000584070 92 ntBASIC4.36□□□□□ -1.71
TRIM41Q8WV44 MIR4506-201ENST00000584693 77 ntBASIC4.36□□□□□ -1.71
TRIM41Q8WV44 AC096720.1-201ENST00000604441 183 ntBASIC4.36□□□□□ -1.71
TRIM41Q8WV44 AL359821.1-201ENST00000605519 182 ntBASIC4.36□□□□□ -1.71
TRIM41Q8WV44 SNORA50A-202ENST00000629536 136 ntBASIC4.36□□□□□ -1.71
TRIM41Q8WV44 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRIM41Q8WV44 MIRLET7C-201ENST00000362160 84 ntBASIC4.35□□□□□ -1.71
TRIM41Q8WV44 SNORA32-201ENST00000384072 121 ntBASIC4.35□□□□□ -1.71
TRIM41Q8WV44 RNU6-42P-201ENST00000384165 107 ntBASIC4.35□□□□□ -1.71
TRIM41Q8WV44 MIR516B2-201ENST00000385190 85 ntBASIC4.35□□□□□ -1.71
TRIM41Q8WV44 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM41Q8WV44 SNORA17.3-201ENST00000391159 129 ntBASIC4.35□□□□□ -1.71
TRIM41Q8WV44 SNORA26.7-201ENST00000391288 122 ntBASIC4.35□□□□□ -1.71
TRIM41Q8WV44 AC027279.3-201ENST00000625055 122 ntBASIC4.35□□□□□ -1.71
TRIM41Q8WV44 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM41Q8WV44 Y_RNA.313-201ENST00000365095 103 ntBASIC4.34□□□□□ -1.71
TRIM41Q8WV44 RNU7-34P-201ENST00000459394 64 ntBASIC4.34□□□□□ -1.71
TRIM41Q8WV44 RNA5SP320-201ENST00000516263 124 ntBASIC4.34□□□□□ -1.71
TRIM41Q8WV44 RNA5SP395-201ENST00000516567 118 ntBASIC4.34□□□□□ -1.71
TRIM41Q8WV44 MIR6733-201ENST00000635723 61 ntBASIC4.34□□□□□ -1.71
TRIM41Q8WV44 AL161431.1-201ENST00000618966 4205 ntBASIC4.33□□□□□ -1.72
TRIM41Q8WV44 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM41Q8WV44 RNU6-979P-201ENST00000383896 107 ntBASIC4.33□□□□□ -1.72
TRIM41Q8WV44 RNU6-787P-201ENST00000384032 107 ntBASIC4.33□□□□□ -1.72
TRIM41Q8WV44 RNU6-1319P-201ENST00000390855 104 ntBASIC4.33□□□□□ -1.72
TRIM41Q8WV44 RNU6-747P-201ENST00000390928 104 ntBASIC4.33□□□□□ -1.72
TRIM41Q8WV44 RNU6-241P-201ENST00000391148 104 ntBASIC4.33□□□□□ -1.72
TRIM41Q8WV44 RNU6-177P-201ENST00000411257 104 ntBASIC4.33□□□□□ -1.72
TRIM41Q8WV44 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM41Q8WV44 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM41Q8WV44 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TRIM41Q8WV44 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM41Q8WV44 Y_RNA.377-201ENST00000365644 108 ntBASIC4.32□□□□□ -1.72
TRIM41Q8WV44 RNY1P4-201ENST00000384595 115 ntBASIC4.32□□□□□ -1.72
TRIM41Q8WV44 U8.16-201ENST00000391279 133 ntBASIC4.32□□□□□ -1.72
TRIM41Q8WV44 RNA5SP344-201ENST00000411081 104 ntBASIC4.32□□□□□ -1.72
TRIM41Q8WV44 AC069257.2-201ENST00000441819 155 ntBASIC4.32□□□□□ -1.72
TRIM41Q8WV44 RNU7-12P-201ENST00000516030 62 ntBASIC4.32□□□□□ -1.72
TRIM41Q8WV44 RPPH1-2P-201ENST00000516688 293 ntBASIC4.32□□□□□ -1.72
TRIM41Q8WV44 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRIM41Q8WV44 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms