Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 Y_RNA.801-201ENST00000619005 101 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 AL365265.1-201ENST00000621045 234 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 Z97988.1-201ENST00000637697 135 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 U6.104-201ENST00000637979 90 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 RNU6-653P-201ENST00000363074 106 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.145-201ENST00000363527 102 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 RNU6-1228P-201ENST00000391014 107 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 RNU6-381P-201ENST00000391259 108 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 RNU2-70P-201ENST00000410718 179 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.622-201ENST00000411091 108 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 RNU7-53P-201ENST00000516705 60 ntBASIC0.63□□□□□ -2.31
CCDC197Q8NCU1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.396-201ENST00000383949 103 ntBASIC0.62□□□□□ -2.31
CCDC197Q8NCU1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.638-201ENST00000459374 113 ntBASIC0.62□□□□□ -2.31
CCDC197Q8NCU1 AL442663.2-201ENST00000554385 511 ntBASIC0.62□□□□□ -2.31
CCDC197Q8NCU1 MIR4643-201ENST00000577473 78 ntBASIC0.62□□□□□ -2.31
CCDC197Q8NCU1 MIR3973-201ENST00000579824 107 ntBASIC0.62□□□□□ -2.31
CCDC197Q8NCU1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.352-201ENST00000365439 102 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 RNU6-738P-201ENST00000384531 106 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 RNU1-119P-201ENST00000391122 165 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 SNORD83.1-201ENST00000411362 77 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 RNU7-62P-201ENST00000458856 62 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 RNU7-96P-201ENST00000459535 64 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 RNU6-998P-201ENST00000515894 101 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.679-201ENST00000516416 91 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 AC008737.2-201ENST00000599446 118 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 uc_338.6-201ENST00000613544 171 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 MIR6740-201ENST00000618268 113 ntBASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.23-201ENST00000362496 106 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.176-201ENST00000363815 109 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 RNU6-934P-201ENST00000365154 107 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 RNU4-17P-201ENST00000365598 141 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.416-201ENST00000384014 113 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 SNORD38B-201ENST00000384690 67 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 HMGN1P33-201ENST00000432945 451 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 AC011195.1-201ENST00000578177 177 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 AC011921.3-201ENST00000605540 361 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 SNORD38B-202ENST00000625943 69 ntBASIC0.6□□□□□ -2.31
CCDC197Q8NCU1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.199-201ENST00000364014 102 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 SNORA1-201ENST00000384107 130 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 SNORD77.3-201ENST00000391113 65 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 MIR548I3-201ENST00000408378 149 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 RNU6-602P-201ENST00000411155 105 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 AL358176.2-201ENST00000425769 204 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 RNU2-11P-201ENST00000459191 187 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 RNU6-113P-201ENST00000516653 101 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 MIR4771-2-201ENST00000577758 74 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 MIR4771-1-201ENST00000582617 74 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 AL359821.1-201ENST00000605519 182 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 AC108706.1-201ENST00000611053 297 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 AL442067.1-201ENST00000613261 223 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 MIR376A2-201ENST00000636782 80 ntBASIC0.59□□□□□ -2.31
CCDC197Q8NCU1 MIR337-201ENST00000362281 93 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 Y_RNA.47-201ENST00000362697 108 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 SNORA1.1-201ENST00000364671 133 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 RNU2-38P-201ENST00000410856 79 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 AC004941.2-201ENST00000427009 228 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 AC015818.7-201ENST00000428754 109 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 AC087499.7-201ENST00000441958 109 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 AL138752.1-201ENST00000452964 351 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 TRMT112P2-201ENST00000512910 132 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 RNU6-561P-201ENST00000516222 102 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
CCDC197Q8NCU1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC197Q8NCU1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC197Q8NCU1 Y_RNA.76-201ENST00000362931 109 ntBASIC0.57□□□□□ -2.32
CCDC197Q8NCU1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.57□□□□□ -2.32
CCDC197Q8NCU1 MIR573-201ENST00000384964 99 ntBASIC0.57□□□□□ -2.32
CCDC197Q8NCU1 MIR4804-201ENST00000581683 73 ntBASIC0.57□□□□□ -2.32
CCDC197Q8NCU1 MIR4769-201ENST00000584126 77 ntBASIC0.57□□□□□ -2.32
CCDC197Q8NCU1 Y_RNA.277-201ENST00000364754 102 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 RNU6-392P-201ENST00000364926 101 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 RNU6-728P-201ENST00000365375 104 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 RNU6-1011P-201ENST00000384668 107 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 MIR520F-201ENST00000384824 87 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 RNU4-43P-201ENST00000410628 137 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 RNU6-977P-201ENST00000516411 103 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 AC020891.4-201ENST00000605745 93 ntBASIC0.56□□□□□ -2.32
CCDC197Q8NCU1 MIR6835-201ENST00000621552 64 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms