Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 Y_RNA.377-201ENST00000365644 108 ntBASIC2.7□□□□□ -1.98
DEPDC4Q8N2C3 MIR577-201ENST00000385196 96 ntBASIC2.7□□□□□ -1.98
DEPDC4Q8N2C3 SNORD67-201ENST00000390833 111 ntBASIC2.7□□□□□ -1.98
DEPDC4Q8N2C3 UBL5P2-201ENST00000583788 219 ntBASIC2.7□□□□□ -1.98
DEPDC4Q8N2C3 AC007318.2-201ENST00000620999 243 ntBASIC2.7□□□□□ -1.98
DEPDC4Q8N2C3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.7□□□□□ -1.98
DEPDC4Q8N2C3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 MIR488-201ENST00000365739 83 ntBASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 RNU6-49P-201ENST00000384256 107 ntBASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 SNORA44-201ENST00000384584 132 ntBASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 MIR520C-201ENST00000385005 87 ntBASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 MIR1270-201ENST00000459320 83 ntBASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 SNORA9.3-201ENST00000516383 129 ntBASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 SNORA31.15-201ENST00000516771 132 ntBASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 AL033523.1-201ENST00000605153 153 ntBASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
DEPDC4Q8N2C3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 MIR22-201ENST00000362190 85 ntBASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 RNU6-616P-201ENST00000384353 107 ntBASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 MIR512-1-201ENST00000384913 84 ntBASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 JTBP1-201ENST00000441314 247 ntBASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 RNA5SP57-201ENST00000459463 123 ntBASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 RNU6-826P-201ENST00000516827 104 ntBASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 DEFB122-202ENST00000569013 197 ntBASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DEPDC4Q8N2C3 AL353813.1-201ENST00000440700 253 ntBASIC2.67□□□□□ -1.98
DEPDC4Q8N2C3 AC008885.1-201ENST00000514930 301 ntBASIC2.67□□□□□ -1.98
DEPDC4Q8N2C3 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
DEPDC4Q8N2C3 MIR3945-201ENST00000581853 98 ntBASIC2.67□□□□□ -1.98
DEPDC4Q8N2C3 MALAT1.1-201ENST00000618249 95 ntBASIC2.67□□□□□ -1.98
DEPDC4Q8N2C3 AL137790.1-201ENST00000634283 177 ntBASIC2.67□□□□□ -1.98
DEPDC4Q8N2C3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
DEPDC4Q8N2C3 MIR605-201ENST00000385078 83 ntBASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 RNU6-679P-201ENST00000391003 106 ntBASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 AL451046.2-201ENST00000403074 277 ntBASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 SUMO1P4-201ENST00000429430 302 ntBASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 HMGN1P33-201ENST00000432945 451 ntBASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 AC234781.5-201ENST00000508429 271 ntBASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 MIR8065-201ENST00000620577 100 ntBASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
DEPDC4Q8N2C3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
DEPDC4Q8N2C3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
DEPDC4Q8N2C3 MIR449A-201ENST00000362113 91 ntBASIC2.65□□□□□ -1.99
DEPDC4Q8N2C3 Y_RNA.96-201ENST00000363092 109 ntBASIC2.65□□□□□ -1.99
DEPDC4Q8N2C3 RNU6-851P-201ENST00000384565 107 ntBASIC2.65□□□□□ -1.99
DEPDC4Q8N2C3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.65□□□□□ -1.99
DEPDC4Q8N2C3 RNU7-35P-201ENST00000517174 62 ntBASIC2.65□□□□□ -1.99
DEPDC4Q8N2C3 MIR3605-201ENST00000583214 100 ntBASIC2.65□□□□□ -1.99
DEPDC4Q8N2C3 AL442128.1-201ENST00000615151 90 ntBASIC2.65□□□□□ -1.99
DEPDC4Q8N2C3 MIR6715A-201ENST00000615929 79 ntBASIC2.65□□□□□ -1.99
DEPDC4Q8N2C3 RNA5SP432-201ENST00000362480 116 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 RNU6-1313P-201ENST00000362622 102 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 SNORD73B-201ENST00000364394 72 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 SNORA9.2-201ENST00000365361 133 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 SNORA7.5-201ENST00000410672 110 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 RN7SKP132-201ENST00000516001 208 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 RNU6-521P-201ENST00000516663 105 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 RNU6-844P-201ENST00000517175 102 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 CYP3A52P-201ENST00000563326 91 ntBASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.64□□□□□ -1.99
DEPDC4Q8N2C3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 SNORD45B-201ENST00000364617 72 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 SNORA67.1-201ENST00000364749 141 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 Y_RNA.342-201ENST00000365352 113 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 SNORA32-201ENST00000384072 121 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 RNU6-1201P-201ENST00000384227 107 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 SNORA18-201ENST00000384416 132 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 RNU6-602P-201ENST00000411155 105 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 AC004941.2-201ENST00000427009 228 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 MIR3162-201ENST00000581818 82 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 MIR4251-201ENST00000635819 61 ntBASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
DEPDC4Q8N2C3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 SNORD115-35-201ENST00000365122 82 ntBASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 MIR513A1-201ENST00000385138 129 ntBASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 AC245047.7-201ENST00000440265 293 ntBASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 AC022254.1-201ENST00000567857 235 ntBASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 MIR3935-201ENST00000583472 104 ntBASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
DEPDC4Q8N2C3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 RNU6-170P-201ENST00000362832 104 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 RNA5SP48-201ENST00000363969 126 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 AC096720.1-201ENST00000604441 183 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms