Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU6-13P-201ENST00000384248 107 ntBASIC2.63□□□□□ -1.99
USPL1Q5W0Q7 RNU6-12P-201ENST00000384604 107 ntBASIC2.63□□□□□ -1.99
USPL1Q5W0Q7 RNU6-41P-201ENST00000384741 107 ntBASIC2.63□□□□□ -1.99
USPL1Q5W0Q7 RNU7-181P-201ENST00000517234 74 ntBASIC2.63□□□□□ -1.99
USPL1Q5W0Q7 MIR3163-201ENST00000581592 73 ntBASIC2.63□□□□□ -1.99
USPL1Q5W0Q7 RNU6-94P-201ENST00000607728 107 ntBASIC2.63□□□□□ -1.99
USPL1Q5W0Q7 SNORA67.1-201ENST00000364749 141 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 Y_RNA.323-201ENST00000365157 109 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 Y_RNA.370-201ENST00000365589 108 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 RNU6-106P-201ENST00000384405 107 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 MIR583-201ENST00000384846 75 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 SNORA48.3-201ENST00000391081 134 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 RNA5SP261-201ENST00000410536 106 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 RNA5SP100-201ENST00000410903 110 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 RNA5SP59-201ENST00000410922 110 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 SNX2P2-201ENST00000424553 323 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 AC099513.1-201ENST00000490423 301 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 RNU7-123P-201ENST00000515911 60 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 RNU6-168P-201ENST00000516189 101 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 RNU7-53P-201ENST00000516705 60 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 AL049779.4-201ENST00000604500 156 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 SNORD3E-202ENST00000627253 216 ntBASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
USPL1Q5W0Q7 MIR342-201ENST00000362212 99 ntBASIC2.61□□□□□ -1.99
USPL1Q5W0Q7 RNU6-414P-201ENST00000363705 104 ntBASIC2.61□□□□□ -1.99
USPL1Q5W0Q7 RNU6-1067P-201ENST00000384752 107 ntBASIC2.61□□□□□ -1.99
USPL1Q5W0Q7 MIR1302-5-201ENST00000408164 150 ntBASIC2.61□□□□□ -1.99
USPL1Q5W0Q7 RPL39P34-201ENST00000477141 156 ntBASIC2.61□□□□□ -1.99
USPL1Q5W0Q7 AC021613.1-201ENST00000623880 111 ntBASIC2.61□□□□□ -1.99
USPL1Q5W0Q7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
USPL1Q5W0Q7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 ZNF355P-201ENST00000427301 3216 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 Y_RNA.362-201ENST00000365518 110 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 SNORA24-201ENST00000384096 131 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 MIR516B2-201ENST00000385190 85 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 SNORA40.18-201ENST00000391200 128 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 RNA5SP144-201ENST00000410846 116 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 AL022718.1-201ENST00000412004 84 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 RNU2-19P-201ENST00000517288 84 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 MIR3152-201ENST00000579801 74 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 uc_338.28-201ENST00000612082 187 ntBASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
USPL1Q5W0Q7 AC005336.3-201ENST00000623833 2679 ntBASIC2.59□□□□□ -1.99
USPL1Q5W0Q7 RNU6-1123P-201ENST00000362347 106 ntBASIC2.59□□□□□ -1.99
USPL1Q5W0Q7 RNA5SP393-201ENST00000363423 117 ntBASIC2.59□□□□□ -1.99
USPL1Q5W0Q7 RNU6-1113P-201ENST00000384348 107 ntBASIC2.59□□□□□ -1.99
USPL1Q5W0Q7 Y_RNA.549-201ENST00000384657 102 ntBASIC2.59□□□□□ -1.99
USPL1Q5W0Q7 SNORD23.1-201ENST00000408212 104 ntBASIC2.59□□□□□ -1.99
USPL1Q5W0Q7 RNU2-11P-201ENST00000459191 187 ntBASIC2.59□□□□□ -1.99
USPL1Q5W0Q7 RNU2-13P-201ENST00000515909 113 ntBASIC2.59□□□□□ -1.99
USPL1Q5W0Q7 Y_RNA.694-201ENST00000516677 117 ntBASIC2.59□□□□□ -1.99
USPL1Q5W0Q7 Y_RNA.43-201ENST00000362670 111 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 Y_RNA.163-201ENST00000363702 113 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 Y_RNA.299-201ENST00000364973 94 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 Y_RNA.494-201ENST00000384432 111 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 Y_RNA.495-201ENST00000384435 112 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 MIR548D2-201ENST00000384955 97 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 RNU6-1319P-201ENST00000390855 104 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 RNU6-747P-201ENST00000390928 104 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 RNU6-241P-201ENST00000391148 104 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 RNU6-554P-201ENST00000410466 106 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 RNU6-177P-201ENST00000411257 104 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 AC108667.1-201ENST00000428618 249 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 AC093850.1-201ENST00000454121 251 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 RPS29P29-201ENST00000456396 171 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 RNU2-35P-201ENST00000516446 142 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 RNA5SP170-201ENST00000517150 101 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 MIR4498-201ENST00000577599 66 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
USPL1Q5W0Q7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.58□□□□□ -2
USPL1Q5W0Q7 RNU6-1298P-201ENST00000362456 101 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 RNU6-766P-201ENST00000362478 107 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 RNU6-1014P-201ENST00000383940 103 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 SNORA17.3-201ENST00000391159 129 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 AC019129.1-201ENST00000403786 261 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 RNA5SP89-201ENST00000410300 108 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 SNORD123-201ENST00000459473 70 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.57□□□□□ -2
USPL1Q5W0Q7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 AL035470.1-201ENST00000622571 220 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 MIR203B-201ENST00000636080 86 ntBASIC2.57□□□□□ -2
USPL1Q5W0Q7 SNORA63.5-201ENST00000363548 123 ntBASIC2.56□□□□□ -2
USPL1Q5W0Q7 Y_RNA.537-201ENST00000384626 109 ntBASIC2.56□□□□□ -2
USPL1Q5W0Q7 RNU7-73P-201ENST00000458743 63 ntBASIC2.56□□□□□ -2
USPL1Q5W0Q7 RNU7-67P-201ENST00000459003 62 ntBASIC2.56□□□□□ -2
USPL1Q5W0Q7 AC055731.1-201ENST00000474387 401 ntBASIC2.56□□□□□ -2
USPL1Q5W0Q7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
USPL1Q5W0Q7 MIR450A1-201ENST00000362262 91 ntBASIC2.55□□□□□ -2
USPL1Q5W0Q7 RNU4-16P-201ENST00000364737 141 ntBASIC2.55□□□□□ -2
USPL1Q5W0Q7 MIR526A1-201ENST00000384897 85 ntBASIC2.55□□□□□ -2
USPL1Q5W0Q7 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
USPL1Q5W0Q7 RNA5SP182-201ENST00000516064 82 ntBASIC2.55□□□□□ -2
USPL1Q5W0Q7 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
USPL1Q5W0Q7 SNORA31.17-201ENST00000516953 127 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms