Protein–RNA interactions for Protein: Q5JS37

NHLRC3, NHL repeat-containing protein 3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3Q5JS37 Y_RNA.797-201ENST00000515977 94 ntBASIC0.86□□□□□ -2.27
NHLRC3Q5JS37 RNU11-2P-201ENST00000516898 142 ntBASIC0.86□□□□□ -2.27
NHLRC3Q5JS37 MIR548AO-201ENST00000579992 96 ntBASIC0.86□□□□□ -2.27
NHLRC3Q5JS37 Z83818.1-201ENST00000603584 150 ntBASIC0.86□□□□□ -2.27
NHLRC3Q5JS37 AP000942.4-201ENST00000604811 241 ntBASIC0.86□□□□□ -2.27
NHLRC3Q5JS37 SNORD114-21-201ENST00000606412 72 ntBASIC0.86□□□□□ -2.27
NHLRC3Q5JS37 SEPT14P17-201ENST00000617978 177 ntBASIC0.86□□□□□ -2.27
NHLRC3Q5JS37 AC141273.2-201ENST00000618989 130 ntBASIC0.86□□□□□ -2.27
NHLRC3Q5JS37 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
NHLRC3Q5JS37 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 Y_RNA.182-201ENST00000363880 111 ntBASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 Y_RNA.274-201ENST00000364714 101 ntBASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 Y_RNA.410-201ENST00000383992 113 ntBASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 Y_RNA.435-201ENST00000384095 112 ntBASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 SNORD77.3-201ENST00000391113 65 ntBASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 RNU7-40P-201ENST00000516397 64 ntBASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 AC078938.1-201ENST00000620993 318 ntBASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 AC008163.1-202ENST00000636004 2889 ntBASIC0.85□□□□□ -2.27
NHLRC3Q5JS37 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 MIR378A-201ENST00000362177 66 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 Y_RNA.75-201ENST00000362927 97 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 RNU6-978P-201ENST00000364371 103 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 RNU6-275P-201ENST00000364910 107 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 Y_RNA.412-201ENST00000384001 104 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 SNORA27-201ENST00000384323 126 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 AC087343.1-201ENST00000477341 475 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 MIR6516-201ENST00000630554 81 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 U6.106-201ENST00000636360 105 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 MIR376A2-201ENST00000636782 80 ntBASIC0.84□□□□□ -2.27
NHLRC3Q5JS37 RNU6-1020P-201ENST00000363684 107 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.330-201ENST00000365230 109 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 RNU6-1189P-201ENST00000383958 107 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.440-201ENST00000384120 114 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.476-201ENST00000384347 108 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.542-201ENST00000384641 111 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 RNU6-482P-201ENST00000391068 107 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 RNU7-67P-201ENST00000459003 62 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 snoU13.16-201ENST00000459350 104 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 RPS29P24-201ENST00000486345 171 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 RNU6-958P-201ENST00000516995 106 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 RNU6-388P-201ENST00000517012 105 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 RNU6-389P-201ENST00000517048 105 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 MIR378D2-201ENST00000580636 98 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 MIR3129-201ENST00000581095 76 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 AL365205.2-201ENST00000594586 68 ntBASIC0.83□□□□□ -2.28
NHLRC3Q5JS37 RNU6-654P-201ENST00000364373 107 ntBASIC0.82□□□□□ -2.28
NHLRC3Q5JS37 RNU6-643P-201ENST00000384018 107 ntBASIC0.82□□□□□ -2.28
NHLRC3Q5JS37 RNU7-73P-201ENST00000458743 63 ntBASIC0.82□□□□□ -2.28
NHLRC3Q5JS37 SNORD116-25-201ENST00000516517 92 ntBASIC0.82□□□□□ -2.28
NHLRC3Q5JS37 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.82□□□□□ -2.28
NHLRC3Q5JS37 MRPS18CP4-201ENST00000535821 231 ntBASIC0.82□□□□□ -2.28
NHLRC3Q5JS37 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.82□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.297-201ENST00000364950 91 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 RNU6-1292P-201ENST00000383856 107 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.515-201ENST00000384535 112 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.552-201ENST00000384665 112 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 RNU6-913P-201ENST00000390913 95 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 RNU6-613P-201ENST00000410412 108 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 SNORD124-201ENST00000459577 104 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 RNU6-998P-201ENST00000515894 101 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 AC022559.1-201ENST00000520905 205 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 AC131055.1-201ENST00000584626 316 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 MIR8055-201ENST00000610739 97 ntBASIC0.81□□□□□ -2.28
NHLRC3Q5JS37 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.233-201ENST00000364407 101 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 RNU6-200P-201ENST00000364743 107 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 RNU6-396P-201ENST00000365369 105 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 AC090844.1-201ENST00000422019 156 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 AL035398.1-201ENST00000430869 322 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.644-201ENST00000459006 113 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 RNU7-96P-201ENST00000459535 64 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 RNU6-1219P-201ENST00000516143 112 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 Y_RNA.674-201ENST00000516362 113 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 MIR2115-201ENST00000516657 100 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 RNU7-53P-201ENST00000516705 60 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 AC036111.3-201ENST00000526389 112 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 AC023827.1-201ENST00000569247 97 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 MIR5197-201ENST00000583721 112 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
NHLRC3Q5JS37 RNU6-125P-201ENST00000384505 107 ntBASIC0.79□□□□□ -2.28
NHLRC3Q5JS37 MT-TN-201ENST00000387400 73 ntBASIC0.79□□□□□ -2.28
NHLRC3Q5JS37 RNA5SP95-201ENST00000410319 137 ntBASIC0.79□□□□□ -2.28
NHLRC3Q5JS37 AL138752.1-201ENST00000452964 351 ntBASIC0.79□□□□□ -2.28
NHLRC3Q5JS37 RNU6-138P-201ENST00000515952 107 ntBASIC0.79□□□□□ -2.28
NHLRC3Q5JS37 MIR4431-201ENST00000579990 94 ntBASIC0.79□□□□□ -2.28
NHLRC3Q5JS37 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.79□□□□□ -2.28
NHLRC3Q5JS37 MIR4781-201ENST00000585250 76 ntBASIC0.79□□□□□ -2.28
NHLRC3Q5JS37 AC106800.4-201ENST00000614905 153 ntBASIC0.79□□□□□ -2.28
NHLRC3Q5JS37 AL391516.1-201ENST00000554380 2449 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms