Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU7-80P-201ENST00000459562 61 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 RPS29P24-201ENST00000486345 171 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 Y_RNA.690-201ENST00000516603 95 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 MIR3618-201ENST00000580330 88 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.03□□□□□ -2.08
SSRP1Q08945 AC132825.6-201ENST00000638861 357 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 Y_RNA.351-201ENST00000365436 96 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 Y_RNA.454-201ENST00000384224 113 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 MIR520C-201ENST00000385005 87 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 SNX2P2-201ENST00000424553 323 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 RNU2-13P-201ENST00000515909 113 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 RNU6-406P-201ENST00000516470 107 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 MIR4764-201ENST00000580680 88 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.02□□□□□ -2.09
SSRP1Q08945 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.02□□□□□ -2.09
SSRP1Q08945 AL357312.1-201ENST00000603879 298 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 MIR6845-201ENST00000613182 61 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.02□□□□□ -2.09
SSRP1Q08945 RNU6-1065P-201ENST00000384513 106 ntBASIC2.01□□□□□ -2.09
SSRP1Q08945 Y_RNA.537-201ENST00000384626 109 ntBASIC2.01□□□□□ -2.09
SSRP1Q08945 RNU6-998P-201ENST00000515894 101 ntBASIC2.01□□□□□ -2.09
SSRP1Q08945 SNORD111.1-201ENST00000516421 86 ntBASIC2.01□□□□□ -2.09
SSRP1Q08945 Y_RNA.692-201ENST00000516627 105 ntBASIC2.01□□□□□ -2.09
SSRP1Q08945 AC024614.2-201ENST00000577584 372 ntBASIC2.01□□□□□ -2.09
SSRP1Q08945 SNORD48-201ENST00000364953 64 ntBASIC2□□□□□ -2.09
SSRP1Q08945 SNORA26.9-201ENST00000391322 122 ntBASIC2□□□□□ -2.09
SSRP1Q08945 AC019176.1-201ENST00000518519 225 ntBASIC2□□□□□ -2.09
SSRP1Q08945 Y_RNA.757-201ENST00000578934 114 ntBASIC2□□□□□ -2.09
SSRP1Q08945 GHRLOS.1-201ENST00000610995 70 ntBASIC2□□□□□ -2.09
SSRP1Q08945 AC011603.4-201ENST00000611325 277 ntBASIC2□□□□□ -2.09
SSRP1Q08945 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2□□□□□ -2.09
SSRP1Q08945 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SSRP1Q08945 RNU1-133P-201ENST00000364867 167 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 RNU6-81P-201ENST00000365608 104 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 MIR539-201ENST00000365690 78 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 SNORA24-201ENST00000384096 131 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 AC027119.1-201ENST00000440877 241 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 RPS29P29-201ENST00000456396 171 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 MIR3937-201ENST00000580135 106 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 MIR4791-201ENST00000607666 84 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 MIR8081-201ENST00000611533 95 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 AC243994.1-201ENST00000618627 109 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 AC091932.4-201ENST00000623386 200 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 AC008133.2-201ENST00000624540 351 ntBASIC1.99□□□□□ -2.09
SSRP1Q08945 MIR342-201ENST00000362212 99 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 RNU6-309P-201ENST00000364573 106 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 SNORA51.10-201ENST00000384418 136 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 MIR570-201ENST00000384917 97 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 AL035398.1-201ENST00000430869 322 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 RNU7-67P-201ENST00000459003 62 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 Y_RNA.676-201ENST00000516393 96 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 RNU7-53P-201ENST00000516705 60 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 AL022345.2-201ENST00000606307 135 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.98□□□□□ -2.09
SSRP1Q08945 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.98□□□□□ -2.09
SSRP1Q08945 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSRP1Q08945 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SSRP1Q08945 Y_RNA.140-201ENST00000363474 103 ntBASIC1.97□□□□□ -2.09
SSRP1Q08945 MIR934-201ENST00000401241 83 ntBASIC1.97□□□□□ -2.09
SSRP1Q08945 MIR4422-201ENST00000581938 83 ntBASIC1.97□□□□□ -2.09
SSRP1Q08945 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.97□□□□□ -2.09
SSRP1Q08945 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SSRP1Q08945 AL596211.1-201ENST00000569873 2277 ntBASIC1.97□□□□□ -2.09
SSRP1Q08945 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SSRP1Q08945 MIR302B-201ENST00000362188 73 ntBASIC1.96□□□□□ -2.1
SSRP1Q08945 RNU1-78P-201ENST00000391248 165 ntBASIC1.96□□□□□ -2.1
SSRP1Q08945 RNU2-11P-201ENST00000459191 187 ntBASIC1.96□□□□□ -2.1
SSRP1Q08945 Y_RNA.651-201ENST00000459380 103 ntBASIC1.96□□□□□ -2.1
SSRP1Q08945 RPL30P7-201ENST00000479312 323 ntBASIC1.96□□□□□ -2.1
SSRP1Q08945 RNU6-113P-201ENST00000516653 101 ntBASIC1.96□□□□□ -2.1
SSRP1Q08945 RNU6-958P-201ENST00000516995 106 ntBASIC1.96□□□□□ -2.1
SSRP1Q08945 MIR3121-201ENST00000579680 77 ntBASIC1.96□□□□□ -2.1
SSRP1Q08945 RNU1-17P-201ENST00000363022 152 ntBASIC1.95□□□□□ -2.1
SSRP1Q08945 RNU6-508P-201ENST00000363231 103 ntBASIC1.95□□□□□ -2.1
SSRP1Q08945 AC245517.4-201ENST00000448601 281 ntBASIC1.95□□□□□ -2.1
SSRP1Q08945 RNU6-1211P-201ENST00000459179 105 ntBASIC1.95□□□□□ -2.1
SSRP1Q08945 RNA5SP445-201ENST00000515889 115 ntBASIC1.95□□□□□ -2.1
SSRP1Q08945 RNU5E-3P-201ENST00000515913 68 ntBASIC1.95□□□□□ -2.1
SSRP1Q08945 RNU6-971P-201ENST00000516920 106 ntBASIC1.95□□□□□ -2.1
SSRP1Q08945 RPL39P39-201ENST00000455840 151 ntBASIC1.94□□□□□ -2.1
SSRP1Q08945 RNU7-73P-201ENST00000458743 63 ntBASIC1.94□□□□□ -2.1
SSRP1Q08945 RNU7-41P-201ENST00000515917 61 ntBASIC1.94□□□□□ -2.1
SSRP1Q08945 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.94□□□□□ -2.1
SSRP1Q08945 RNA5SP48-201ENST00000363969 126 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 Y_RNA.338-201ENST00000365320 114 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 RNY1P6-201ENST00000384193 109 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 RNU6-959P-201ENST00000384671 107 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 AP000942.3-201ENST00000603702 160 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 AC012493.3-201ENST00000604494 112 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 MIR502-201ENST00000606349 86 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 AL096861.1-201ENST00000610899 123 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 MIR4251-201ENST00000635819 61 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 AP000648.3-201ENST00000623539 4507 ntBASIC1.93□□□□□ -2.1
SSRP1Q08945 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SSRP1Q08945 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SSRP1Q08945 Y_RNA.114-201ENST00000363265 113 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms