Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 AC010332.2-201ENST00000613083 1904 ntBASIC2.2□□□□□ -2.06
HDLBPQ00341 RNA5SP190-201ENST00000365222 118 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 Y_RNA.351-201ENST00000365436 96 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 SNORA40-201ENST00000388090 126 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 AC108667.1-201ENST00000428618 249 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 RPS29P11-201ENST00000496507 171 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 SNORD111.1-201ENST00000516421 86 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 SNORA25.15-201ENST00000516487 89 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 MIR4764-201ENST00000580680 88 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 TUG1_4.1-201ENST00000619464 181 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 AC091895.1-201ENST00000624494 256 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 MTND5P32-201ENST00000560711 1802 ntBASIC2.19□□□□□ -2.06
HDLBPQ00341 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HDLBPQ00341 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HDLBPQ00341 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HDLBPQ00341 RNU6-187P-201ENST00000384139 106 ntBASIC2.18□□□□□ -2.06
HDLBPQ00341 AL603914.1-201ENST00000401964 204 ntBASIC2.18□□□□□ -2.06
HDLBPQ00341 RPL31P63-201ENST00000422565 375 ntBASIC2.18□□□□□ -2.06
HDLBPQ00341 AC027119.1-201ENST00000440877 241 ntBASIC2.18□□□□□ -2.06
HDLBPQ00341 MIR4498-201ENST00000577599 66 ntBASIC2.18□□□□□ -2.06
HDLBPQ00341 Y_RNA.757-201ENST00000578934 114 ntBASIC2.18□□□□□ -2.06
HDLBPQ00341 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.17□□□□□ -2.06
HDLBPQ00341 MIR302B-201ENST00000362188 73 ntBASIC2.17□□□□□ -2.06
HDLBPQ00341 AL035398.1-201ENST00000430869 322 ntBASIC2.17□□□□□ -2.06
HDLBPQ00341 RPS29P29-201ENST00000456396 171 ntBASIC2.17□□□□□ -2.06
HDLBPQ00341 RNU7-67P-201ENST00000459003 62 ntBASIC2.17□□□□□ -2.06
HDLBPQ00341 RNA5SP445-201ENST00000515889 115 ntBASIC2.17□□□□□ -2.06
HDLBPQ00341 Y_RNA.692-201ENST00000516627 105 ntBASIC2.17□□□□□ -2.06
HDLBPQ00341 MIR3935-201ENST00000583472 104 ntBASIC2.17□□□□□ -2.06
HDLBPQ00341 U7.2-201ENST00000607576 63 ntBASIC2.17□□□□□ -2.06
HDLBPQ00341 AC008133.2-201ENST00000624540 351 ntBASIC2.17□□□□□ -2.06
HDLBPQ00341 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HDLBPQ00341 RNA5SP48-201ENST00000363969 126 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 RNU1-133P-201ENST00000364867 167 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 RNU6-915P-201ENST00000364943 103 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 SNORA51.10-201ENST00000384418 136 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 SNORD41-201ENST00000386967 70 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 SNORA67.5-201ENST00000391036 107 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 RNU6-460P-201ENST00000391158 108 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 RNU6-998P-201ENST00000515894 101 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 SCARNA15-202ENST00000516881 127 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 AC019176.1-201ENST00000518519 225 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 AC012493.3-201ENST00000604494 112 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 AC243994.1-201ENST00000618627 109 ntBASIC2.16□□□□□ -2.06
HDLBPQ00341 Y_RNA.338-201ENST00000365320 114 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HDLBPQ00341 SNORD28B-201ENST00000390993 75 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 RNU4-61P-201ENST00000411243 107 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 SNORD13-201ENST00000459299 104 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 RNU2-13P-201ENST00000515909 113 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 Y_RNA.690-201ENST00000516603 95 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 RNU6-113P-201ENST00000516653 101 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 RNU6-789P-201ENST00000517105 102 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 MIR4791-201ENST00000607666 84 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 AC011603.4-201ENST00000611325 277 ntBASIC2.15□□□□□ -2.07
HDLBPQ00341 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
HDLBPQ00341 U8.1-201ENST00000362843 134 ntBASIC2.14□□□□□ -2.07
HDLBPQ00341 MIR539-201ENST00000365690 78 ntBASIC2.14□□□□□ -2.07
HDLBPQ00341 SNORA24-201ENST00000384096 131 ntBASIC2.14□□□□□ -2.07
HDLBPQ00341 Y_RNA.676-201ENST00000516393 96 ntBASIC2.14□□□□□ -2.07
HDLBPQ00341 MIR376A2-201ENST00000636782 80 ntBASIC2.14□□□□□ -2.07
HDLBPQ00341 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HDLBPQ00341 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HDLBPQ00341 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.13□□□□□ -2.07
HDLBPQ00341 RNA5SP261-201ENST00000410536 106 ntBASIC2.13□□□□□ -2.07
HDLBPQ00341 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.13□□□□□ -2.07
HDLBPQ00341 RNU7-73P-201ENST00000458743 63 ntBASIC2.12□□□□□ -2.07
HDLBPQ00341 snoU13.16-201ENST00000459350 104 ntBASIC2.12□□□□□ -2.07
HDLBPQ00341 AC091932.4-201ENST00000623386 200 ntBASIC2.12□□□□□ -2.07
HDLBPQ00341 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.12□□□□□ -2.07
HDLBPQ00341 MIR342-201ENST00000362212 99 ntBASIC2.11□□□□□ -2.07
HDLBPQ00341 SNORA16.1-201ENST00000364597 132 ntBASIC2.11□□□□□ -2.07
HDLBPQ00341 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.11□□□□□ -2.07
HDLBPQ00341 RNA5SP236-201ENST00000516169 116 ntBASIC2.11□□□□□ -2.07
HDLBPQ00341 MIR502-201ENST00000606349 86 ntBASIC2.11□□□□□ -2.07
HDLBPQ00341 snoU13.31-201ENST00000607291 104 ntBASIC2.11□□□□□ -2.07
HDLBPQ00341 AL121890.5-201ENST00000620848 304 ntBASIC2.11□□□□□ -2.07
HDLBPQ00341 AL596211.1-201ENST00000569873 2277 ntBASIC2.11□□□□□ -2.07
HDLBPQ00341 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
HDLBPQ00341 SNORA20-201ENST00000384662 132 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 RNU6-257P-201ENST00000410238 98 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 MTND4LP9-201ENST00000427694 174 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 RNU2-11P-201ENST00000459191 187 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 RN7SL274P-201ENST00000492268 272 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 RNU6-958P-201ENST00000516995 106 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 RNU6-902P-201ENST00000517212 91 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.1□□□□□ -2.07
HDLBPQ00341 MIR3664-201ENST00000579074 99 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HDLBPQ00341 MIR4251-201ENST00000635819 61 ntBASIC2.1□□□□□ -2.07
HDLBPQ00341 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
HDLBPQ00341 MIR378A-201ENST00000362177 66 ntBASIC2.09□□□□□ -2.07
HDLBPQ00341 Y_RNA.586-201ENST00000391146 98 ntBASIC2.09□□□□□ -2.07
HDLBPQ00341 AC108729.3-201ENST00000513484 108 ntBASIC2.09□□□□□ -2.07
HDLBPQ00341 RNU6-947P-201ENST00000516264 106 ntBASIC2.09□□□□□ -2.07
HDLBPQ00341 Y_RNA.686-201ENST00000516548 134 ntBASIC2.09□□□□□ -2.07
HDLBPQ00341 AL022345.2-201ENST00000606307 135 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms