Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SEPT14P19-203ENST00000633205 211 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 U6.109-201ENST00000636749 87 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-74P-201ENST00000384235 107 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 SNORD73A-201ENST00000386062 65 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 MTND3P9-201ENST00000429526 346 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU7-167P-201ENST00000459160 62 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-531P-201ENST00000516694 104 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 MTND4LP18-201ENST00000526864 291 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 AC007012.1-201ENST00000567192 175 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-484P-201ENST00000384016 107 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 MIR302B-201ENST00000362188 73 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU4-58P-201ENST00000363192 141 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 SNORD115-32-201ENST00000364079 82 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-757P-201ENST00000410334 100 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 MIR4460-201ENST00000577862 86 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-905P-201ENST00000384434 107 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-550P-201ENST00000391057 101 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.64□□□□□ -2.51
HSPG2P98160 MTND3P21-201ENST00000433774 331 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.64□□□□□ -2.51
HSPG2P98160 TRAJ51-201ENST00000504127 63 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-998P-201ENST00000515894 101 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-436P-201ENST00000516171 114 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 AC022616.6-201ENST00000520479 119 ntBASIC-0.64□□□□□ -2.51
HSPG2P98160 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 RNU4-70P-201ENST00000384579 139 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 MIR519E-201ENST00000385075 84 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 MIR548O-201ENST00000408583 114 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 SNORA36B-201ENST00000410438 131 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 MTND2P3-201ENST00000452458 470 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 AC245505.1-201ENST00000556398 224 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 HULC.1-201ENST00000612720 240 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 RNU6-489P-201ENST00000618289 107 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.65□□□□□ -2.51
HSPG2P98160 RNU7-80P-201ENST00000459562 61 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.65□□□□□ -2.51
HSPG2P98160 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 SCOCP1-201ENST00000554676 349 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 RNU6-281P-201ENST00000384212 103 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 RNU4-61P-201ENST00000411243 107 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.65□□□□□ -2.51
HSPG2P98160 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.65□□□□□ -2.51
HSPG2P98160 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.65□□□□□ -2.51
HSPG2P98160 AL080274.1-201ENST00000605565 220 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 AC131235.4-201ENST00000609288 620 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 U2.17-201ENST00000611454 95 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 AL133173.2-201ENST00000614270 90 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.65□□□□□ -2.51
HSPG2P98160 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 SNORA51.5-201ENST00000384126 131 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 RNU6-913P-201ENST00000390913 95 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 BX295541.1-201ENST00000417774 250 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 MTATP6P13-201ENST00000438531 667 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 MIR548AG2-201ENST00000581228 64 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 PART1_1.1-201ENST00000611761 217 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 AC073534.2-201ENST00000620377 381 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 RNY1P16-201ENST00000363063 111 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 MIR548H3-201ENST00000408771 118 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 YWHAEP3-201ENST00000582767 121 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 AC087683.2-201ENST00000611384 326 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 AC079248.2-201ENST00000623779 326 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 AL138960.2-201ENST00000625145 535 ntBASIC-0.66□□□□□ -2.51
HSPG2P98160 SNORD114-10-201ENST00000363409 72 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 RNU4-20P-201ENST00000365601 151 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 RNU6-767P-201ENST00000384132 107 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 RNU6-533P-201ENST00000384144 107 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 RNU6-601P-201ENST00000384540 107 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 RNY3P9-201ENST00000384727 106 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 CHEK2P4-201ENST00000450340 246 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 MTND2P30-201ENST00000456663 382 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 MTCO2P30-201ENST00000503662 364 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AC055872.1-201ENST00000570978 278 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 YWHAEP2-201ENST00000580066 112 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AC098479.1-201ENST00000609225 154 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AC093783.1-201ENST00000612976 329 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms