Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 RNU4-70P-201ENST00000384579 139 ntBASIC0.87□□□□□ -2.27
SRPXP78539 MIR19B1-201ENST00000384829 87 ntBASIC0.87□□□□□ -2.27
SRPXP78539 RNU6-913P-201ENST00000390913 95 ntBASIC0.87□□□□□ -2.27
SRPXP78539 SNORD12-201ENST00000391002 90 ntBASIC0.87□□□□□ -2.27
SRPXP78539 SNORD77.3-201ENST00000391113 65 ntBASIC0.87□□□□□ -2.27
SRPXP78539 RNU4-43P-201ENST00000410628 137 ntBASIC0.87□□□□□ -2.27
SRPXP78539 Y_RNA.618-201ENST00000410949 107 ntBASIC0.87□□□□□ -2.27
SRPXP78539 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.87□□□□□ -2.27
SRPXP78539 AC087499.4-201ENST00000448505 178 ntBASIC0.87□□□□□ -2.27
SRPXP78539 RNU7-67P-201ENST00000459003 62 ntBASIC0.87□□□□□ -2.27
SRPXP78539 RNU6-958P-201ENST00000516995 106 ntBASIC0.87□□□□□ -2.27
SRPXP78539 DNAJC19P9-201ENST00000555084 351 ntBASIC0.87□□□□□ -2.27
SRPXP78539 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.87□□□□□ -2.27
SRPXP78539 U6.106-201ENST00000636360 105 ntBASIC0.87□□□□□ -2.27
SRPXP78539 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SRPXP78539 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SRPXP78539 Y_RNA.121-201ENST00000363309 113 ntBASIC0.86□□□□□ -2.27
SRPXP78539 RNU1-124P-201ENST00000363861 145 ntBASIC0.86□□□□□ -2.27
SRPXP78539 SNORA24-201ENST00000384096 131 ntBASIC0.86□□□□□ -2.27
SRPXP78539 RNU6-1067P-201ENST00000384752 107 ntBASIC0.86□□□□□ -2.27
SRPXP78539 SNORA40.5-201ENST00000391061 128 ntBASIC0.86□□□□□ -2.27
SRPXP78539 SNORA79-201ENST00000408376 140 ntBASIC0.86□□□□□ -2.27
SRPXP78539 RNU4-62P-201ENST00000410125 130 ntBASIC0.86□□□□□ -2.27
SRPXP78539 AC108667.1-201ENST00000428618 249 ntBASIC0.86□□□□□ -2.27
SRPXP78539 RNU7-90P-201ENST00000459216 62 ntBASIC0.86□□□□□ -2.27
SRPXP78539 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.86□□□□□ -2.27
SRPXP78539 AC131055.1-201ENST00000584626 316 ntBASIC0.86□□□□□ -2.27
SRPXP78539 MIR4781-201ENST00000585250 76 ntBASIC0.86□□□□□ -2.27
SRPXP78539 HSPE1P19-201ENST00000603327 295 ntBASIC0.86□□□□□ -2.27
SRPXP78539 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.86□□□□□ -2.27
SRPXP78539 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SRPXP78539 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SRPXP78539 MIR342-201ENST00000362212 99 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RNA5SP99-201ENST00000364020 114 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RNU6-978P-201ENST00000364371 103 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RNU6-275P-201ENST00000364910 107 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RNU6-1189P-201ENST00000383958 107 ntBASIC0.85□□□□□ -2.27
SRPXP78539 Y_RNA.440-201ENST00000384120 114 ntBASIC0.85□□□□□ -2.27
SRPXP78539 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.85□□□□□ -2.27
SRPXP78539 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RNU6-1190P-201ENST00000410811 104 ntBASIC0.85□□□□□ -2.27
SRPXP78539 HMGN1P33-201ENST00000432945 451 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RNU7-95P-201ENST00000459222 64 ntBASIC0.85□□□□□ -2.27
SRPXP78539 AC107297.1-201ENST00000459991 176 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RPS29P24-201ENST00000486345 171 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
SRPXP78539 RNU6-94P-201ENST00000607728 107 ntBASIC0.85□□□□□ -2.27
SRPXP78539 MIR378A-201ENST00000362177 66 ntBASIC0.84□□□□□ -2.27
SRPXP78539 RNU6-1020P-201ENST00000363684 107 ntBASIC0.84□□□□□ -2.27
SRPXP78539 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
SRPXP78539 RNU6-1336P-201ENST00000383886 109 ntBASIC0.84□□□□□ -2.27
SRPXP78539 RNU6-643P-201ENST00000384018 107 ntBASIC0.84□□□□□ -2.27
SRPXP78539 RNU6-125P-201ENST00000384505 107 ntBASIC0.84□□□□□ -2.27
SRPXP78539 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SRPXP78539 AP1B1P2-201ENST00000416196 106 ntBASIC0.84□□□□□ -2.27
SRPXP78539 RNU6-1219P-201ENST00000516143 112 ntBASIC0.84□□□□□ -2.27
SRPXP78539 MIR4769-201ENST00000584126 77 ntBASIC0.84□□□□□ -2.27
SRPXP78539 SNORA7.1-201ENST00000363750 139 ntBASIC0.83□□□□□ -2.28
SRPXP78539 Y_RNA.297-201ENST00000364950 91 ntBASIC0.83□□□□□ -2.28
SRPXP78539 MT-TG-201ENST00000387429 68 ntBASIC0.83□□□□□ -2.28
SRPXP78539 AC006461.1-201ENST00000412637 326 ntBASIC0.83□□□□□ -2.28
SRPXP78539 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.83□□□□□ -2.28
SRPXP78539 snoU13.16-201ENST00000459350 104 ntBASIC0.83□□□□□ -2.28
SRPXP78539 RNU6-237P-201ENST00000515985 71 ntBASIC0.83□□□□□ -2.28
SRPXP78539 RNU11-2P-201ENST00000516898 142 ntBASIC0.83□□□□□ -2.28
SRPXP78539 AC036111.3-201ENST00000526389 112 ntBASIC0.83□□□□□ -2.28
SRPXP78539 MIR378D2-201ENST00000580636 98 ntBASIC0.83□□□□□ -2.28
SRPXP78539 Y_RNA.75-201ENST00000362927 97 ntBASIC0.82□□□□□ -2.28
SRPXP78539 Y_RNA.410-201ENST00000383992 113 ntBASIC0.82□□□□□ -2.28
SRPXP78539 SNORA70.7-201ENST00000384159 133 ntBASIC0.82□□□□□ -2.28
SRPXP78539 Y_RNA.476-201ENST00000384347 108 ntBASIC0.82□□□□□ -2.28
SRPXP78539 SNORA2B-201ENST00000384583 137 ntBASIC0.82□□□□□ -2.28
SRPXP78539 RNU6-205P-201ENST00000390858 107 ntBASIC0.82□□□□□ -2.28
SRPXP78539 BTF3P4-201ENST00000418852 495 ntBASIC0.82□□□□□ -2.28
SRPXP78539 SEPT7P4-201ENST00000437076 306 ntBASIC0.82□□□□□ -2.28
SRPXP78539 RNU7-73P-201ENST00000458743 63 ntBASIC0.82□□□□□ -2.28
SRPXP78539 RNU2-11P-201ENST00000459191 187 ntBASIC0.82□□□□□ -2.28
SRPXP78539 RNU7-45P-201ENST00000459460 63 ntBASIC0.82□□□□□ -2.28
SRPXP78539 RNU6-998P-201ENST00000515894 101 ntBASIC0.82□□□□□ -2.28
SRPXP78539 SNORD116-25-201ENST00000516517 92 ntBASIC0.82□□□□□ -2.28
SRPXP78539 MIR2115-201ENST00000516657 100 ntBASIC0.82□□□□□ -2.28
SRPXP78539 MIR5197-201ENST00000583721 112 ntBASIC0.82□□□□□ -2.28
SRPXP78539 AL365205.2-201ENST00000594586 68 ntBASIC0.82□□□□□ -2.28
SRPXP78539 Z83818.1-201ENST00000603584 150 ntBASIC0.82□□□□□ -2.28
SRPXP78539 AC141273.2-201ENST00000618989 130 ntBASIC0.82□□□□□ -2.28
SRPXP78539 AL353770.2-201ENST00000620024 78 ntBASIC0.82□□□□□ -2.28
SRPXP78539 RNU6-396P-201ENST00000365369 105 ntBASIC0.81□□□□□ -2.28
SRPXP78539 Y_RNA.435-201ENST00000384095 112 ntBASIC0.81□□□□□ -2.28
SRPXP78539 Y_RNA.542-201ENST00000384641 111 ntBASIC0.81□□□□□ -2.28
SRPXP78539 MIR942-201ENST00000401111 86 ntBASIC0.81□□□□□ -2.28
SRPXP78539 RNU6-613P-201ENST00000410412 108 ntBASIC0.81□□□□□ -2.28
SRPXP78539 AL035398.1-201ENST00000430869 322 ntBASIC0.81□□□□□ -2.28
SRPXP78539 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.81□□□□□ -2.28
SRPXP78539 Y_RNA.644-201ENST00000459006 113 ntBASIC0.81□□□□□ -2.28
SRPXP78539 snoU13.21-201ENST00000459368 105 ntBASIC0.81□□□□□ -2.28
SRPXP78539 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
SRPXP78539 AC005840.1-201ENST00000498412 377 ntBASIC0.81□□□□□ -2.28
SRPXP78539 RNU6-138P-201ENST00000515952 107 ntBASIC0.81□□□□□ -2.28
SRPXP78539 RNA5SP458-201ENST00000516188 119 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms