Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 Y_RNA.92-201ENST00000363043 102 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.235-201ENST00000364412 102 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.306-201ENST00000365015 102 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.312-201ENST00000365089 102 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.322-201ENST00000365151 102 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.370-201ENST00000365589 108 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.486-201ENST00000384398 107 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 RNA5SP193-201ENST00000410353 107 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.650-201ENST00000459002 102 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.83□□□□□ -2.28
RIPPLY3P57055 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.83□□□□□ -2.28
RIPPLY3P57055 SNORD116-28-201ENST00000516123 91 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 RNU6-693P-201ENST00000516134 107 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.777-201ENST00000516982 102 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 RNU6-365P-201ENST00000517113 106 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 RNU6-1270P-201ENST00000517128 108 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.83□□□□□ -2.28
RIPPLY3P57055 AC100767.1-201ENST00000528178 123 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.83□□□□□ -2.28
RIPPLY3P57055 MIR4662B-201ENST00000579498 81 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.771-201ENST00000598668 102 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 AL021707.8-201ENST00000609428 183 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 AC006441.5-201ENST00000612680 209 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 U4.1-201ENST00000620349 87 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.789-201ENST00000622480 102 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 MIR4251-201ENST00000635819 61 ntBASIC0.83□□□□□ -2.28
RIPPLY3P57055 Y_RNA.241-201ENST00000364470 117 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 Y_RNA.262-201ENST00000364641 102 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 Y_RNA.292-201ENST00000364904 97 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 Y_RNA.308-201ENST00000365043 101 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 SNORA1.2-201ENST00000365189 134 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 SNORA2A-201ENST00000383885 135 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 SNORA51.10-201ENST00000384418 136 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 Y_RNA.547-201ENST00000384654 119 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
RIPPLY3P57055 AL606845.1-201ENST00000404881 255 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 RNU6-1054P-201ENST00000411293 104 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 SNRPGP14-201ENST00000435400 219 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 AC107297.1-201ENST00000459991 176 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 SCARNA8-201ENST00000515924 131 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 SNORD77.4-201ENST00000516158 81 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 RNU6-1299P-201ENST00000516316 100 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 RNU6-453P-201ENST00000516819 85 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 MIR4643-201ENST00000577473 78 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 AL442067.1-201ENST00000613261 223 ntBASIC0.82□□□□□ -2.28
RIPPLY3P57055 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.82□□□□□ -2.28
RIPPLY3P57055 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RIPPLY3P57055 MIR409-201ENST00000362237 79 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 Y_RNA.76-201ENST00000362931 109 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 RNA5SP48-201ENST00000363969 126 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 RNU6-702P-201ENST00000364982 107 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 RNU6-1138P-201ENST00000365359 106 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 RNU4-17P-201ENST00000365598 141 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 SNORA80D-201ENST00000384488 135 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 RNA5SP63-201ENST00000391225 112 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 MIR1468-201ENST00000410600 86 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 AC063976.4-201ENST00000421971 163 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 SNORD2.1-201ENST00000458762 69 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 RNY3P16-201ENST00000516338 101 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 AC109810.1-201ENST00000534066 224 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 AC062037.2-201ENST00000610137 73 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 AL391903.3-201ENST00000612158 163 ntBASIC0.81□□□□□ -2.28
RIPPLY3P57055 RNA5SP347-201ENST00000362445 119 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 RNA5SP264-201ENST00000363115 107 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 snoU2_19.4-201ENST00000364329 80 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 RNU6-923P-201ENST00000364753 107 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 Y_RNA.304-201ENST00000365011 112 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 Y_RNA.350-201ENST00000365409 98 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 Y_RNA.432-201ENST00000384087 111 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 RNU6-493P-201ENST00000391321 108 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 SNORA79-201ENST00000408376 140 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 RNA5SP266-201ENST00000410273 108 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 RNU7-67P-201ENST00000459003 62 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 RNU6-830P-201ENST00000516353 107 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.8□□□□□ -2.28
RIPPLY3P57055 MIR5688-201ENST00000580619 83 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 MIR3128-201ENST00000581957 66 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 MIR4503-201ENST00000582187 83 ntBASIC0.8□□□□□ -2.28
RIPPLY3P57055 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RIPPLY3P57055 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 SNORD115-28-201ENST00000363931 81 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 SNORA20.1-201ENST00000364790 130 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 Y_RNA.363-201ENST00000365529 113 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 RNU6-1228P-201ENST00000391014 107 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 SNORA75.2-201ENST00000391138 150 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 SNORA75.3-201ENST00000391231 150 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 SNORA26-201ENST00000391286 122 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.79□□□□□ -2.28
RIPPLY3P57055 SNRPGP12-201ENST00000449481 213 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 snoU13.25-201ENST00000458945 104 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 SNORD79.1-201ENST00000516069 84 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 RNU6-504P-201ENST00000516568 104 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 MIR3149-201ENST00000584629 83 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 AC027335.2-201ENST00000624030 375 ntBASIC0.79□□□□□ -2.28
RIPPLY3P57055 MIR342-201ENST00000362212 99 ntBASIC0.78□□□□□ -2.28
RIPPLY3P57055 Y_RNA.91-201ENST00000363042 107 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms