Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
WNT3AP56704 MTND5P18-201ENST00000445624 1801 ntBASIC1.91□□□□□ -2.1
WNT3AP56704 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
WNT3AP56704 MIR302B-201ENST00000362188 73 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 RNU6-349P-201ENST00000362402 107 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 MIR548A1-201ENST00000385041 97 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 MIR513A1-201ENST00000385138 129 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 HMGN2P38-201ENST00000423806 265 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 JTBP1-201ENST00000441314 247 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 RNU6-917P-201ENST00000516294 104 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 RNU6-919P-201ENST00000516731 104 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 AC022254.1-201ENST00000567857 235 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
WNT3AP56704 AC021443.1-201ENST00000604478 211 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
WNT3AP56704 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
WNT3AP56704 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
WNT3AP56704 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.89□□□□□ -2.11
WNT3AP56704 RNU6-834P-201ENST00000362367 110 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 RNU6-661P-201ENST00000362409 107 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 SNORA1.2-201ENST00000365189 134 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 Y_RNA.346-201ENST00000365385 112 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 Y_RNA.454-201ENST00000384224 113 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 MIRLET7F2-201ENST00000385277 83 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
WNT3AP56704 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
WNT3AP56704 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 Y_RNA.649-201ENST00000459077 103 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 RNU2-11P-201ENST00000459191 187 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 RNU7-45P-201ENST00000459460 63 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 AC107297.1-201ENST00000459991 176 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 RNU6-998P-201ENST00000515894 101 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 RNY4P20-201ENST00000516678 93 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 MIR548AR-201ENST00000582191 57 ntBASIC1.89□□□□□ -2.11
WNT3AP56704 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.89□□□□□ -2.11
WNT3AP56704 AL442644.1-201ENST00000454390 3105 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 SNORA63.4-201ENST00000362763 126 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 MIR194-1-201ENST00000384892 85 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 RNU7-67P-201ENST00000459003 62 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 RNU7-96P-201ENST00000459535 64 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 RNU6-958P-201ENST00000516995 106 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
WNT3AP56704 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.88□□□□□ -2.11
WNT3AP56704 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.88□□□□□ -2.11
WNT3AP56704 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
WNT3AP56704 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
WNT3AP56704 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
WNT3AP56704 AL035398.1-201ENST00000430869 322 ntBASIC1.87□□□□□ -2.11
WNT3AP56704 AC003989.2-201ENST00000440224 169 ntBASIC1.87□□□□□ -2.11
WNT3AP56704 RNU7-164P-201ENST00000459221 62 ntBASIC1.87□□□□□ -2.11
WNT3AP56704 UBL5P3-201ENST00000475112 231 ntBASIC1.87□□□□□ -2.11
WNT3AP56704 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
WNT3AP56704 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
WNT3AP56704 Y_RNA.35-201ENST00000362601 101 ntBASIC1.86□□□□□ -2.11
WNT3AP56704 SNORD116-21-201ENST00000384507 92 ntBASIC1.86□□□□□ -2.11
WNT3AP56704 RPL23AP42-201ENST00000471152 471 ntBASIC1.86□□□□□ -2.11
WNT3AP56704 SNORA31.4-201ENST00000516049 129 ntBASIC1.86□□□□□ -2.11
WNT3AP56704 MIR8074-201ENST00000615081 81 ntBASIC1.86□□□□□ -2.11
WNT3AP56704 AL161935.2-201ENST00000414627 60 ntBASIC1.85□□□□□ -2.11
WNT3AP56704 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
WNT3AP56704 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
WNT3AP56704 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
WNT3AP56704 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
WNT3AP56704 Y_RNA.298-201ENST00000364960 107 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 SNORA70.7-201ENST00000384159 133 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 RNA5SP136-201ENST00000410906 107 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 RNU7-123P-201ENST00000515911 60 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 RNU6-322P-201ENST00000516010 103 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 RNA5SP182-201ENST00000516064 82 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 RNU6-922P-201ENST00000516753 99 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 SNORA44.1-201ENST00000517031 108 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 SNORA74.3-201ENST00000517108 154 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 AC022523.2-201ENST00000561045 150 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.84□□□□□ -2.11
WNT3AP56704 MIR4305-201ENST00000583252 102 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 MIR4791-201ENST00000607666 84 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 AC243994.1-201ENST00000618627 109 ntBASIC1.84□□□□□ -2.11
WNT3AP56704 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
WNT3AP56704 RNY4P18-201ENST00000391107 89 ntBASIC1.83□□□□□ -2.12
WNT3AP56704 AL451046.2-201ENST00000403074 277 ntBASIC1.83□□□□□ -2.12
WNT3AP56704 RNU6-1190P-201ENST00000410811 104 ntBASIC1.83□□□□□ -2.12
WNT3AP56704 RPS29P29-201ENST00000456396 171 ntBASIC1.83□□□□□ -2.12
WNT3AP56704 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
WNT3AP56704 RNU2-35P-201ENST00000516446 142 ntBASIC1.83□□□□□ -2.12
WNT3AP56704 Y_RNA.709-201ENST00000516952 92 ntBASIC1.83□□□□□ -2.12
WNT3AP56704 AC021613.1-201ENST00000623880 111 ntBASIC1.83□□□□□ -2.12
WNT3AP56704 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.83□□□□□ -2.12
WNT3AP56704 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
WNT3AP56704 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
WNT3AP56704 SNORA22-201ENST00000383907 134 ntBASIC1.82□□□□□ -2.12
WNT3AP56704 MIR520C-201ENST00000385005 87 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms