Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SNORD115-10-201ENST00000365073 81 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-43-201ENST00000365503 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-36-201ENST00000365629 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORA27-201ENST00000384323 126 ntBASIC1.83□□□□□ -2.12
PER3P56645 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PER3P56645 RNU6-1234P-201ENST00000516877 103 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORA74.3-201ENST00000517108 154 ntBASIC1.83□□□□□ -2.12
PER3P56645 AC090049.2-201ENST00000550377 109 ntBASIC1.83□□□□□ -2.12
PER3P56645 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-40-201ENST00000606510 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 AC011603.4-201ENST00000611325 277 ntBASIC1.83□□□□□ -2.12
PER3P56645 Y_RNA.783-201ENST00000613546 102 ntBASIC1.83□□□□□ -2.12
PER3P56645 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
PER3P56645 Y_RNA.370-201ENST00000365589 108 ntBASIC1.82□□□□□ -2.12
PER3P56645 SNORD18B-201ENST00000365659 72 ntBASIC1.82□□□□□ -2.12
PER3P56645 SNORD41-201ENST00000386967 70 ntBASIC1.82□□□□□ -2.12
PER3P56645 AL627390.1-201ENST00000396055 340 ntBASIC1.82□□□□□ -2.12
PER3P56645 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.82□□□□□ -2.12
PER3P56645 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
PER3P56645 AC108667.1-201ENST00000428618 249 ntBASIC1.82□□□□□ -2.12
PER3P56645 Y_RNA.692-201ENST00000516627 105 ntBASIC1.82□□□□□ -2.12
PER3P56645 AC090821.2-201ENST00000523552 176 ntBASIC1.82□□□□□ -2.12
PER3P56645 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
PER3P56645 AL022345.2-201ENST00000606307 135 ntBASIC1.82□□□□□ -2.12
PER3P56645 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PER3P56645 Y_RNA.71-201ENST00000362892 104 ntBASIC1.81□□□□□ -2.12
PER3P56645 Y_RNA.114-201ENST00000363265 113 ntBASIC1.81□□□□□ -2.12
PER3P56645 RNY1P10-201ENST00000363268 113 ntBASIC1.81□□□□□ -2.12
PER3P56645 Y_RNA.351-201ENST00000365436 96 ntBASIC1.81□□□□□ -2.12
PER3P56645 MIR539-201ENST00000365690 78 ntBASIC1.81□□□□□ -2.12
PER3P56645 MIR570-201ENST00000384917 97 ntBASIC1.81□□□□□ -2.12
PER3P56645 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
PER3P56645 AC108081.1-201ENST00000604358 221 ntBASIC1.81□□□□□ -2.12
PER3P56645 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.81□□□□□ -2.12
PER3P56645 SNORA1.2-201ENST00000365189 134 ntBASIC1.8□□□□□ -2.12
PER3P56645 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
PER3P56645 MTATP6P21-201ENST00000440681 189 ntBASIC1.8□□□□□ -2.12
PER3P56645 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
PER3P56645 MIR7111-201ENST00000619751 72 ntBASIC1.8□□□□□ -2.12
PER3P56645 AC091932.4-201ENST00000623386 200 ntBASIC1.8□□□□□ -2.12
PER3P56645 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.8□□□□□ -2.12
PER3P56645 SNORD1A-201ENST00000364968 72 ntBASIC1.79□□□□□ -2.12
PER3P56645 SNORA24-201ENST00000384096 131 ntBASIC1.79□□□□□ -2.12
PER3P56645 RNU6-22P-201ENST00000384355 107 ntBASIC1.79□□□□□ -2.12
PER3P56645 RNU6-1117P-201ENST00000384525 104 ntBASIC1.79□□□□□ -2.12
PER3P56645 RPS29P24-201ENST00000486345 171 ntBASIC1.79□□□□□ -2.12
PER3P56645 RNU6-998P-201ENST00000515894 101 ntBASIC1.79□□□□□ -2.12
PER3P56645 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
PER3P56645 AL365222.1-201ENST00000614661 98 ntBASIC1.79□□□□□ -2.12
PER3P56645 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.79□□□□□ -2.12
PER3P56645 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PER3P56645 RNU6-349P-201ENST00000362402 107 ntBASIC1.78□□□□□ -2.12
PER3P56645 RNU6-235P-201ENST00000362644 107 ntBASIC1.78□□□□□ -2.12
PER3P56645 RNU6-80P-201ENST00000384195 107 ntBASIC1.78□□□□□ -2.12
PER3P56645 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
PER3P56645 AL158147.1-201ENST00000443970 75 ntBASIC1.78□□□□□ -2.12
PER3P56645 snoU13.9-201ENST00000458927 103 ntBASIC1.78□□□□□ -2.12
PER3P56645 RNU5E-3P-201ENST00000515913 68 ntBASIC1.78□□□□□ -2.12
PER3P56645 RNU6-922P-201ENST00000516753 99 ntBASIC1.78□□□□□ -2.12
PER3P56645 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
PER3P56645 IGKV1-22-201ENST00000524313 326 ntBASIC1.78□□□□□ -2.12
PER3P56645 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.78□□□□□ -2.12
PER3P56645 Y_RNA.757-201ENST00000578934 114 ntBASIC1.78□□□□□ -2.12
PER3P56645 MIR4764-201ENST00000580680 88 ntBASIC1.78□□□□□ -2.12
PER3P56645 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.78□□□□□ -2.12
PER3P56645 AL513534.2-201ENST00000603836 250 ntBASIC1.78□□□□□ -2.12
PER3P56645 MIR8063-201ENST00000621930 81 ntBASIC1.78□□□□□ -2.12
PER3P56645 MIR342-201ENST00000362212 99 ntBASIC1.77□□□□□ -2.13
PER3P56645 Y_RNA.118-201ENST00000363300 101 ntBASIC1.77□□□□□ -2.13
PER3P56645 Y_RNA.525-201ENST00000384570 113 ntBASIC1.77□□□□□ -2.13
PER3P56645 AL451046.2-201ENST00000403074 277 ntBASIC1.77□□□□□ -2.13
PER3P56645 MIR548I2-201ENST00000408348 149 ntBASIC1.77□□□□□ -2.13
PER3P56645 HSPE1P24-201ENST00000450782 238 ntBASIC1.77□□□□□ -2.13
PER3P56645 RNU7-107P-201ENST00000459121 61 ntBASIC1.77□□□□□ -2.13
PER3P56645 RNU7-96P-201ENST00000459535 64 ntBASIC1.77□□□□□ -2.13
PER3P56645 RNU7-43P-201ENST00000516554 64 ntBASIC1.77□□□□□ -2.13
PER3P56645 MIR4791-201ENST00000607666 84 ntBASIC1.77□□□□□ -2.13
PER3P56645 Y_RNA.261-201ENST00000364631 102 ntBASIC1.76□□□□□ -2.13
PER3P56645 SNORD116-14-201ENST00000383894 92 ntBASIC1.76□□□□□ -2.13
PER3P56645 SNORD116-17-201ENST00000383929 92 ntBASIC1.76□□□□□ -2.13
PER3P56645 SNORD116-15-201ENST00000384445 92 ntBASIC1.76□□□□□ -2.13
PER3P56645 SNORD116-19-201ENST00000384729 92 ntBASIC1.76□□□□□ -2.13
PER3P56645 SNX2P2-201ENST00000424553 323 ntBASIC1.76□□□□□ -2.13
PER3P56645 RNU2-11P-201ENST00000459191 187 ntBASIC1.76□□□□□ -2.13
PER3P56645 RNU7-80P-201ENST00000459562 61 ntBASIC1.76□□□□□ -2.13
PER3P56645 RNU6-322P-201ENST00000516010 103 ntBASIC1.76□□□□□ -2.13
PER3P56645 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
PER3P56645 HSPE1P19-201ENST00000603327 295 ntBASIC1.76□□□□□ -2.13
PER3P56645 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PER3P56645 AL596211.1-201ENST00000569873 2277 ntBASIC1.75□□□□□ -2.13
PER3P56645 Y_RNA.127-201ENST00000363386 109 ntBASIC1.75□□□□□ -2.13
PER3P56645 RNU1-133P-201ENST00000364867 167 ntBASIC1.75□□□□□ -2.13
PER3P56645 Y_RNA.508-201ENST00000384502 114 ntBASIC1.75□□□□□ -2.13
PER3P56645 Y_RNA.537-201ENST00000384626 109 ntBASIC1.75□□□□□ -2.13
PER3P56645 MIR499A-201ENST00000384903 122 ntBASIC1.75□□□□□ -2.13
PER3P56645 MIR520C-201ENST00000385005 87 ntBASIC1.75□□□□□ -2.13
PER3P56645 Y_RNA.617-201ENST00000410920 90 ntBASIC1.75□□□□□ -2.13
PER3P56645 AL035398.1-201ENST00000430869 322 ntBASIC1.75□□□□□ -2.13
PER3P56645 RPS29P29-201ENST00000456396 171 ntBASIC1.75□□□□□ -2.13
PER3P56645 AC107297.1-201ENST00000459991 176 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms