Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 RNU6-1299P-201ENST00000516316 100 ntBASIC1.07□□□□□ -2.24
CLCN4P51793 RNU7-25P-201ENST00000516544 62 ntBASIC1.07□□□□□ -2.24
CLCN4P51793 RNU7-43P-201ENST00000516554 64 ntBASIC1.07□□□□□ -2.24
CLCN4P51793 Y_RNA.91-201ENST00000363042 107 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 RNU6-275P-201ENST00000364910 107 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 Y_RNA.297-201ENST00000364950 91 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 RNU6-910P-201ENST00000390844 107 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 MIR548O-201ENST00000408583 114 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 RNU6-1054P-201ENST00000411293 104 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.06□□□□□ -2.24
CLCN4P51793 RNU2-13P-201ENST00000515909 113 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 Y_RNA.666-201ENST00000516187 112 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 RNU6-365P-201ENST00000517113 106 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 RNU2-4P-201ENST00000606190 192 ntBASIC1.06□□□□□ -2.24
CLCN4P51793 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CLCN4P51793 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLCN4P51793 SNORD114-26-201ENST00000363543 72 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 RNU6-1020P-201ENST00000363684 107 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 Y_RNA.412-201ENST00000384001 104 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 SNORD61-201ENST00000384252 73 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 RNU6-342P-201ENST00000384521 104 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CLCN4P51793 AC245047.7-201ENST00000440265 293 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 snoU13.25-201ENST00000458945 104 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 Y_RNA.644-201ENST00000459006 113 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 UBL5P1-201ENST00000507979 193 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 Y_RNA.674-201ENST00000516362 113 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 SNORD111.1-201ENST00000516421 86 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 RNU6-504P-201ENST00000516568 104 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 MRPS18CP4-201ENST00000535821 231 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 AL096861.1-201ENST00000610899 123 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.05□□□□□ -2.24
CLCN4P51793 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
CLCN4P51793 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 RNU4-70P-201ENST00000384579 139 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 U8.17-201ENST00000391292 132 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 Y_RNA.622-201ENST00000411091 108 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 RNU6-938P-201ENST00000411285 103 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 SNORA18.7-201ENST00000516910 131 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 RNU6-794P-201ENST00000517261 64 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 AP003716.2-201ENST00000528260 108 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 MIR4764-201ENST00000580680 88 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 AC072026.1-201ENST00000605023 201 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.04□□□□□ -2.24
CLCN4P51793 AC015726.2-201ENST00000620112 122 ntBASIC1.04□□□□□ -2.24
CLCN4P51793 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.04□□□□□ -2.24
CLCN4P51793 Y_RNA.23-201ENST00000362496 106 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 SNORD115-28-201ENST00000363931 81 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 RNU6-978P-201ENST00000364371 103 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 Y_RNA.233-201ENST00000364407 101 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 SNORA24-201ENST00000384096 131 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 SNORD28B-201ENST00000390993 75 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 RNU2-70P-201ENST00000410718 179 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 AC087499.4-201ENST00000448505 178 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 AL138752.1-201ENST00000452964 351 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 RNU7-120P-201ENST00000459334 63 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 RNA5SP404-201ENST00000517118 132 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 MIR5000-201ENST00000577717 103 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 MIR548AR-201ENST00000582191 57 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 MIR3192-201ENST00000584920 77 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 AL365205.2-201ENST00000594586 68 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 U6.106-201ENST00000636360 105 ntBASIC1.03□□□□□ -2.24
CLCN4P51793 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
CLCN4P51793 Y_RNA.182-201ENST00000363880 111 ntBASIC1.02□□□□□ -2.25
CLCN4P51793 RNU6-643P-201ENST00000384018 107 ntBASIC1.02□□□□□ -2.25
CLCN4P51793 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.02□□□□□ -2.25
CLCN4P51793 Y_RNA.797-201ENST00000515977 94 ntBASIC1.02□□□□□ -2.25
CLCN4P51793 RNA5SP436-201ENST00000516020 115 ntBASIC1.02□□□□□ -2.25
CLCN4P51793 RNU6-693P-201ENST00000516134 107 ntBASIC1.02□□□□□ -2.25
CLCN4P51793 RNU6-1219P-201ENST00000516143 112 ntBASIC1.02□□□□□ -2.25
CLCN4P51793 MIR3671-201ENST00000580455 88 ntBASIC1.02□□□□□ -2.25
CLCN4P51793 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-34-201ENST00000362441 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 Y_RNA.29-201ENST00000362570 113 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-12-201ENST00000362583 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 Y_RNA.37-201ENST00000362606 108 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-29-201ENST00000362834 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-9-201ENST00000362912 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-21-201ENST00000362963 81 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-14-201ENST00000363090 81 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-13-201ENST00000363358 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-41-201ENST00000363608 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-11-201ENST00000363616 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-5-201ENST00000363633 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-39-201ENST00000363694 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-4-201ENST00000363810 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-16-201ENST00000363887 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-6-201ENST00000363942 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-42-201ENST00000364273 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 Y_RNA.240-201ENST00000364469 95 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 RNU6-312P-201ENST00000364629 107 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-15-201ENST00000364809 81 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms