Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SNORD77.3-201ENST00000391113 65 ntBASIC1.41□□□□□ -2.18
CLCN3P51790 SNORA75.5-201ENST00000391291 81 ntBASIC1.41□□□□□ -2.18
CLCN3P51790 MIR548M-201ENST00000408260 86 ntBASIC1.41□□□□□ -2.18
CLCN3P51790 AC093850.1-201ENST00000454121 251 ntBASIC1.41□□□□□ -2.18
CLCN3P51790 RNU6-917P-201ENST00000516294 104 ntBASIC1.41□□□□□ -2.18
CLCN3P51790 RNU6-970P-201ENST00000516312 107 ntBASIC1.41□□□□□ -2.18
CLCN3P51790 MIR3664-201ENST00000579074 99 ntBASIC1.41□□□□□ -2.18
CLCN3P51790 MIR6078-201ENST00000611069 100 ntBASIC1.41□□□□□ -2.18
CLCN3P51790 RNU4-11P-201ENST00000365287 132 ntBASIC1.4□□□□□ -2.19
CLCN3P51790 AL451046.2-201ENST00000403074 277 ntBASIC1.4□□□□□ -2.19
CLCN3P51790 AF228730.3-201ENST00000436691 102 ntBASIC1.4□□□□□ -2.19
CLCN3P51790 RNU6-693P-201ENST00000516134 107 ntBASIC1.4□□□□□ -2.19
CLCN3P51790 RNU6-1270P-201ENST00000517128 108 ntBASIC1.4□□□□□ -2.19
CLCN3P51790 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
CLCN3P51790 AL357312.1-201ENST00000603879 298 ntBASIC1.4□□□□□ -2.19
CLCN3P51790 GHRLOS.1-201ENST00000610995 70 ntBASIC1.4□□□□□ -2.19
CLCN3P51790 AC106754.2-201ENST00000623006 233 ntBASIC1.4□□□□□ -2.19
CLCN3P51790 RNU6-1336P-201ENST00000383886 109 ntBASIC1.39□□□□□ -2.19
CLCN3P51790 Y_RNA.568-201ENST00000384742 113 ntBASIC1.39□□□□□ -2.19
CLCN3P51790 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
CLCN3P51790 RNU6-588P-201ENST00000410281 105 ntBASIC1.39□□□□□ -2.19
CLCN3P51790 SCARNA15-202ENST00000516881 127 ntBASIC1.39□□□□□ -2.19
CLCN3P51790 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.39□□□□□ -2.19
CLCN3P51790 AC112693.2-201ENST00000556538 232 ntBASIC1.39□□□□□ -2.19
CLCN3P51790 MIR548X2-201ENST00000579776 100 ntBASIC1.39□□□□□ -2.19
CLCN3P51790 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
CLCN3P51790 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.39□□□□□ -2.19
CLCN3P51790 MIR6844-201ENST00000637122 62 ntBASIC1.39□□□□□ -2.19
CLCN3P51790 Y_RNA.37-201ENST00000362606 108 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 SNORD115-28-201ENST00000363931 81 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 SNORA25.7-201ENST00000364375 127 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 SNORD38C-201ENST00000384381 69 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 Y_RNA.497-201ENST00000384447 98 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 Y_RNA.521-201ENST00000384560 114 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CLCN3P51790 RNA5SP127-201ENST00000411051 133 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 RNU2-13P-201ENST00000515909 113 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 RNA5SP236-201ENST00000516169 116 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 RNU2-60P-201ENST00000517290 128 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 AC134878.1-201ENST00000619901 243 ntBASIC1.38□□□□□ -2.19
CLCN3P51790 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CLCN3P51790 RNU6-704P-201ENST00000364162 103 ntBASIC1.37□□□□□ -2.19
CLCN3P51790 Y_RNA.410-201ENST00000383992 113 ntBASIC1.37□□□□□ -2.19
CLCN3P51790 MIR613-201ENST00000385248 95 ntBASIC1.37□□□□□ -2.19
CLCN3P51790 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
CLCN3P51790 MIR1287-201ENST00000408492 90 ntBASIC1.37□□□□□ -2.19
CLCN3P51790 AC087499.4-201ENST00000448505 178 ntBASIC1.37□□□□□ -2.19
CLCN3P51790 MIR3129-201ENST00000581095 76 ntBASIC1.37□□□□□ -2.19
CLCN3P51790 MIR5197-201ENST00000583721 112 ntBASIC1.37□□□□□ -2.19
CLCN3P51790 SNORA25.9-201ENST00000365087 128 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 SNORD113-1-201ENST00000365321 69 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 Y_RNA.488-201ENST00000384403 102 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 MIR136-201ENST00000385207 82 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 RNU6-426P-201ENST00000516464 97 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 RNU6-406P-201ENST00000516470 107 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 SNORD36C-201ENST00000516733 66 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 AC131055.1-201ENST00000584626 316 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 AP001340.1-201ENST00000624405 217 ntBASIC1.36□□□□□ -2.19
CLCN3P51790 Y_RNA.52-201ENST00000362760 96 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 MIR499A-201ENST00000384903 122 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 MIR516B2-201ENST00000385190 85 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 MIR802-201ENST00000390235 94 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 MIR1276-201ENST00000408707 83 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.35□□□□□ -2.19
CLCN3P51790 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 RNU6-922P-201ENST00000516753 99 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 RNA5SP102-201ENST00000516865 106 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 FAM106DP-201ENST00000586416 501 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CLCN3P51790 AC015726.2-201ENST00000620112 122 ntBASIC1.35□□□□□ -2.19
CLCN3P51790 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.35□□□□□ -2.19
CLCN3P51790 Y_RNA.280-201ENST00000364765 112 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 SNORA24-201ENST00000384096 131 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 Y_RNA.440-201ENST00000384120 114 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 Y_RNA.494-201ENST00000384432 111 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 U8.17-201ENST00000391292 132 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.34□□□□□ -2.19
CLCN3P51790 SNORD123-201ENST00000459473 70 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 RN7SKP88-201ENST00000516847 250 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 SNORA74.3-201ENST00000517108 154 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 MIR3910-1-201ENST00000580936 111 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 7SK.8-201ENST00000612110 250 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 7SK.11-201ENST00000615477 250 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.34□□□□□ -2.19
CLCN3P51790 7SK.13-201ENST00000622040 250 ntBASIC1.34□□□□□ -2.19
CLCN3P51790 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CLCN3P51790 SNORD115-34-201ENST00000362441 82 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 SNORD115-12-201ENST00000362583 82 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 SNORD115-29-201ENST00000362834 82 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 SNORD115-9-201ENST00000362912 82 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 SNORD115-21-201ENST00000362963 81 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 SNORD115-14-201ENST00000363090 81 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 Y_RNA.120-201ENST00000363304 110 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 SNORD115-13-201ENST00000363358 82 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 SNORD115-41-201ENST00000363608 82 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 SNORD115-11-201ENST00000363616 82 ntBASIC1.33□□□□□ -2.2
CLCN3P51790 SNORD115-5-201ENST00000363633 82 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms