Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 AC079140.2-201ENST00000506193 142 ntBASIC1.51□□□□□ -2.17
VPS41P49754 RNU7-43P-201ENST00000516554 64 ntBASIC1.51□□□□□ -2.17
VPS41P49754 RNU6-1149P-201ENST00000516810 97 ntBASIC1.51□□□□□ -2.17
VPS41P49754 AC019176.1-201ENST00000518519 225 ntBASIC1.51□□□□□ -2.17
VPS41P49754 MIR4764-201ENST00000580680 88 ntBASIC1.51□□□□□ -2.17
VPS41P49754 AC104984.5-201ENST00000586878 94 ntBASIC1.51□□□□□ -2.17
VPS41P49754 GHRLOS.1-201ENST00000610995 70 ntBASIC1.51□□□□□ -2.17
VPS41P49754 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.51□□□□□ -2.17
VPS41P49754 SNORD33-201ENST00000362761 85 ntBASIC1.5□□□□□ -2.17
VPS41P49754 U8.1-201ENST00000362843 134 ntBASIC1.5□□□□□ -2.17
VPS41P49754 Y_RNA.420-201ENST00000384043 110 ntBASIC1.5□□□□□ -2.17
VPS41P49754 SNX2P2-201ENST00000424553 323 ntBASIC1.5□□□□□ -2.17
VPS41P49754 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
VPS41P49754 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.5□□□□□ -2.17
VPS41P49754 SNORA31.4-201ENST00000516049 129 ntBASIC1.5□□□□□ -2.17
VPS41P49754 Y_RNA.686-201ENST00000516548 134 ntBASIC1.5□□□□□ -2.17
VPS41P49754 MIR4255-201ENST00000579351 72 ntBASIC1.5□□□□□ -2.17
VPS41P49754 MIR4298-201ENST00000584380 73 ntBASIC1.5□□□□□ -2.17
VPS41P49754 AP001340.1-201ENST00000624405 217 ntBASIC1.5□□□□□ -2.17
VPS41P49754 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS41P49754 Y_RNA.120-201ENST00000363304 110 ntBASIC1.49□□□□□ -2.17
VPS41P49754 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
VPS41P49754 RNU6-704P-201ENST00000364162 103 ntBASIC1.49□□□□□ -2.17
VPS41P49754 RNA5SP190-201ENST00000365222 118 ntBASIC1.49□□□□□ -2.17
VPS41P49754 Y_RNA.343-201ENST00000365354 112 ntBASIC1.49□□□□□ -2.17
VPS41P49754 Y_RNA.537-201ENST00000384626 109 ntBASIC1.49□□□□□ -2.17
VPS41P49754 SNORA20-201ENST00000384662 132 ntBASIC1.49□□□□□ -2.17
VPS41P49754 MIR570-201ENST00000384917 97 ntBASIC1.49□□□□□ -2.17
VPS41P49754 RNU6-257P-201ENST00000410238 98 ntBASIC1.49□□□□□ -2.17
VPS41P49754 AC245517.4-201ENST00000448601 281 ntBASIC1.49□□□□□ -2.17
VPS41P49754 SNORD53B-201ENST00000577887 78 ntBASIC1.49□□□□□ -2.17
VPS41P49754 MIR4791-201ENST00000607666 84 ntBASIC1.49□□□□□ -2.17
VPS41P49754 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
VPS41P49754 AC010332.2-201ENST00000613083 1904 ntBASIC1.48□□□□□ -2.17
VPS41P49754 MIR520C-201ENST00000385005 87 ntBASIC1.48□□□□□ -2.17
VPS41P49754 MIR517C-201ENST00000385103 95 ntBASIC1.48□□□□□ -2.17
VPS41P49754 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
VPS41P49754 AL591806.2-201ENST00000433122 173 ntBASIC1.48□□□□□ -2.17
VPS41P49754 snoU13.25-201ENST00000458945 104 ntBASIC1.48□□□□□ -2.17
VPS41P49754 SNORD13-201ENST00000459299 104 ntBASIC1.48□□□□□ -2.17
VPS41P49754 RPS29P24-201ENST00000486345 171 ntBASIC1.48□□□□□ -2.17
VPS41P49754 RNA5SP445-201ENST00000515889 115 ntBASIC1.48□□□□□ -2.17
VPS41P49754 RNU6-998P-201ENST00000515894 101 ntBASIC1.48□□□□□ -2.17
VPS41P49754 RNU7-41P-201ENST00000515917 61 ntBASIC1.48□□□□□ -2.17
VPS41P49754 SNORD111.1-201ENST00000516421 86 ntBASIC1.48□□□□□ -2.17
VPS41P49754 MIR3664-201ENST00000579074 99 ntBASIC1.48□□□□□ -2.17
VPS41P49754 MIR3192-201ENST00000584920 77 ntBASIC1.48□□□□□ -2.17
VPS41P49754 AL096861.1-201ENST00000610899 123 ntBASIC1.48□□□□□ -2.17
VPS41P49754 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
VPS41P49754 MIR7843-201ENST00000622274 79 ntBASIC1.48□□□□□ -2.17
VPS41P49754 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS41P49754 RNU6-508P-201ENST00000363231 103 ntBASIC1.47□□□□□ -2.17
VPS41P49754 RNU6-915P-201ENST00000364943 103 ntBASIC1.47□□□□□ -2.17
VPS41P49754 Y_RNA.586-201ENST00000391146 98 ntBASIC1.47□□□□□ -2.17
VPS41P49754 AL603914.1-201ENST00000401964 204 ntBASIC1.47□□□□□ -2.17
VPS41P49754 MTND4LP9-201ENST00000427694 174 ntBASIC1.47□□□□□ -2.17
VPS41P49754 RPS29P29-201ENST00000456396 171 ntBASIC1.47□□□□□ -2.17
VPS41P49754 Y_RNA.651-201ENST00000459380 103 ntBASIC1.47□□□□□ -2.17
VPS41P49754 RNU7-96P-201ENST00000459535 64 ntBASIC1.47□□□□□ -2.17
VPS41P49754 RNU6-165P-201ENST00000517170 99 ntBASIC1.47□□□□□ -2.17
VPS41P49754 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
VPS41P49754 MIR3937-201ENST00000580135 106 ntBASIC1.47□□□□□ -2.17
VPS41P49754 AL357312.1-201ENST00000603879 298 ntBASIC1.47□□□□□ -2.17
VPS41P49754 AC243994.1-201ENST00000618627 109 ntBASIC1.47□□□□□ -2.17
VPS41P49754 AC008133.2-201ENST00000624540 351 ntBASIC1.47□□□□□ -2.17
VPS41P49754 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS41P49754 Y_RNA.351-201ENST00000365436 96 ntBASIC1.46□□□□□ -2.18
VPS41P49754 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
VPS41P49754 AC107297.1-201ENST00000459991 176 ntBASIC1.46□□□□□ -2.18
VPS41P49754 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS41P49754 MIR3683-201ENST00000580847 82 ntBASIC1.46□□□□□ -2.18
VPS41P49754 AL645939.4-201ENST00000604495 135 ntBASIC1.46□□□□□ -2.18
VPS41P49754 AC091932.4-201ENST00000623386 200 ntBASIC1.46□□□□□ -2.18
VPS41P49754 RNU6-309P-201ENST00000364573 106 ntBASIC1.45□□□□□ -2.18
VPS41P49754 RNU6-1065P-201ENST00000384513 106 ntBASIC1.45□□□□□ -2.18
VPS41P49754 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS41P49754 RPL30P7-201ENST00000479312 323 ntBASIC1.45□□□□□ -2.18
VPS41P49754 RNU6-902P-201ENST00000517212 91 ntBASIC1.45□□□□□ -2.18
VPS41P49754 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
VPS41P49754 AP001328.1-201ENST00000528550 176 ntBASIC1.45□□□□□ -2.18
VPS41P49754 MIR3121-201ENST00000579680 77 ntBASIC1.45□□□□□ -2.18
VPS41P49754 MIR3910-1-201ENST00000580936 111 ntBASIC1.45□□□□□ -2.18
VPS41P49754 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS41P49754 Y_RNA.280-201ENST00000364765 112 ntBASIC1.44□□□□□ -2.18
VPS41P49754 SNORA40-201ENST00000388090 126 ntBASIC1.44□□□□□ -2.18
VPS41P49754 AL035398.1-201ENST00000430869 322 ntBASIC1.44□□□□□ -2.18
VPS41P49754 RNU7-73P-201ENST00000458743 63 ntBASIC1.44□□□□□ -2.18
VPS41P49754 RNU7-80P-201ENST00000459562 61 ntBASIC1.44□□□□□ -2.18
VPS41P49754 AC108210.2-201ENST00000503681 201 ntBASIC1.44□□□□□ -2.18
VPS41P49754 Y_RNA.690-201ENST00000516603 95 ntBASIC1.44□□□□□ -2.18
VPS41P49754 MIR6715A-201ENST00000615929 79 ntBASIC1.44□□□□□ -2.18
VPS41P49754 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS41P49754 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
VPS41P49754 RNU6-349P-201ENST00000362402 107 ntBASIC1.43□□□□□ -2.18
VPS41P49754 RNU6-60P-201ENST00000364792 103 ntBASIC1.43□□□□□ -2.18
VPS41P49754 SNORA70.7-201ENST00000384159 133 ntBASIC1.43□□□□□ -2.18
VPS41P49754 SNORA51.10-201ENST00000384418 136 ntBASIC1.43□□□□□ -2.18
VPS41P49754 RNU6-1067P-201ENST00000384752 107 ntBASIC1.43□□□□□ -2.18
VPS41P49754 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
VPS41P49754 RNU6-913P-201ENST00000390913 95 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms