Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL138752.1-201ENST00000452964 351 ntBASIC0.33□□□□□ -2.36
CX3CR1P49238 SNORA40.15-201ENST00000516884 107 ntBASIC0.33□□□□□ -2.36
CX3CR1P49238 Y_RNA.721-201ENST00000517207 102 ntBASIC0.33□□□□□ -2.36
CX3CR1P49238 RNU6-988P-201ENST00000519081 107 ntBASIC0.33□□□□□ -2.36
CX3CR1P49238 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CX3CR1P49238 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.32□□□□□ -2.36
CX3CR1P49238 Y_RNA.152-201ENST00000363578 100 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 snoU2_19.4-201ENST00000364329 80 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 RNU5E-4P-201ENST00000364931 120 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 RNU6-867P-201ENST00000364956 107 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CX3CR1P49238 SNORA27-201ENST00000384323 126 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 MIR499A-201ENST00000384903 122 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 SNORD12C-201ENST00000386307 89 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 AC087499.4-201ENST00000448505 178 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 RNU6-1338P-201ENST00000516328 91 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 SCARNA24.2-201ENST00000516968 130 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
CX3CR1P49238 Y_RNA.224-201ENST00000364308 111 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 Y_RNA.242-201ENST00000364473 110 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 SNORD24-201ENST00000383884 75 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 Y_RNA.460-201ENST00000384255 102 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 RNU6-1289P-201ENST00000384431 106 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 Y_RNA.512-201ENST00000384518 102 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 MIR588-201ENST00000384900 83 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 MIR626-201ENST00000385032 94 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 MIR563-201ENST00000385080 79 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 AC023449.1-201ENST00000454464 154 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 RNU7-45P-201ENST00000459460 63 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 RPS29P24-201ENST00000486345 171 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 SERF1AP1-201ENST00000514575 187 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 RNU6-453P-201ENST00000516819 85 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 AC100767.1-201ENST00000528178 123 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 Y_RNA.802-201ENST00000614892 130 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 AP001282.2-201ENST00000616149 309 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 AC243829.3-201ENST00000622177 108 ntBASIC0.31□□□□□ -2.36
CX3CR1P49238 RNU6-1309P-201ENST00000363305 108 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 Y_RNA.275-201ENST00000364726 110 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 RNU6-597P-201ENST00000365620 102 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 SNORA1-201ENST00000384107 130 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 RNU6-1228P-201ENST00000391014 107 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 SNORA53-201ENST00000391141 249 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 SNORA26.6-201ENST00000391256 115 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 RNU6-1165P-201ENST00000410119 107 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 RNU6-1203P-201ENST00000410703 110 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 RNA5SP247-201ENST00000411181 105 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 SNRPGP8-201ENST00000454064 226 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.3□□□□□ -2.36
CX3CR1P49238 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.3□□□□□ -2.36
CX3CR1P49238 snoU13.2-201ENST00000459201 104 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 AC107297.1-201ENST00000459991 176 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 RNU6-1223P-201ENST00000517124 104 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
CX3CR1P49238 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.29□□□□□ -2.36
CX3CR1P49238 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 MIR30D-201ENST00000362283 70 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 RNU6-740P-201ENST00000364734 105 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 Y_RNA.634-201ENST00000364811 113 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 Y_RNA.440-201ENST00000384120 114 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 RNU6-514P-201ENST00000384208 107 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 SNORD38B-201ENST00000384690 67 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 MTCYBP6-201ENST00000441810 138 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 AL731563.1-201ENST00000442202 214 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 RNU7-102P-201ENST00000458948 62 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 RNU2-11P-201ENST00000459191 187 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 RNU6-998P-201ENST00000515894 101 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 RNU6-561P-201ENST00000516222 102 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 RNU6-570P-201ENST00000517051 105 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 MIR4662B-201ENST00000579498 81 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 AC006006.1-201ENST00000603082 144 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 MIR6513-201ENST00000621188 64 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 SNORD38B-202ENST00000625943 69 ntBASIC0.29□□□□□ -2.36
CX3CR1P49238 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 Y_RNA.23-201ENST00000362496 106 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 RNA5SP517-201ENST00000364724 117 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 RNU1-133P-201ENST00000364867 167 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 SNORA8.3-201ENST00000384679 139 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 MIR125B2-201ENST00000385128 89 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 SNORD77.3-201ENST00000391113 65 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 MIR548I3-201ENST00000408378 149 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 Y_RNA.622-201ENST00000411091 108 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.28□□□□□ -2.36
CX3CR1P49238 RNU7-185P-201ENST00000459215 60 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 RNU6-365P-201ENST00000517113 106 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 AC090897.1-201ENST00000580909 226 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 AC243829.6-201ENST00000612652 106 ntBASIC0.28□□□□□ -2.36
CX3CR1P49238 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
CX3CR1P49238 Y_RNA.304-201ENST00000365011 112 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 MIR938-201ENST00000401216 83 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 SNORD100-201ENST00000408573 76 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 MTND4LP30-201ENST00000454092 297 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 MIR18B-201ENST00000454574 71 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 SNORD2.1-201ENST00000458762 69 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms