Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 Y_RNA.494-201ENST00000384432 111 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 SNORD116-15-201ENST00000384445 92 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 SNORD116-19-201ENST00000384729 92 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 RNU1-78P-201ENST00000391248 165 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 HSPE1P24-201ENST00000450782 238 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 RNU6-917P-201ENST00000516294 104 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 FAM106DP-201ENST00000586416 501 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 SNORD115-34-201ENST00000362441 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-12-201ENST00000362583 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 RNU6-235P-201ENST00000362644 107 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-29-201ENST00000362834 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-9-201ENST00000362912 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-21-201ENST00000362963 81 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-14-201ENST00000363090 81 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 Y_RNA.114-201ENST00000363265 113 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-13-201ENST00000363358 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 Y_RNA.127-201ENST00000363386 109 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-41-201ENST00000363608 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-11-201ENST00000363616 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-5-201ENST00000363633 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-39-201ENST00000363694 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-4-201ENST00000363810 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-16-201ENST00000363887 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-6-201ENST00000363942 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-42-201ENST00000364273 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-15-201ENST00000364809 81 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-1-201ENST00000364961 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-26-201ENST00000365067 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-10-201ENST00000365073 81 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-43-201ENST00000365503 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-36-201ENST00000365629 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 RNU6-1168P-201ENST00000390831 104 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORA40.5-201ENST00000391061 128 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORA17.3-201ENST00000391159 129 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 RNU2-51P-201ENST00000410708 197 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.76□□□□□ -2.13
NPTX2P47972 AC008267.6-201ENST00000441664 139 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 RPS26P48-201ENST00000491713 339 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 RNU5E-3P-201ENST00000515913 68 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 RNU6-479P-201ENST00000516348 105 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 AC090821.2-201ENST00000523552 176 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 MIR3124-201ENST00000582636 67 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 MIR4769-201ENST00000584126 77 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 SNORD115-40-201ENST00000606510 82 ntBASIC1.76□□□□□ -2.13
NPTX2P47972 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.76□□□□□ -2.13
NPTX2P47972 Y_RNA.261-201ENST00000364631 102 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 SNORA27-201ENST00000384323 126 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 SNORA22C-201ENST00000384614 134 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 MIR513A1-201ENST00000385138 129 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 SNORD28B-201ENST00000390993 75 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 AL158147.1-201ENST00000443970 75 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 RNU7-107P-201ENST00000459121 61 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 SNORD123-201ENST00000459473 70 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 RNU6-1333P-201ENST00000516162 93 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 RNU6-313P-201ENST00000516317 112 ntBASIC1.75□□□□□ -2.13
NPTX2P47972 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.75□□□□□ -2.13
NPTX2P47972 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.74□□□□□ -2.13
NPTX2P47972 Y_RNA.351-201ENST00000365436 96 ntBASIC1.74□□□□□ -2.13
NPTX2P47972 RNA5SP259-201ENST00000365541 109 ntBASIC1.74□□□□□ -2.13
NPTX2P47972 RNU6-1081P-201ENST00000384537 107 ntBASIC1.74□□□□□ -2.13
NPTX2P47972 RNU6-1154P-201ENST00000391001 104 ntBASIC1.74□□□□□ -2.13
NPTX2P47972 RNU6-482P-201ENST00000391068 107 ntBASIC1.74□□□□□ -2.13
NPTX2P47972 AC245517.4-201ENST00000448601 281 ntBASIC1.74□□□□□ -2.13
NPTX2P47972 MIR548AR-201ENST00000582191 57 ntBASIC1.74□□□□□ -2.13
NPTX2P47972 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NPTX2P47972 SNORD33-201ENST00000362761 85 ntBASIC1.73□□□□□ -2.13
NPTX2P47972 SNORA1.2-201ENST00000365189 134 ntBASIC1.73□□□□□ -2.13
NPTX2P47972 Y_RNA.525-201ENST00000384570 113 ntBASIC1.73□□□□□ -2.13
NPTX2P47972 RNU6-659P-201ENST00000516454 104 ntBASIC1.73□□□□□ -2.13
NPTX2P47972 AC015688.6-201ENST00000577737 104 ntBASIC1.73□□□□□ -2.13
NPTX2P47972 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.73□□□□□ -2.13
NPTX2P47972 AC108081.1-201ENST00000604358 221 ntBASIC1.73□□□□□ -2.13
NPTX2P47972 AC091932.4-201ENST00000623386 200 ntBASIC1.73□□□□□ -2.13
NPTX2P47972 Y_RNA.370-201ENST00000365589 108 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 MIR653-201ENST00000385279 96 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.72□□□□□ -2.13
NPTX2P47972 RNU7-80P-201ENST00000459562 61 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 RPS29P24-201ENST00000486345 171 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 RNU6-998P-201ENST00000515894 101 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 RNU7-70P-201ENST00000516941 66 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 SNORA74.3-201ENST00000517108 154 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 AC090049.2-201ENST00000550377 109 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 MIR548AI-201ENST00000579940 88 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 MIR8063-201ENST00000621930 81 ntBASIC1.72□□□□□ -2.13
NPTX2P47972 MIR342-201ENST00000362212 99 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 MIR302D-201ENST00000362275 68 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 RNU6-647P-201ENST00000364243 107 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 RNU1-133P-201ENST00000364867 167 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 SNORA67.5-201ENST00000391036 107 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 SNX2P2-201ENST00000424553 323 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 RNU7-96P-201ENST00000459535 64 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 RNA5SP445-201ENST00000515889 115 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 RNU2-13P-201ENST00000515909 113 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 RNU6-772P-201ENST00000516042 105 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 RNU6-113P-201ENST00000516653 101 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 MIR4303-201ENST00000581299 66 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
NPTX2P47972 AL596211.1-201ENST00000569873 2277 ntBASIC1.7□□□□□ -2.14
NPTX2P47972 RNU6-349P-201ENST00000362402 107 ntBASIC1.7□□□□□ -2.14
NPTX2P47972 RNA5SP205-201ENST00000364653 136 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms