Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU6-830P-201ENST00000516353 107 ntBASIC1.19□□□□□ -2.22
SHC1P29353 SNORA18.4-201ENST00000516440 124 ntBASIC1.19□□□□□ -2.22
SHC1P29353 SNORD36C-201ENST00000516733 66 ntBASIC1.19□□□□□ -2.22
SHC1P29353 RNU7-181P-201ENST00000517234 74 ntBASIC1.19□□□□□ -2.22
SHC1P29353 RNU2-60P-201ENST00000517290 128 ntBASIC1.19□□□□□ -2.22
SHC1P29353 MIR3910-1-201ENST00000580936 111 ntBASIC1.19□□□□□ -2.22
SHC1P29353 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.19□□□□□ -2.22
SHC1P29353 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SHC1P29353 RNU6-1292P-201ENST00000383856 107 ntBASIC1.18□□□□□ -2.22
SHC1P29353 Y_RNA.542-201ENST00000384641 111 ntBASIC1.18□□□□□ -2.22
SHC1P29353 MIR624-201ENST00000385217 97 ntBASIC1.18□□□□□ -2.22
SHC1P29353 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.18□□□□□ -2.22
SHC1P29353 MIR513C-201ENST00000401352 84 ntBASIC1.18□□□□□ -2.22
SHC1P29353 RNU6-257P-201ENST00000410238 98 ntBASIC1.18□□□□□ -2.22
SHC1P29353 RNU4-61P-201ENST00000411243 107 ntBASIC1.18□□□□□ -2.22
SHC1P29353 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.18□□□□□ -2.22
SHC1P29353 FAM106DP-201ENST00000586416 501 ntBASIC1.18□□□□□ -2.22
SHC1P29353 AC134878.1-201ENST00000619901 243 ntBASIC1.18□□□□□ -2.22
SHC1P29353 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
SHC1P29353 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.18□□□□□ -2.22
SHC1P29353 AC010332.2-201ENST00000613083 1904 ntBASIC1.17□□□□□ -2.22
SHC1P29353 Y_RNA.52-201ENST00000362760 96 ntBASIC1.17□□□□□ -2.22
SHC1P29353 Y_RNA.343-201ENST00000365354 112 ntBASIC1.17□□□□□ -2.22
SHC1P29353 Y_RNA.420-201ENST00000384043 110 ntBASIC1.17□□□□□ -2.22
SHC1P29353 MIR452-201ENST00000385020 85 ntBASIC1.17□□□□□ -2.22
SHC1P29353 MIR136-201ENST00000385207 82 ntBASIC1.17□□□□□ -2.22
SHC1P29353 SNORD28B-201ENST00000390993 75 ntBASIC1.17□□□□□ -2.22
SHC1P29353 U8.17-201ENST00000391292 132 ntBASIC1.17□□□□□ -2.22
SHC1P29353 MTND4LP9-201ENST00000427694 174 ntBASIC1.17□□□□□ -2.22
SHC1P29353 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.17□□□□□ -2.22
SHC1P29353 Y_RNA.686-201ENST00000516548 134 ntBASIC1.17□□□□□ -2.22
SHC1P29353 SCARNA15-202ENST00000516881 127 ntBASIC1.17□□□□□ -2.22
SHC1P29353 RNU6-902P-201ENST00000517212 91 ntBASIC1.17□□□□□ -2.22
SHC1P29353 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.17□□□□□ -2.22
SHC1P29353 AC015688.6-201ENST00000577737 104 ntBASIC1.17□□□□□ -2.22
SHC1P29353 MIR548AR-201ENST00000582191 57 ntBASIC1.17□□□□□ -2.22
SHC1P29353 AC131055.1-201ENST00000584626 316 ntBASIC1.17□□□□□ -2.22
SHC1P29353 AP001485.1-201ENST00000604799 199 ntBASIC1.17□□□□□ -2.22
SHC1P29353 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SHC1P29353 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
SHC1P29353 MIR302D-201ENST00000362275 68 ntBASIC1.16□□□□□ -2.22
SHC1P29353 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
SHC1P29353 RNA5SP259-201ENST00000365541 109 ntBASIC1.16□□□□□ -2.22
SHC1P29353 RNU6-1189P-201ENST00000383958 107 ntBASIC1.16□□□□□ -2.22
SHC1P29353 Y_RNA.410-201ENST00000383992 113 ntBASIC1.16□□□□□ -2.22
SHC1P29353 MIR513A1-201ENST00000385138 129 ntBASIC1.16□□□□□ -2.22
SHC1P29353 Y_RNA.584-201ENST00000391090 114 ntBASIC1.16□□□□□ -2.22
SHC1P29353 Y_RNA.586-201ENST00000391146 98 ntBASIC1.16□□□□□ -2.22
SHC1P29353 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
SHC1P29353 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.16□□□□□ -2.22
SHC1P29353 SNORA18.7-201ENST00000516910 131 ntBASIC1.16□□□□□ -2.22
SHC1P29353 AP003484.1-201ENST00000530974 250 ntBASIC1.16□□□□□ -2.22
SHC1P29353 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
SHC1P29353 AL359821.1-201ENST00000605519 182 ntBASIC1.16□□□□□ -2.22
SHC1P29353 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
SHC1P29353 RNU6-309P-201ENST00000364573 106 ntBASIC1.15□□□□□ -2.23
SHC1P29353 Y_RNA.440-201ENST00000384120 114 ntBASIC1.15□□□□□ -2.23
SHC1P29353 MIR653-201ENST00000385279 96 ntBASIC1.15□□□□□ -2.23
SHC1P29353 RNU6-321P-201ENST00000410912 106 ntBASIC1.15□□□□□ -2.23
SHC1P29353 SNORD123-201ENST00000459473 70 ntBASIC1.15□□□□□ -2.23
SHC1P29353 RPS26P48-201ENST00000491713 339 ntBASIC1.15□□□□□ -2.23
SHC1P29353 RNU6-406P-201ENST00000516470 107 ntBASIC1.15□□□□□ -2.23
SHC1P29353 MIR5197-201ENST00000583721 112 ntBASIC1.15□□□□□ -2.23
SHC1P29353 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
SHC1P29353 MIR8063-201ENST00000621930 81 ntBASIC1.15□□□□□ -2.23
SHC1P29353 AP001340.1-201ENST00000624405 217 ntBASIC1.15□□□□□ -2.23
SHC1P29353 AL157777.2-201ENST00000258070 137 ntBASIC1.14□□□□□ -2.23
SHC1P29353 Y_RNA.294-201ENST00000364916 102 ntBASIC1.14□□□□□ -2.23
SHC1P29353 RNU6-915P-201ENST00000364943 103 ntBASIC1.14□□□□□ -2.23
SHC1P29353 SNORD1A-201ENST00000364968 72 ntBASIC1.14□□□□□ -2.23
SHC1P29353 SNORA2.2-201ENST00000365473 135 ntBASIC1.14□□□□□ -2.23
SHC1P29353 MIR570-201ENST00000384917 97 ntBASIC1.14□□□□□ -2.23
SHC1P29353 AC087499.4-201ENST00000448505 178 ntBASIC1.14□□□□□ -2.23
SHC1P29353 TRMT112P2-201ENST00000512910 132 ntBASIC1.14□□□□□ -2.23
SHC1P29353 SNORA31.4-201ENST00000516049 129 ntBASIC1.14□□□□□ -2.23
SHC1P29353 RNA5SP236-201ENST00000516169 116 ntBASIC1.14□□□□□ -2.23
SHC1P29353 RNU6-1149P-201ENST00000516810 97 ntBASIC1.14□□□□□ -2.23
SHC1P29353 SNORA74.3-201ENST00000517108 154 ntBASIC1.14□□□□□ -2.23
SHC1P29353 AC090821.2-201ENST00000523552 176 ntBASIC1.14□□□□□ -2.23
SHC1P29353 MIR3121-201ENST00000579680 77 ntBASIC1.14□□□□□ -2.23
SHC1P29353 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
SHC1P29353 AL121890.5-201ENST00000620848 304 ntBASIC1.14□□□□□ -2.23
SHC1P29353 Y_RNA.4-201ENST00000362333 112 ntBASIC1.13□□□□□ -2.23
SHC1P29353 Y_RNA.241-201ENST00000364470 117 ntBASIC1.13□□□□□ -2.23
SHC1P29353 RNU6-81P-201ENST00000365608 104 ntBASIC1.13□□□□□ -2.23
SHC1P29353 SNORD26-201ENST00000384147 75 ntBASIC1.13□□□□□ -2.23
SHC1P29353 SNORD41-201ENST00000386967 70 ntBASIC1.13□□□□□ -2.23
SHC1P29353 AP001328.1-201ENST00000528550 176 ntBASIC1.13□□□□□ -2.23
SHC1P29353 AC090049.2-201ENST00000550377 109 ntBASIC1.13□□□□□ -2.23
SHC1P29353 AC091895.1-201ENST00000624494 256 ntBASIC1.13□□□□□ -2.23
SHC1P29353 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.12□□□□□ -2.23
SHC1P29353 Y_RNA.120-201ENST00000363304 110 ntBASIC1.12□□□□□ -2.23
SHC1P29353 Y_RNA.164-201ENST00000363709 102 ntBASIC1.12□□□□□ -2.23
SHC1P29353 Y_RNA.327-201ENST00000365201 102 ntBASIC1.12□□□□□ -2.23
SHC1P29353 Y_RNA.351-201ENST00000365436 96 ntBASIC1.12□□□□□ -2.23
SHC1P29353 Y_RNA.370-201ENST00000365589 108 ntBASIC1.12□□□□□ -2.23
SHC1P29353 SNORA40-201ENST00000388090 126 ntBASIC1.12□□□□□ -2.23
SHC1P29353 SNORA40.5-201ENST00000391061 128 ntBASIC1.12□□□□□ -2.23
SHC1P29353 AC027119.1-201ENST00000440877 241 ntBASIC1.12□□□□□ -2.23
SHC1P29353 TMSB4XP3-201ENST00000445144 114 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms