Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC063976.4-201ENST00000421971 163 ntBASIC0.83□□□□□ -2.28
GDF1P27539 RNU4-71P-201ENST00000516258 113 ntBASIC0.83□□□□□ -2.28
GDF1P27539 RNU6-504P-201ENST00000516568 104 ntBASIC0.83□□□□□ -2.28
GDF1P27539 RNU6-126P-201ENST00000516685 103 ntBASIC0.83□□□□□ -2.28
GDF1P27539 SNORD36C-201ENST00000516733 66 ntBASIC0.83□□□□□ -2.28
GDF1P27539 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
GDF1P27539 MIR4791-201ENST00000607666 84 ntBASIC0.83□□□□□ -2.28
GDF1P27539 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.83□□□□□ -2.28
GDF1P27539 SNORD115-34-201ENST00000362441 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-12-201ENST00000362583 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-29-201ENST00000362834 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-9-201ENST00000362912 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-21-201ENST00000362963 81 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-14-201ENST00000363090 81 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-13-201ENST00000363358 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-41-201ENST00000363608 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-11-201ENST00000363616 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-5-201ENST00000363633 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 RNU6-103P-201ENST00000363686 107 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-39-201ENST00000363694 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-4-201ENST00000363810 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-16-201ENST00000363887 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-6-201ENST00000363942 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-42-201ENST00000364273 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORA20.1-201ENST00000364790 130 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-15-201ENST00000364809 81 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-1-201ENST00000364961 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-26-201ENST00000365067 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-10-201ENST00000365073 81 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORA1.2-201ENST00000365189 134 ntBASIC0.82□□□□□ -2.28
GDF1P27539 Y_RNA.355-201ENST00000365462 98 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-43-201ENST00000365503 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-36-201ENST00000365629 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORA1-201ENST00000384107 130 ntBASIC0.82□□□□□ -2.28
GDF1P27539 RNU4-43P-201ENST00000410628 137 ntBASIC0.82□□□□□ -2.28
GDF1P27539 RNU2-70P-201ENST00000410718 179 ntBASIC0.82□□□□□ -2.28
GDF1P27539 AF228730.3-201ENST00000436691 102 ntBASIC0.82□□□□□ -2.28
GDF1P27539 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.82□□□□□ -2.28
GDF1P27539 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.82□□□□□ -2.28
GDF1P27539 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.82□□□□□ -2.28
GDF1P27539 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
GDF1P27539 MIR548AO-201ENST00000579992 96 ntBASIC0.82□□□□□ -2.28
GDF1P27539 MIR4744-201ENST00000581563 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
GDF1P27539 SNORD115-40-201ENST00000606510 82 ntBASIC0.82□□□□□ -2.28
GDF1P27539 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
GDF1P27539 AC008163.1-202ENST00000636004 2889 ntBASIC0.82□□□□□ -2.28
GDF1P27539 Y_RNA.199-201ENST00000364014 102 ntBASIC0.81□□□□□ -2.28
GDF1P27539 RNU6-654P-201ENST00000364373 107 ntBASIC0.81□□□□□ -2.28
GDF1P27539 Y_RNA.241-201ENST00000364470 117 ntBASIC0.81□□□□□ -2.28
GDF1P27539 SNORA51.10-201ENST00000384418 136 ntBASIC0.81□□□□□ -2.28
GDF1P27539 MIR518E-201ENST00000385252 88 ntBASIC0.81□□□□□ -2.28
GDF1P27539 RNU6-578P-201ENST00000390980 103 ntBASIC0.81□□□□□ -2.28
GDF1P27539 RNU6-847P-201ENST00000411115 108 ntBASIC0.81□□□□□ -2.28
GDF1P27539 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
GDF1P27539 AC087499.4-201ENST00000448505 178 ntBASIC0.81□□□□□ -2.28
GDF1P27539 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
GDF1P27539 SNORA18.4-201ENST00000516440 124 ntBASIC0.81□□□□□ -2.28
GDF1P27539 RNU6-197P-201ENST00000516680 100 ntBASIC0.81□□□□□ -2.28
GDF1P27539 AP003484.1-201ENST00000530974 250 ntBASIC0.81□□□□□ -2.28
GDF1P27539 RNU2-4P-201ENST00000606190 192 ntBASIC0.81□□□□□ -2.28
GDF1P27539 SEPT14P17-201ENST00000617978 177 ntBASIC0.81□□□□□ -2.28
GDF1P27539 AC243994.1-201ENST00000618627 109 ntBASIC0.81□□□□□ -2.28
GDF1P27539 MIR6516-201ENST00000630554 81 ntBASIC0.81□□□□□ -2.28
GDF1P27539 MIR376A2-201ENST00000636782 80 ntBASIC0.81□□□□□ -2.28
GDF1P27539 Y_RNA.7-201ENST00000362352 102 ntBASIC0.8□□□□□ -2.28
GDF1P27539 Y_RNA.571-201ENST00000384753 98 ntBASIC0.8□□□□□ -2.28
GDF1P27539 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
GDF1P27539 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
GDF1P27539 AC009779.6-201ENST00000603972 165 ntBASIC0.8□□□□□ -2.28
GDF1P27539 AP000942.4-201ENST00000604811 241 ntBASIC0.8□□□□□ -2.28
GDF1P27539 AC134878.1-201ENST00000619901 243 ntBASIC0.8□□□□□ -2.28
GDF1P27539 MIR6734-201ENST00000621166 68 ntBASIC0.8□□□□□ -2.28
GDF1P27539 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
GDF1P27539 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
GDF1P27539 Y_RNA.121-201ENST00000363309 113 ntBASIC0.79□□□□□ -2.28
GDF1P27539 RNU6-728P-201ENST00000365375 104 ntBASIC0.79□□□□□ -2.28
GDF1P27539 SNORA40.5-201ENST00000391061 128 ntBASIC0.79□□□□□ -2.28
GDF1P27539 SNORD77.3-201ENST00000391113 65 ntBASIC0.79□□□□□ -2.28
GDF1P27539 RNU6-918P-201ENST00000391219 106 ntBASIC0.79□□□□□ -2.28
GDF1P27539 SNORA26-201ENST00000391286 122 ntBASIC0.79□□□□□ -2.28
GDF1P27539 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.79□□□□□ -2.28
GDF1P27539 AC090844.1-201ENST00000422019 156 ntBASIC0.79□□□□□ -2.28
GDF1P27539 RNU7-90P-201ENST00000459216 62 ntBASIC0.79□□□□□ -2.28
GDF1P27539 RNA5SP220-201ENST00000516298 104 ntBASIC0.79□□□□□ -2.28
GDF1P27539 RNU11-2P-201ENST00000516898 142 ntBASIC0.79□□□□□ -2.28
GDF1P27539 MIR7111-201ENST00000619751 72 ntBASIC0.79□□□□□ -2.28
GDF1P27539 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.79□□□□□ -2.28
GDF1P27539 MIR411-201ENST00000362239 96 ntBASIC0.78□□□□□ -2.28
GDF1P27539 Y_RNA.330-201ENST00000365230 109 ntBASIC0.78□□□□□ -2.28
GDF1P27539 RNU6-47P-201ENST00000383866 107 ntBASIC0.78□□□□□ -2.28
GDF1P27539 SNORA27-201ENST00000384323 126 ntBASIC0.78□□□□□ -2.28
GDF1P27539 RNU6-913P-201ENST00000390913 95 ntBASIC0.78□□□□□ -2.28
GDF1P27539 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
GDF1P27539 AL121914.1-201ENST00000450188 156 ntBASIC0.78□□□□□ -2.28
GDF1P27539 AC130289.1-201ENST00000577321 73 ntBASIC0.78□□□□□ -2.28
GDF1P27539 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
GDF1P27539 MIR4661-201ENST00000582720 75 ntBASIC0.78□□□□□ -2.28
GDF1P27539 SNORA4-201ENST00000584302 138 ntBASIC0.78□□□□□ -2.28
GDF1P27539 AC131055.1-201ENST00000584626 316 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms