Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
XPAP23025 MTATP6P21-201ENST00000440681 189 ntBASIC1.9□□□□□ -2.11
XPAP23025 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
XPAP23025 RNU6-659P-201ENST00000516454 104 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-40-201ENST00000606510 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 AC091932.4-201ENST00000623386 200 ntBASIC1.9□□□□□ -2.11
XPAP23025 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
XPAP23025 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.89□□□□□ -2.11
XPAP23025 SNORA74.3-201ENST00000517108 154 ntBASIC1.89□□□□□ -2.11
XPAP23025 AC015688.6-201ENST00000577737 104 ntBASIC1.89□□□□□ -2.11
XPAP23025 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.89□□□□□ -2.11
XPAP23025 AL596211.1-201ENST00000569873 2277 ntBASIC1.89□□□□□ -2.11
XPAP23025 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
XPAP23025 MIR653-201ENST00000385279 96 ntBASIC1.88□□□□□ -2.11
XPAP23025 AL627390.1-201ENST00000396055 340 ntBASIC1.88□□□□□ -2.11
XPAP23025 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
XPAP23025 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.88□□□□□ -2.11
XPAP23025 AC008267.6-201ENST00000441664 139 ntBASIC1.88□□□□□ -2.11
XPAP23025 RPS29P24-201ENST00000486345 171 ntBASIC1.88□□□□□ -2.11
XPAP23025 RNU6-313P-201ENST00000516317 112 ntBASIC1.88□□□□□ -2.11
XPAP23025 RNU6-479P-201ENST00000516348 105 ntBASIC1.88□□□□□ -2.11
XPAP23025 RNU6-781P-201ENST00000516377 101 ntBASIC1.88□□□□□ -2.11
XPAP23025 RNU6-548P-201ENST00000517083 115 ntBASIC1.88□□□□□ -2.11
XPAP23025 RNU6-349P-201ENST00000362402 107 ntBASIC1.87□□□□□ -2.11
XPAP23025 RNU1-133P-201ENST00000364867 167 ntBASIC1.87□□□□□ -2.11
XPAP23025 U8.13-201ENST00000390842 128 ntBASIC1.87□□□□□ -2.11
XPAP23025 Y_RNA.630-201ENST00000411370 108 ntBASIC1.87□□□□□ -2.11
XPAP23025 RNU6-998P-201ENST00000515894 101 ntBASIC1.87□□□□□ -2.11
XPAP23025 RNU2-13P-201ENST00000515909 113 ntBASIC1.87□□□□□ -2.11
XPAP23025 RNU6-772P-201ENST00000516042 105 ntBASIC1.87□□□□□ -2.11
XPAP23025 RNU6-240P-201ENST00000516098 97 ntBASIC1.87□□□□□ -2.11
XPAP23025 AC090049.2-201ENST00000550377 109 ntBASIC1.87□□□□□ -2.11
XPAP23025 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.87□□□□□ -2.11
XPAP23025 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
XPAP23025 WWP1P1-201ENST00000466609 2769 ntBASIC1.86□□□□□ -2.11
XPAP23025 Y_RNA.366-201ENST00000365540 102 ntBASIC1.86□□□□□ -2.11
XPAP23025 Y_RNA.617-201ENST00000410920 90 ntBASIC1.86□□□□□ -2.11
XPAP23025 AL591806.2-201ENST00000433122 173 ntBASIC1.86□□□□□ -2.11
XPAP23025 snoU13.9-201ENST00000458927 103 ntBASIC1.86□□□□□ -2.11
XPAP23025 RNU2-11P-201ENST00000459191 187 ntBASIC1.86□□□□□ -2.11
XPAP23025 RNU7-45P-201ENST00000459460 63 ntBASIC1.86□□□□□ -2.11
XPAP23025 RN7SKP19-201ENST00000516016 252 ntBASIC1.86□□□□□ -2.11
XPAP23025 RNU6-922P-201ENST00000516753 99 ntBASIC1.86□□□□□ -2.11
XPAP23025 RNU7-70P-201ENST00000516941 66 ntBASIC1.86□□□□□ -2.11
XPAP23025 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
XPAP23025 MIR6845-201ENST00000613182 61 ntBASIC1.86□□□□□ -2.11
XPAP23025 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.86□□□□□ -2.11
XPAP23025 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
XPAP23025 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
XPAP23025 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
XPAP23025 RNA5SP205-201ENST00000364653 136 ntBASIC1.85□□□□□ -2.11
XPAP23025 SNORA1.2-201ENST00000365189 134 ntBASIC1.85□□□□□ -2.11
XPAP23025 RNU6-1081P-201ENST00000384537 107 ntBASIC1.85□□□□□ -2.11
XPAP23025 SNORD41-201ENST00000386967 70 ntBASIC1.85□□□□□ -2.11
XPAP23025 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
XPAP23025 RNU7-80P-201ENST00000459562 61 ntBASIC1.85□□□□□ -2.11
XPAP23025 AC108210.2-201ENST00000503681 201 ntBASIC1.85□□□□□ -2.11
XPAP23025 RNU6-1061P-201ENST00000516530 99 ntBASIC1.85□□□□□ -2.11
XPAP23025 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.85□□□□□ -2.11
XPAP23025 RNU6-958P-201ENST00000516995 106 ntBASIC1.85□□□□□ -2.11
XPAP23025 AC133485.4-201ENST00000561835 220 ntBASIC1.85□□□□□ -2.11
XPAP23025 AC138907.4-201ENST00000570107 226 ntBASIC1.85□□□□□ -2.11
XPAP23025 MIR4524B-201ENST00000581569 115 ntBASIC1.85□□□□□ -2.11
XPAP23025 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
XPAP23025 MIR4791-201ENST00000607666 84 ntBASIC1.85□□□□□ -2.11
XPAP23025 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
XPAP23025 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
XPAP23025 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
XPAP23025 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
XPAP23025 RNU6-1290P-201ENST00000362957 109 ntBASIC1.84□□□□□ -2.11
XPAP23025 RNU6-647P-201ENST00000364243 107 ntBASIC1.84□□□□□ -2.11
XPAP23025 RNU4-16P-201ENST00000364737 141 ntBASIC1.84□□□□□ -2.11
XPAP23025 SNORA26.9-201ENST00000391322 122 ntBASIC1.84□□□□□ -2.11
XPAP23025 RNU7-96P-201ENST00000459535 64 ntBASIC1.84□□□□□ -2.11
XPAP23025 MIR548AI-201ENST00000579940 88 ntBASIC1.84□□□□□ -2.11
XPAP23025 MIR4764-201ENST00000580680 88 ntBASIC1.84□□□□□ -2.11
XPAP23025 MIR4285-201ENST00000581001 85 ntBASIC1.84□□□□□ -2.11
XPAP23025 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.84□□□□□ -2.11
XPAP23025 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
XPAP23025 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
XPAP23025 AC243994.1-201ENST00000618627 109 ntBASIC1.84□□□□□ -2.11
XPAP23025 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.84□□□□□ -2.11
XPAP23025 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.84□□□□□ -2.11
XPAP23025 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.84□□□□□ -2.11
XPAP23025 MIR302D-201ENST00000362275 68 ntBASIC1.83□□□□□ -2.12
XPAP23025 RNU6-690P-201ENST00000365242 106 ntBASIC1.83□□□□□ -2.12
XPAP23025 RNY1P6-201ENST00000384193 109 ntBASIC1.83□□□□□ -2.12
XPAP23025 RNU6-913P-201ENST00000390913 95 ntBASIC1.83□□□□□ -2.12
XPAP23025 AL035398.1-201ENST00000430869 322 ntBASIC1.83□□□□□ -2.12
XPAP23025 snoU13.23-201ENST00000458863 104 ntBASIC1.83□□□□□ -2.12
XPAP23025 RNU7-67P-201ENST00000459003 62 ntBASIC1.83□□□□□ -2.12
XPAP23025 AC107297.1-201ENST00000459991 176 ntBASIC1.83□□□□□ -2.12
XPAP23025 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.83□□□□□ -2.12
XPAP23025 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
XPAP23025 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.83□□□□□ -2.12
XPAP23025 MIR4422-201ENST00000581938 83 ntBASIC1.83□□□□□ -2.12
XPAP23025 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.83□□□□□ -2.12
XPAP23025 AC084768.2-201ENST00000622736 221 ntBASIC1.83□□□□□ -2.12
XPAP23025 AP000648.3-201ENST00000623539 4507 ntBASIC1.82□□□□□ -2.12
XPAP23025 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 237.6 ms