Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-199P-201ENST00000362954 107 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 RNU6-1138P-201ENST00000365359 106 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 Y_RNA.435-201ENST00000384095 112 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 Y_RNA.572-201ENST00000384757 98 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 MIR15B-201ENST00000385045 98 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 MIR136-201ENST00000385207 82 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 MIR660-201ENST00000385235 97 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 MIR653-201ENST00000385279 96 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
COL5A1P20908 RNU6-1228P-201ENST00000391014 107 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 Y_RNA.793-201ENST00000411222 111 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.7□□□□□ -2.3
COL5A1P20908 AL138752.1-201ENST00000452964 351 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 AC022559.1-201ENST00000520905 205 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 AC008507.4-201ENST00000585464 127 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 AC243829.3-201ENST00000622177 108 ntBASIC0.7□□□□□ -2.3
COL5A1P20908 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
COL5A1P20908 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
COL5A1P20908 MIR26B-201ENST00000362251 77 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 RNU6-1123P-201ENST00000362347 106 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 Y_RNA.24-201ENST00000362508 103 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 RNU6-1209P-201ENST00000363655 107 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 RNU6-312P-201ENST00000364629 107 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 Y_RNA.336-201ENST00000365307 109 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 RNU6-597P-201ENST00000365620 102 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 Y_RNA.432-201ENST00000384087 111 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 MIR548I3-201ENST00000408378 149 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 MIR548I1-201ENST00000408810 149 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 AL161935.2-201ENST00000414627 60 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.69□□□□□ -2.3
COL5A1P20908 CALM2P4-201ENST00000430810 426 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 RNA5SP404-201ENST00000517118 132 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 AC090049.2-201ENST00000550377 109 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.69□□□□□ -2.3
COL5A1P20908 DNAJC19P2-201ENST00000593340 302 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 AL365205.2-201ENST00000594586 68 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 U6.106-201ENST00000636360 105 ntBASIC0.69□□□□□ -2.3
COL5A1P20908 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
COL5A1P20908 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 RNU4-84P-201ENST00000364200 139 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 MIR526A1-201ENST00000384897 85 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AL034345.1-201ENST00000407768 123 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 RNU6-1054P-201ENST00000411293 104 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 NDUFA4P2-201ENST00000489989 244 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 SNORD111.1-201ENST00000516421 86 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 SNORA31.10-201ENST00000516482 106 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AC004812.1-201ENST00000540773 146 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 MIR4662B-201ENST00000579498 81 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AC097639.2-201ENST00000603159 172 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AC096720.1-201ENST00000604441 183 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 GHRLOS.1-201ENST00000610995 70 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 FTX_2.1-201ENST00000618816 94 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AL627230.5-201ENST00000619807 58 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AL365265.1-201ENST00000621045 234 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 RNU6-1082P-201ENST00000364574 107 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 Y_RNA.280-201ENST00000364765 112 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 Y_RNA.304-201ENST00000365011 112 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 Y_RNA.515-201ENST00000384535 112 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 SNORD72-201ENST00000390994 80 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 SNORA40.5-201ENST00000391061 128 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 RNU4-43P-201ENST00000410628 137 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AC093850.1-201ENST00000454121 251 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AC099513.1-201ENST00000490423 301 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.68□□□□□ -2.3
COL5A1P20908 RNU6-561P-201ENST00000516222 102 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 SNORA18.4-201ENST00000516440 124 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 RNU6-182P-201ENST00000516970 105 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AC090142.3-201ENST00000519012 385 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 MIR3646-201ENST00000578301 84 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 MIR3937-201ENST00000580135 106 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AL357312.1-201ENST00000603879 298 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AC134878.1-201ENST00000619901 243 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 AC106754.2-201ENST00000623006 233 ntBASIC0.68□□□□□ -2.3
COL5A1P20908 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
COL5A1P20908 MIR424-201ENST00000362227 98 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 Y_RNA.29-201ENST00000362570 113 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 Y_RNA.121-201ENST00000363309 113 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 Y_RNA.170-201ENST00000363746 110 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 SNORD115-28-201ENST00000363931 81 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 snoU2_19.4-201ENST00000364329 80 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 RNU6-209P-201ENST00000384118 107 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 RNU6-125P-201ENST00000384505 107 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 Y_RNA.537-201ENST00000384626 109 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 RNU6-768P-201ENST00000384683 107 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.67□□□□□ -2.3
COL5A1P20908 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.67□□□□□ -2.3
COL5A1P20908 RPL39P28-201ENST00000465655 155 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 Y_RNA.797-201ENST00000515977 94 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 Y_RNA.700-201ENST00000516806 100 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 MIR4764-201ENST00000580680 88 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 MIR3668-201ENST00000582138 75 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 MIR548AR-201ENST00000582191 57 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 HSPE1P19-201ENST00000603327 295 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 AL121890.5-201ENST00000620848 304 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 MIR6079-201ENST00000635807 62 ntBASIC0.67□□□□□ -2.3
COL5A1P20908 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 RNU6-1020P-201ENST00000363684 107 ntBASIC0.66□□□□□ -2.3
COL5A1P20908 Y_RNA.233-201ENST00000364407 101 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms