Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 DNAJC19P2-201ENST00000593340 302 ntBASIC1.41□□□□□ -2.18
RXRAP19793 AL359821.1-201ENST00000605519 182 ntBASIC1.41□□□□□ -2.18
RXRAP19793 SNORA25.9-201ENST00000365087 128 ntBASIC1.4□□□□□ -2.19
RXRAP19793 RNU4-11P-201ENST00000365287 132 ntBASIC1.4□□□□□ -2.19
RXRAP19793 RNU6-53P-201ENST00000365367 106 ntBASIC1.4□□□□□ -2.19
RXRAP19793 Y_RNA.393-201ENST00000383936 102 ntBASIC1.4□□□□□ -2.19
RXRAP19793 RNU6-768P-201ENST00000384683 107 ntBASIC1.4□□□□□ -2.19
RXRAP19793 RNU4-61P-201ENST00000411243 107 ntBASIC1.4□□□□□ -2.19
RXRAP19793 AC245047.7-201ENST00000440265 293 ntBASIC1.4□□□□□ -2.19
RXRAP19793 SNORA18.7-201ENST00000516910 131 ntBASIC1.4□□□□□ -2.19
RXRAP19793 AL096861.1-201ENST00000610899 123 ntBASIC1.4□□□□□ -2.19
RXRAP19793 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.4□□□□□ -2.19
RXRAP19793 RNU6-978P-201ENST00000364371 103 ntBASIC1.39□□□□□ -2.19
RXRAP19793 RNU6-818P-201ENST00000364837 108 ntBASIC1.39□□□□□ -2.19
RXRAP19793 Y_RNA.400-201ENST00000383963 111 ntBASIC1.39□□□□□ -2.19
RXRAP19793 SNORD37.2-201ENST00000391075 66 ntBASIC1.39□□□□□ -2.19
RXRAP19793 RNU6-365P-201ENST00000517113 106 ntBASIC1.39□□□□□ -2.19
RXRAP19793 MIR4764-201ENST00000580680 88 ntBASIC1.39□□□□□ -2.19
RXRAP19793 Y_RNA.66-201ENST00000362862 102 ntBASIC1.38□□□□□ -2.19
RXRAP19793 Y_RNA.215-201ENST00000364204 112 ntBASIC1.38□□□□□ -2.19
RXRAP19793 MIR520C-201ENST00000385005 87 ntBASIC1.38□□□□□ -2.19
RXRAP19793 RNU6-321P-201ENST00000410912 106 ntBASIC1.38□□□□□ -2.19
RXRAP19793 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.38□□□□□ -2.19
RXRAP19793 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.38□□□□□ -2.19
RXRAP19793 RNU4-57P-201ENST00000515980 135 ntBASIC1.38□□□□□ -2.19
RXRAP19793 SNORA31.4-201ENST00000516049 129 ntBASIC1.38□□□□□ -2.19
RXRAP19793 Y_RNA.666-201ENST00000516187 112 ntBASIC1.38□□□□□ -2.19
RXRAP19793 RNU6-947P-201ENST00000516264 106 ntBASIC1.38□□□□□ -2.19
RXRAP19793 RNU6-504P-201ENST00000516568 104 ntBASIC1.38□□□□□ -2.19
RXRAP19793 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.38□□□□□ -2.19
RXRAP19793 MIR3192-201ENST00000584920 77 ntBASIC1.38□□□□□ -2.19
RXRAP19793 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.38□□□□□ -2.19
RXRAP19793 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.38□□□□□ -2.19
RXRAP19793 RNA5SP327-201ENST00000362494 101 ntBASIC1.37□□□□□ -2.19
RXRAP19793 SNORA25.7-201ENST00000364375 127 ntBASIC1.37□□□□□ -2.19
RXRAP19793 Y_RNA.327-201ENST00000365201 102 ntBASIC1.37□□□□□ -2.19
RXRAP19793 RNU6-597P-201ENST00000365620 102 ntBASIC1.37□□□□□ -2.19
RXRAP19793 SNORD24-201ENST00000383884 75 ntBASIC1.37□□□□□ -2.19
RXRAP19793 Y_RNA.488-201ENST00000384403 102 ntBASIC1.37□□□□□ -2.19
RXRAP19793 MIR499A-201ENST00000384903 122 ntBASIC1.37□□□□□ -2.19
RXRAP19793 SNORA75.5-201ENST00000391291 81 ntBASIC1.37□□□□□ -2.19
RXRAP19793 U8.17-201ENST00000391292 132 ntBASIC1.37□□□□□ -2.19
RXRAP19793 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.37□□□□□ -2.19
RXRAP19793 snoU13.25-201ENST00000458945 104 ntBASIC1.37□□□□□ -2.19
RXRAP19793 AC048334.1-201ENST00000477975 159 ntBASIC1.37□□□□□ -2.19
RXRAP19793 AL133373.1-201ENST00000497098 94 ntBASIC1.37□□□□□ -2.19
RXRAP19793 SNORA31.2-201ENST00000516019 134 ntBASIC1.37□□□□□ -2.19
RXRAP19793 RNU6-1270P-201ENST00000517128 108 ntBASIC1.37□□□□□ -2.19
RXRAP19793 AC007751.1-201ENST00000529260 376 ntBASIC1.37□□□□□ -2.19
RXRAP19793 MIR3646-201ENST00000578301 84 ntBASIC1.37□□□□□ -2.19
RXRAP19793 MIR6844-201ENST00000637122 62 ntBASIC1.37□□□□□ -2.19
RXRAP19793 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RXRAP19793 RNU6-1336P-201ENST00000383886 109 ntBASIC1.36□□□□□ -2.19
RXRAP19793 SNORD61-201ENST00000384252 73 ntBASIC1.36□□□□□ -2.19
RXRAP19793 MIR569-201ENST00000385228 96 ntBASIC1.36□□□□□ -2.19
RXRAP19793 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
RXRAP19793 AL392103.1-201ENST00000447000 198 ntBASIC1.36□□□□□ -2.19
RXRAP19793 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.36□□□□□ -2.19
RXRAP19793 SNORA25.12-201ENST00000516202 82 ntBASIC1.36□□□□□ -2.19
RXRAP19793 AP003716.2-201ENST00000528260 108 ntBASIC1.36□□□□□ -2.19
RXRAP19793 AC112693.2-201ENST00000556538 232 ntBASIC1.36□□□□□ -2.19
RXRAP19793 MIR548X2-201ENST00000579776 100 ntBASIC1.36□□□□□ -2.19
RXRAP19793 MIR548AR-201ENST00000582191 57 ntBASIC1.36□□□□□ -2.19
RXRAP19793 PRELID3BP2-201ENST00000605362 201 ntBASIC1.36□□□□□ -2.19
RXRAP19793 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.36□□□□□ -2.19
RXRAP19793 RNU6-888P-201ENST00000363010 101 ntBASIC1.35□□□□□ -2.19
RXRAP19793 Y_RNA.343-201ENST00000365354 112 ntBASIC1.35□□□□□ -2.19
RXRAP19793 Y_RNA.547-201ENST00000384654 119 ntBASIC1.35□□□□□ -2.19
RXRAP19793 MIR613-201ENST00000385248 95 ntBASIC1.35□□□□□ -2.19
RXRAP19793 MIR513C-201ENST00000401352 84 ntBASIC1.35□□□□□ -2.19
RXRAP19793 MIR548O-201ENST00000408583 114 ntBASIC1.35□□□□□ -2.19
RXRAP19793 RNU6-588P-201ENST00000410281 105 ntBASIC1.35□□□□□ -2.19
RXRAP19793 RNU6-693P-201ENST00000516134 107 ntBASIC1.35□□□□□ -2.19
RXRAP19793 RNU6-426P-201ENST00000516464 97 ntBASIC1.35□□□□□ -2.19
RXRAP19793 RNU7-25P-201ENST00000516544 62 ntBASIC1.35□□□□□ -2.19
RXRAP19793 AC015726.2-201ENST00000620112 122 ntBASIC1.35□□□□□ -2.19
RXRAP19793 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RXRAP19793 RNA5SP48-201ENST00000363969 126 ntBASIC1.34□□□□□ -2.19
RXRAP19793 RNU6-1082P-201ENST00000364574 107 ntBASIC1.34□□□□□ -2.19
RXRAP19793 SNORA1.2-201ENST00000365189 134 ntBASIC1.34□□□□□ -2.19
RXRAP19793 MIR548A2-201ENST00000384956 97 ntBASIC1.34□□□□□ -2.19
RXRAP19793 MIR518F-201ENST00000384973 87 ntBASIC1.34□□□□□ -2.19
RXRAP19793 SNORD28B-201ENST00000390993 75 ntBASIC1.34□□□□□ -2.19
RXRAP19793 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.34□□□□□ -2.19
RXRAP19793 RNU7-41P-201ENST00000515917 61 ntBASIC1.34□□□□□ -2.19
RXRAP19793 AL022345.2-201ENST00000606307 135 ntBASIC1.34□□□□□ -2.19
RXRAP19793 RNY1P11-201ENST00000363759 113 ntBASIC1.33□□□□□ -2.2
RXRAP19793 RNU6-704P-201ENST00000364162 103 ntBASIC1.33□□□□□ -2.2
RXRAP19793 SNORA1-201ENST00000384107 130 ntBASIC1.33□□□□□ -2.2
RXRAP19793 SNORA25-201ENST00000384384 134 ntBASIC1.33□□□□□ -2.2
RXRAP19793 Y_RNA.542-201ENST00000384641 111 ntBASIC1.33□□□□□ -2.2
RXRAP19793 Y_RNA.568-201ENST00000384742 113 ntBASIC1.33□□□□□ -2.2
RXRAP19793 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
RXRAP19793 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.33□□□□□ -2.2
RXRAP19793 TMSB4XP3-201ENST00000445144 114 ntBASIC1.33□□□□□ -2.2
RXRAP19793 RNA5SP272-201ENST00000516095 111 ntBASIC1.33□□□□□ -2.2
RXRAP19793 MIR3129-201ENST00000581095 76 ntBASIC1.33□□□□□ -2.2
RXRAP19793 AL365205.2-201ENST00000594586 68 ntBASIC1.33□□□□□ -2.2
RXRAP19793 MIR6078-201ENST00000611069 100 ntBASIC1.33□□□□□ -2.2
RXRAP19793 AC027335.2-201ENST00000624030 375 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms