Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 SNORD115-3-201ENST00000363100 82 ntBASIC2.71□□□□□ -1.98
NID1P14543 RNU6-865P-201ENST00000364772 107 ntBASIC2.71□□□□□ -1.98
NID1P14543 RNU6-524P-201ENST00000384270 107 ntBASIC2.71□□□□□ -1.98
NID1P14543 MIR519C-201ENST00000385053 87 ntBASIC2.71□□□□□ -1.98
NID1P14543 MIR548G-201ENST00000408442 89 ntBASIC2.71□□□□□ -1.98
NID1P14543 AC107016.2-201ENST00000547968 190 ntBASIC2.71□□□□□ -1.98
NID1P14543 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.71□□□□□ -1.98
NID1P14543 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.71□□□□□ -1.98
NID1P14543 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NID1P14543 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
NID1P14543 SNORA9.2-201ENST00000365361 133 ntBASIC2.7□□□□□ -1.98
NID1P14543 RNU6-1307P-201ENST00000391012 103 ntBASIC2.7□□□□□ -1.98
NID1P14543 RPL31P63-201ENST00000422565 375 ntBASIC2.7□□□□□ -1.98
NID1P14543 AC245047.7-201ENST00000440265 293 ntBASIC2.7□□□□□ -1.98
NID1P14543 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.7□□□□□ -1.98
NID1P14543 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.7□□□□□ -1.98
NID1P14543 AC093729.1-201ENST00000513074 128 ntBASIC2.7□□□□□ -1.98
NID1P14543 RNU6-56P-201ENST00000516986 93 ntBASIC2.7□□□□□ -1.98
NID1P14543 RNU6-90P-201ENST00000606352 106 ntBASIC2.7□□□□□ -1.98
NID1P14543 AL161431.1-201ENST00000618966 4205 ntBASIC2.7□□□□□ -1.98
NID1P14543 SNORD115-37-201ENST00000363768 82 ntBASIC2.69□□□□□ -1.98
NID1P14543 RNU6-461P-201ENST00000364195 107 ntBASIC2.69□□□□□ -1.98
NID1P14543 RNU6-342P-201ENST00000384521 104 ntBASIC2.69□□□□□ -1.98
NID1P14543 Y_RNA.565-201ENST00000384719 101 ntBASIC2.69□□□□□ -1.98
NID1P14543 AC022018.1-201ENST00000430685 241 ntBASIC2.69□□□□□ -1.98
NID1P14543 AL139132.1-201ENST00000431587 344 ntBASIC2.69□□□□□ -1.98
NID1P14543 RNU7-35P-201ENST00000517174 62 ntBASIC2.69□□□□□ -1.98
NID1P14543 MIR548AR-201ENST00000582191 57 ntBASIC2.69□□□□□ -1.98
NID1P14543 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.69□□□□□ -1.98
NID1P14543 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NID1P14543 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
NID1P14543 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NID1P14543 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NID1P14543 RNU1-58P-201ENST00000362413 163 ntBASIC2.68□□□□□ -1.98
NID1P14543 Y_RNA.448-201ENST00000384185 108 ntBASIC2.68□□□□□ -1.98
NID1P14543 RNU6-1067P-201ENST00000384752 107 ntBASIC2.68□□□□□ -1.98
NID1P14543 SNORD28B-201ENST00000390993 75 ntBASIC2.68□□□□□ -1.98
NID1P14543 MIR887-201ENST00000401258 79 ntBASIC2.68□□□□□ -1.98
NID1P14543 RNA5SP492-201ENST00000411330 114 ntBASIC2.68□□□□□ -1.98
NID1P14543 HMGN1P33-201ENST00000432945 451 ntBASIC2.68□□□□□ -1.98
NID1P14543 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.68□□□□□ -1.98
NID1P14543 RNU1-98P-201ENST00000458992 160 ntBASIC2.68□□□□□ -1.98
NID1P14543 SNORD123-201ENST00000459473 70 ntBASIC2.68□□□□□ -1.98
NID1P14543 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.68□□□□□ -1.98
NID1P14543 MIR5094-201ENST00000578766 85 ntBASIC2.68□□□□□ -1.98
NID1P14543 AC145423.2-201ENST00000610631 239 ntBASIC2.68□□□□□ -1.98
NID1P14543 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NID1P14543 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.68□□□□□ -1.98
NID1P14543 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.68□□□□□ -1.98
NID1P14543 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
NID1P14543 AC108206.1-201ENST00000570186 4159 ntBASIC2.68□□□□□ -1.98
NID1P14543 SNORD38.2-201ENST00000384470 69 ntBASIC2.67□□□□□ -1.98
NID1P14543 RNU6-851P-201ENST00000384565 107 ntBASIC2.67□□□□□ -1.98
NID1P14543 RNU6-1031P-201ENST00000384773 107 ntBASIC2.67□□□□□ -1.98
NID1P14543 MIR29C-201ENST00000385231 88 ntBASIC2.67□□□□□ -1.98
NID1P14543 SPINT5P-201ENST00000448174 155 ntBASIC2.67□□□□□ -1.98
NID1P14543 MIR6715A-201ENST00000615929 79 ntBASIC2.67□□□□□ -1.98
NID1P14543 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
NID1P14543 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
NID1P14543 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
NID1P14543 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NID1P14543 U8.9-201ENST00000365667 134 ntBASIC2.66□□□□□ -1.98
NID1P14543 Y_RNA.537-201ENST00000384626 109 ntBASIC2.66□□□□□ -1.98
NID1P14543 MIR512-1-201ENST00000384913 84 ntBASIC2.66□□□□□ -1.98
NID1P14543 RN7SKP123-201ENST00000410732 291 ntBASIC2.66□□□□□ -1.98
NID1P14543 AC093850.1-201ENST00000454121 251 ntBASIC2.66□□□□□ -1.98
NID1P14543 RNA5SP356-201ENST00000515972 94 ntBASIC2.66□□□□□ -1.98
NID1P14543 SNORD67.1-201ENST00000516618 108 ntBASIC2.66□□□□□ -1.98
NID1P14543 GTF3AP2-201ENST00000557014 266 ntBASIC2.66□□□□□ -1.98
NID1P14543 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.66□□□□□ -1.98
NID1P14543 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NID1P14543 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.66□□□□□ -1.98
NID1P14543 RNU6-1229P-201ENST00000364295 107 ntBASIC2.65□□□□□ -1.99
NID1P14543 Y_RNA.354-201ENST00000365448 111 ntBASIC2.65□□□□□ -1.99
NID1P14543 RNU6-613P-201ENST00000410412 108 ntBASIC2.65□□□□□ -1.99
NID1P14543 RNU6-1086P-201ENST00000410930 100 ntBASIC2.65□□□□□ -1.99
NID1P14543 RPS29P6-201ENST00000438196 145 ntBASIC2.65□□□□□ -1.99
NID1P14543 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.65□□□□□ -1.99
NID1P14543 Z96811.1-201ENST00000445880 108 ntBASIC2.65□□□□□ -1.99
NID1P14543 snoU13.16-201ENST00000459350 104 ntBASIC2.65□□□□□ -1.99
NID1P14543 AL513043.2-201ENST00000573941 143 ntBASIC2.65□□□□□ -1.99
NID1P14543 AL449363.1-201ENST00000617815 186 ntBASIC2.65□□□□□ -1.99
NID1P14543 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.99
NID1P14543 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.65□□□□□ -1.99
NID1P14543 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.65□□□□□ -1.99
NID1P14543 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NID1P14543 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
NID1P14543 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NID1P14543 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
NID1P14543 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NID1P14543 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
NID1P14543 RNU6-447P-201ENST00000410293 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 RNU6-1118P-201ENST00000410382 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 RNU6-1076P-201ENST00000410397 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 RNU6-355P-201ENST00000410427 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 RNU6-791P-201ENST00000410467 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 RNU6-705P-201ENST00000410601 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 RNU6-1100P-201ENST00000410691 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 RNU6-860P-201ENST00000410860 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 RNU6-1217P-201ENST00000411276 104 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms