Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AL358944.1-201ENST00000528537 144 ntBASIC-2.95□□□□□ -2.88
VCANP13611 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-2.95□□□□□ -2.88
VCANP13611 AC099654.9-201ENST00000637055 678 ntBASIC-2.95□□□□□ -2.88
VCANP13611 RNU6-816P-201ENST00000390914 107 ntBASIC-2.95□□□□□ -2.88
VCANP13611 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.95□□□□□ -2.88
VCANP13611 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.95□□□□□ -2.88
VCANP13611 RNU6-853P-201ENST00000364306 107 ntBASIC-2.95□□□□□ -2.88
VCANP13611 RNU6-878P-201ENST00000384578 110 ntBASIC-2.95□□□□□ -2.88
VCANP13611 GPR143P-201ENST00000434155 205 ntBASIC-2.95□□□□□ -2.88
VCANP13611 AC097635.1-201ENST00000450678 155 ntBASIC-2.95□□□□□ -2.88
VCANP13611 RNU6-345P-201ENST00000517001 107 ntBASIC-2.95□□□□□ -2.88
VCANP13611 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.95□□□□□ -2.88
VCANP13611 AP001836.1-201ENST00000604675 523 ntBASIC-2.95□□□□□ -2.88
VCANP13611 Y_RNA.601-201ENST00000410500 113 ntBASIC-2.96□□□□□ -2.88
VCANP13611 RNU7-88P-201ENST00000458752 63 ntBASIC-2.96□□□□□ -2.88
VCANP13611 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-2.96□□□□□ -2.88
VCANP13611 AL008718.3-201ENST00000610217 321 ntBASIC-2.96□□□□□ -2.88
VCANP13611 AC091931.1-201ENST00000623488 728 ntBASIC-2.96□□□□□ -2.88
VCANP13611 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.96□□□□□ -2.88
VCANP13611 Six3os1_7.1-201ENST00000621512 201 ntBASIC-2.96□□□□□ -2.88
VCANP13611 RNU6-1284P-201ENST00000363701 100 ntBASIC-2.97□□□□□ -2.88
VCANP13611 RNU6-378P-201ENST00000384324 107 ntBASIC-2.97□□□□□ -2.88
VCANP13611 RNU6-1245P-201ENST00000411130 106 ntBASIC-2.97□□□□□ -2.88
VCANP13611 RNU7-10P-201ENST00000607194 63 ntBASIC-2.97□□□□□ -2.88
VCANP13611 RNU6-181P-201ENST00000363225 107 ntBASIC-2.97□□□□□ -2.89
VCANP13611 RNU2-14P-201ENST00000411053 191 ntBASIC-2.97□□□□□ -2.89
VCANP13611 AC002542.1-201ENST00000440683 193 ntBASIC-2.97□□□□□ -2.89
VCANP13611 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-2.98□□□□□ -2.89
VCANP13611 RNU6-1287P-201ENST00000362914 107 ntBASIC-2.98□□□□□ -2.89
VCANP13611 MIR1255B2-201ENST00000408618 67 ntBASIC-2.98□□□□□ -2.89
VCANP13611 AC244670.1-201ENST00000436879 112 ntBASIC-2.98□□□□□ -2.89
VCANP13611 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-2.98□□□□□ -2.89
VCANP13611 SNORA72.3-201ENST00000365074 132 ntBASIC-2.98□□□□□ -2.89
VCANP13611 PISRT1.1-201ENST00000616930 107 ntBASIC-2.98□□□□□ -2.89
VCANP13611 RNU6-1179P-201ENST00000384667 107 ntBASIC-2.99□□□□□ -2.89
VCANP13611 MIR520D-201ENST00000385002 87 ntBASIC-2.99□□□□□ -2.89
VCANP13611 AC104563.1-201ENST00000476147 376 ntBASIC-2.99□□□□□ -2.89
VCANP13611 RNU6-75P-201ENST00000515944 104 ntBASIC-2.99□□□□□ -2.89
VCANP13611 RNU6-1129P-201ENST00000515964 104 ntBASIC-2.99□□□□□ -2.89
VCANP13611 MIR5006-201ENST00000583027 110 ntBASIC-2.99□□□□□ -2.89
VCANP13611 UBE2V1P11-201ENST00000411559 285 ntBASIC-2.99□□□□□ -2.89
VCANP13611 RNA5SP449-201ENST00000516871 130 ntBASIC-2.99□□□□□ -2.89
VCANP13611 RNU6-682P-201ENST00000363843 106 ntBASIC-3□□□□□ -2.89
VCANP13611 RNU6-143P-201ENST00000516942 93 ntBASIC-3□□□□□ -2.89
VCANP13611 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-3□□□□□ -2.89
VCANP13611 AC023158.1-201ENST00000561632 1025 ntBASIC-3□□□□□ -2.89
VCANP13611 AC022418.1-201ENST00000624118 445 ntBASIC-3□□□□□ -2.89
VCANP13611 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-3□□□□□ -2.89
VCANP13611 RNU7-67P-201ENST00000459003 62 ntBASIC-3□□□□□ -2.89
VCANP13611 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-3□□□□□ -2.89
VCANP13611 AC010486.2-201ENST00000505572 483 ntBASIC-3□□□□□ -2.89
VCANP13611 RNU6-528P-201ENST00000516926 100 ntBASIC-3□□□□□ -2.89
VCANP13611 RNU7-181P-201ENST00000517234 74 ntBASIC-3□□□□□ -2.89
VCANP13611 AC104072.1-201ENST00000568817 668 ntBASIC-3□□□□□ -2.89
VCANP13611 MIR4762-201ENST00000585261 75 ntBASIC-3□□□□□ -2.89
VCANP13611 AC021443.1-201ENST00000604478 211 ntBASIC-3□□□□□ -2.89
VCANP13611 Y_RNA.157-201ENST00000363638 102 ntBASIC-3.01□□□□□ -2.89
VCANP13611 AC005520.4-201ENST00000604337 90 ntBASIC-3.01□□□□□ -2.89
VCANP13611 AC096586.1-201ENST00000610267 561 ntBASIC-3.01□□□□□ -2.89
VCANP13611 RNA5SP133-201ENST00000363368 119 ntBASIC-3.01□□□□□ -2.89
VCANP13611 RNU6-166P-201ENST00000384371 107 ntBASIC-3.01□□□□□ -2.89
VCANP13611 Y_RNA.24-201ENST00000362508 103 ntBASIC-3.01□□□□□ -2.89
VCANP13611 EPS15P1-201ENST00000448836 336 ntBASIC-3.01□□□□□ -2.89
VCANP13611 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-3.01□□□□□ -2.89
VCANP13611 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-3.01□□□□□ -2.89
VCANP13611 AC005520.5-201ENST00000613926 164 ntBASIC-3.01□□□□□ -2.89
VCANP13611 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.02□□□□□ -2.89
VCANP13611 RNU6-376P-201ENST00000384731 106 ntBASIC-3.02□□□□□ -2.89
VCANP13611 Y_RNA.578-201ENST00000390903 88 ntBASIC-3.02□□□□□ -2.89
VCANP13611 RNU6-384P-201ENST00000364900 104 ntBASIC-3.02□□□□□ -2.89
VCANP13611 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.02□□□□□ -2.89
VCANP13611 RNU6-221P-201ENST00000459541 99 ntBASIC-3.02□□□□□ -2.89
VCANP13611 AC021451.1-201ENST00000523498 1129 ntBASIC-3.02□□□□□ -2.89
VCANP13611 RNU6-550P-201ENST00000391057 101 ntBASIC-3.03□□□□□ -2.89
VCANP13611 SNORD115-45-201ENST00000391078 81 ntBASIC-3.03□□□□□ -2.89
VCANP13611 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-3.03□□□□□ -2.89
VCANP13611 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-3.03□□□□□ -2.89
VCANP13611 AC124312.5-201ENST00000604451 268 ntBASIC-3.03□□□□□ -2.89
VCANP13611 MIR8055-201ENST00000610739 97 ntBASIC-3.03□□□□□ -2.89
VCANP13611 RNU6-324P-201ENST00000363957 106 ntBASIC-3.03□□□□□ -2.9
VCANP13611 SNORA63.6-201ENST00000364921 119 ntBASIC-3.04□□□□□ -2.9
VCANP13611 RNU7-182P-201ENST00000459009 62 ntBASIC-3.04□□□□□ -2.9
VCANP13611 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-3.04□□□□□ -2.9
VCANP13611 RNU6-246P-201ENST00000384702 107 ntBASIC-3.04□□□□□ -2.9
VCANP13611 AL365203.2-201ENST00000423444 196 ntBASIC-3.04□□□□□ -2.9
VCANP13611 MTCO2P6-201ENST00000463134 685 ntBASIC-3.04□□□□□ -2.9
VCANP13611 snoU2-30.1-201ENST00000365012 70 ntBASIC-3.05□□□□□ -2.9
VCANP13611 MIR586-201ENST00000385035 97 ntBASIC-3.05□□□□□ -2.9
VCANP13611 RNU7-172P-201ENST00000517125 64 ntBASIC-3.05□□□□□ -2.9
VCANP13611 AL133215.3-201ENST00000609801 448 ntBASIC-3.05□□□□□ -2.9
VCANP13611 RNU4-58P-201ENST00000363192 141 ntBASIC-3.06□□□□□ -2.9
VCANP13611 Y_RNA.395-201ENST00000383945 109 ntBASIC-3.06□□□□□ -2.9
VCANP13611 SNORA51.5-201ENST00000384126 131 ntBASIC-3.06□□□□□ -2.9
VCANP13611 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-3.06□□□□□ -2.9
VCANP13611 MTND1P24-201ENST00000552175 861 ntBASIC-3.06□□□□□ -2.9
VCANP13611 MIR3941-201ENST00000582572 103 ntBASIC-3.06□□□□□ -2.9
VCANP13611 AL669831.3-213ENST00000636676 183 ntBASIC-3.06□□□□□ -2.9
VCANP13611 RNU6-1014P-201ENST00000383940 103 ntBASIC-3.06□□□□□ -2.9
VCANP13611 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-3.06□□□□□ -2.9
VCANP13611 SNORD39.3-201ENST00000584451 71 ntBASIC-3.06□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 206.9 ms