Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SNORD115-1-201ENST00000364961 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-26-201ENST00000365067 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-10-201ENST00000365073 81 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORA1.2-201ENST00000365189 134 ntBASIC1.28□□□□□ -2.2
CDH1P12830 RNU4-11P-201ENST00000365287 132 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-43-201ENST00000365503 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 Y_RNA.370-201ENST00000365589 108 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-36-201ENST00000365629 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 Y_RNA.440-201ENST00000384120 114 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORA40.5-201ENST00000391061 128 ntBASIC1.28□□□□□ -2.2
CDH1P12830 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH1P12830 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORA18.4-201ENST00000516440 124 ntBASIC1.28□□□□□ -2.2
CDH1P12830 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH1P12830 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
CDH1P12830 AP000942.3-201ENST00000603702 160 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-40-201ENST00000606510 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.28□□□□□ -2.2
CDH1P12830 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.27□□□□□ -2.21
CDH1P12830 Y_RNA.251-201ENST00000364551 99 ntBASIC1.27□□□□□ -2.21
CDH1P12830 RNY1P5-201ENST00000383890 115 ntBASIC1.27□□□□□ -2.21
CDH1P12830 Y_RNA.400-201ENST00000383963 111 ntBASIC1.27□□□□□ -2.21
CDH1P12830 Y_RNA.497-201ENST00000384447 98 ntBASIC1.27□□□□□ -2.21
CDH1P12830 RNU6-1065P-201ENST00000384513 106 ntBASIC1.27□□□□□ -2.21
CDH1P12830 MIR520C-201ENST00000385005 87 ntBASIC1.27□□□□□ -2.21
CDH1P12830 SNORD37.2-201ENST00000391075 66 ntBASIC1.27□□□□□ -2.21
CDH1P12830 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
CDH1P12830 BTF3P4-201ENST00000418852 495 ntBASIC1.27□□□□□ -2.21
CDH1P12830 AC009474.2-201ENST00000451383 136 ntBASIC1.27□□□□□ -2.21
CDH1P12830 RNU7-197P-201ENST00000458836 62 ntBASIC1.27□□□□□ -2.21
CDH1P12830 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
CDH1P12830 SNORD111.1-201ENST00000516421 86 ntBASIC1.27□□□□□ -2.21
CDH1P12830 SCARNA15-202ENST00000516881 127 ntBASIC1.27□□□□□ -2.21
CDH1P12830 RNU6-165P-201ENST00000517170 99 ntBASIC1.27□□□□□ -2.21
CDH1P12830 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.27□□□□□ -2.21
CDH1P12830 AC090821.2-201ENST00000523552 176 ntBASIC1.27□□□□□ -2.21
CDH1P12830 AL512310.8-201ENST00000550183 120 ntBASIC1.27□□□□□ -2.21
CDH1P12830 AC112693.2-201ENST00000556538 232 ntBASIC1.27□□□□□ -2.21
CDH1P12830 MIR3664-201ENST00000579074 99 ntBASIC1.27□□□□□ -2.21
CDH1P12830 AL357312.1-201ENST00000603879 298 ntBASIC1.27□□□□□ -2.21
CDH1P12830 AL096861.1-201ENST00000610899 123 ntBASIC1.27□□□□□ -2.21
CDH1P12830 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH1P12830 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.27□□□□□ -2.21
CDH1P12830 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CDH1P12830 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CDH1P12830 MIR378A-201ENST00000362177 66 ntBASIC1.26□□□□□ -2.21
CDH1P12830 Y_RNA.215-201ENST00000364204 112 ntBASIC1.26□□□□□ -2.21
CDH1P12830 SNORA27-201ENST00000384323 126 ntBASIC1.26□□□□□ -2.21
CDH1P12830 MIR570-201ENST00000384917 97 ntBASIC1.26□□□□□ -2.21
CDH1P12830 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
CDH1P12830 RNU7-41P-201ENST00000515917 61 ntBASIC1.26□□□□□ -2.21
CDH1P12830 RNU6-902P-201ENST00000517212 91 ntBASIC1.26□□□□□ -2.21
CDH1P12830 MIR3192-201ENST00000584920 77 ntBASIC1.26□□□□□ -2.21
CDH1P12830 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CDH1P12830 Y_RNA.52-201ENST00000362760 96 ntBASIC1.25□□□□□ -2.21
CDH1P12830 SNORA7.1-201ENST00000363750 139 ntBASIC1.25□□□□□ -2.21
CDH1P12830 SNORA24-201ENST00000384096 131 ntBASIC1.25□□□□□ -2.21
CDH1P12830 RNU6-125P-201ENST00000384505 107 ntBASIC1.25□□□□□ -2.21
CDH1P12830 Y_RNA.537-201ENST00000384626 109 ntBASIC1.25□□□□□ -2.21
CDH1P12830 AP1B1P2-201ENST00000416196 106 ntBASIC1.25□□□□□ -2.21
CDH1P12830 RPL30P7-201ENST00000479312 323 ntBASIC1.25□□□□□ -2.21
CDH1P12830 RNU6-346P-201ENST00000516288 111 ntBASIC1.25□□□□□ -2.21
CDH1P12830 AC131055.1-201ENST00000584626 316 ntBASIC1.25□□□□□ -2.21
CDH1P12830 MIR4791-201ENST00000607666 84 ntBASIC1.25□□□□□ -2.21
CDH1P12830 AC008133.2-201ENST00000624540 351 ntBASIC1.25□□□□□ -2.21
CDH1P12830 MTND5P32-201ENST00000560711 1802 ntBASIC1.24□□□□□ -2.21
CDH1P12830 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDH1P12830 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CDH1P12830 RPS29P29-201ENST00000456396 171 ntBASIC1.24□□□□□ -2.21
CDH1P12830 snoU13.25-201ENST00000458945 104 ntBASIC1.24□□□□□ -2.21
CDH1P12830 RNU6-1149P-201ENST00000516810 97 ntBASIC1.24□□□□□ -2.21
CDH1P12830 RNU2-60P-201ENST00000517290 128 ntBASIC1.24□□□□□ -2.21
CDH1P12830 MIR548X2-201ENST00000579776 100 ntBASIC1.24□□□□□ -2.21
CDH1P12830 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.24□□□□□ -2.21
CDH1P12830 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CDH1P12830 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
CDH1P12830 RNU6-774P-201ENST00000363238 107 ntBASIC1.23□□□□□ -2.21
CDH1P12830 RNU6-746P-201ENST00000384112 109 ntBASIC1.23□□□□□ -2.21
CDH1P12830 MIR569-201ENST00000385228 96 ntBASIC1.23□□□□□ -2.21
CDH1P12830 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
CDH1P12830 AC107297.1-201ENST00000459991 176 ntBASIC1.23□□□□□ -2.21
CDH1P12830 RPS29P24-201ENST00000486345 171 ntBASIC1.23□□□□□ -2.21
CDH1P12830 RNU6-998P-201ENST00000515894 101 ntBASIC1.23□□□□□ -2.21
CDH1P12830 RNA5SP236-201ENST00000516169 116 ntBASIC1.23□□□□□ -2.21
CDH1P12830 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.23□□□□□ -2.21
CDH1P12830 AC243994.1-201ENST00000618627 109 ntBASIC1.23□□□□□ -2.21
CDH1P12830 AL121890.5-201ENST00000620848 304 ntBASIC1.23□□□□□ -2.21
CDH1P12830 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CDH1P12830 Y_RNA.488-201ENST00000384403 102 ntBASIC1.22□□□□□ -2.21
CDH1P12830 RNU6-1067P-201ENST00000384752 107 ntBASIC1.22□□□□□ -2.21
CDH1P12830 Y_RNA.584-201ENST00000391090 114 ntBASIC1.22□□□□□ -2.21
CDH1P12830 MIR513C-201ENST00000401352 84 ntBASIC1.22□□□□□ -2.21
CDH1P12830 SUMO1P3-201ENST00000439961 304 ntBASIC1.22□□□□□ -2.21
CDH1P12830 RNU7-96P-201ENST00000459535 64 ntBASIC1.22□□□□□ -2.21
CDH1P12830 SNORA31.4-201ENST00000516049 129 ntBASIC1.22□□□□□ -2.21
CDH1P12830 RNA5SP458-201ENST00000516188 119 ntBASIC1.22□□□□□ -2.21
CDH1P12830 SNORA25.12-201ENST00000516202 82 ntBASIC1.22□□□□□ -2.21
CDH1P12830 RNU6-947P-201ENST00000516264 106 ntBASIC1.22□□□□□ -2.21
CDH1P12830 Y_RNA.703-201ENST00000516846 111 ntBASIC1.22□□□□□ -2.21
CDH1P12830 MIR3133-201ENST00000583157 78 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms