Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 POLR2J4-204ENST00000418424 324 ntBASIC0.89□□□□□ -2.27
RAB40ALP0C0E4 MTCYBP9-201ENST00000431021 303 ntBASIC0.89□□□□□ -2.27
RAB40ALP0C0E4 SCARNA15.1-201ENST00000516384 125 ntBASIC0.89□□□□□ -2.27
RAB40ALP0C0E4 AC036111.3-201ENST00000526389 112 ntBASIC0.89□□□□□ -2.27
RAB40ALP0C0E4 AL442067.1-201ENST00000613261 223 ntBASIC0.89□□□□□ -2.27
RAB40ALP0C0E4 AC106800.4-201ENST00000614905 153 ntBASIC0.89□□□□□ -2.27
RAB40ALP0C0E4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.262-201ENST00000364641 102 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 RNU4-17P-201ENST00000365598 141 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 RNU6-484P-201ENST00000384016 107 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 SNORA2B-201ENST00000384583 137 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 RNU6-1228P-201ENST00000391014 107 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 RNU6-994P-201ENST00000410507 111 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 RPS3AP1-201ENST00000413190 320 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 AC067940.1-201ENST00000458411 300 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 SNORD127-201ENST00000458892 86 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 snoU13.16-201ENST00000459350 104 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 RNU6-453P-201ENST00000516819 85 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 AP003484.1-201ENST00000530974 250 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 MIR4643-201ENST00000577473 78 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 MIR4719-201ENST00000585233 84 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 AP000942.4-201ENST00000604811 241 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 AC134878.1-201ENST00000619901 243 ntBASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.88□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.66-201ENST00000362862 102 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.91-201ENST00000363042 107 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 SNORD113.3-201ENST00000364630 78 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.354-201ENST00000365448 111 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 SNORA24-201ENST00000384096 131 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.494-201ENST00000384432 111 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.556-201ENST00000384677 113 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 SNORA40.5-201ENST00000391061 128 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 RNA5SP95-201ENST00000410319 137 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 RNU6-1045P-201ENST00000516321 107 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 RNA5SP255-201ENST00000516370 107 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 SNORA18.4-201ENST00000516440 124 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 RNA5SP153-201ENST00000516498 76 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 RNU6-94P-201ENST00000607728 107 ntBASIC0.87□□□□□ -2.27
RAB40ALP0C0E4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 RNU6-653P-201ENST00000363074 106 ntBASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.133-201ENST00000363428 110 ntBASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 SNORD45.3-201ENST00000363836 72 ntBASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 SNORA27-201ENST00000384323 126 ntBASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 RNU6-381P-201ENST00000391259 108 ntBASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 SNRPGP8-201ENST00000454064 226 ntBASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 RNU6-958P-201ENST00000516995 106 ntBASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.76-201ENST00000362931 109 ntBASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 RNY1-201ENST00000364228 113 ntBASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.292-201ENST00000364904 97 ntBASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 RNU6-938P-201ENST00000411285 103 ntBASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 SNORD36C-201ENST00000516733 66 ntBASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 AP000753.3-201ENST00000604083 169 ntBASIC0.85□□□□□ -2.27
RAB40ALP0C0E4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 Y_RNA.562-201ENST00000384695 113 ntBASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 SNORA79-201ENST00000408376 140 ntBASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 AF228730.3-201ENST00000436691 102 ntBASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 RPS29P24-201ENST00000486345 171 ntBASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 RNU7-53P-201ENST00000516705 60 ntBASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 AC097639.2-201ENST00000603159 172 ntBASIC0.84□□□□□ -2.27
RAB40ALP0C0E4 SNORD27-201ENST00000363981 72 ntBASIC0.83□□□□□ -2.28
RAB40ALP0C0E4 RNU6-728P-201ENST00000365375 104 ntBASIC0.83□□□□□ -2.28
RAB40ALP0C0E4 MIR568-201ENST00000385036 95 ntBASIC0.83□□□□□ -2.28
RAB40ALP0C0E4 MT-TN-201ENST00000387400 73 ntBASIC0.83□□□□□ -2.28
RAB40ALP0C0E4 SNORD89-201ENST00000390981 114 ntBASIC0.83□□□□□ -2.28
RAB40ALP0C0E4 AL118496.2-201ENST00000448300 230 ntBASIC0.83□□□□□ -2.28
RAB40ALP0C0E4 RNU6-197P-201ENST00000516680 100 ntBASIC0.83□□□□□ -2.28
RAB40ALP0C0E4 MIR6515-201ENST00000619843 57 ntBASIC0.83□□□□□ -2.28
RAB40ALP0C0E4 MIR377-201ENST00000362145 69 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 RNU6-103P-201ENST00000363686 107 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.410-201ENST00000383992 113 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 RNU6-125P-201ENST00000384505 107 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 RNU6-205P-201ENST00000390858 107 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 RNU7-73P-201ENST00000458743 63 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 U7.7-201ENST00000459276 60 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 MIR5000-201ENST00000577717 103 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 MIR4264-201ENST00000583520 66 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 AC011921.3-201ENST00000605540 361 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 AL136317.1-201ENST00000612653 226 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 7SK.10-201ENST00000621414 298 ntBASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.308-201ENST00000365043 101 ntBASIC0.81□□□□□ -2.28
RAB40ALP0C0E4 RNU6-1189P-201ENST00000383958 107 ntBASIC0.81□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.477-201ENST00000384352 108 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms