Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.94□□□□□ -2.56
APOEP02649 AC109327.2-201ENST00000448339 378 ntBASIC-0.94□□□□□ -2.56
APOEP02649 RNU6-998P-201ENST00000515894 101 ntBASIC-0.94□□□□□ -2.56
APOEP02649 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.94□□□□□ -2.56
APOEP02649 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.94□□□□□ -2.56
APOEP02649 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.94□□□□□ -2.56
APOEP02649 AP003072.1-201ENST00000531740 145 ntBASIC-0.94□□□□□ -2.56
APOEP02649 AC145350.1-201ENST00000567426 208 ntBASIC-0.94□□□□□ -2.56
APOEP02649 AC141846.1-201ENST00000568348 142 ntBASIC-0.94□□□□□ -2.56
APOEP02649 MIR3145-201ENST00000580727 82 ntBASIC-0.94□□□□□ -2.56
APOEP02649 AC108676.2-201ENST00000605225 163 ntBASIC-0.94□□□□□ -2.56
APOEP02649 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.94□□□□□ -2.56
APOEP02649 MIR1321-201ENST00000637766 79 ntBASIC-0.94□□□□□ -2.56
APOEP02649 SNORD81.1-201ENST00000363064 77 ntBASIC-0.95□□□□□ -2.56
APOEP02649 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.95□□□□□ -2.56
APOEP02649 RNU6-811P-201ENST00000384069 107 ntBASIC-0.95□□□□□ -2.56
APOEP02649 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.95□□□□□ -2.56
APOEP02649 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.95□□□□□ -2.56
APOEP02649 RNU2-66P-201ENST00000410650 161 ntBASIC-0.95□□□□□ -2.56
APOEP02649 AC244250.2-201ENST00000418731 148 ntBASIC-0.95□□□□□ -2.56
APOEP02649 RNU7-96P-201ENST00000459535 64 ntBASIC-0.95□□□□□ -2.56
APOEP02649 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.95□□□□□ -2.56
APOEP02649 RN7SL660P-201ENST00000614852 299 ntBASIC-0.95□□□□□ -2.56
APOEP02649 AC084368.1-201ENST00000620935 65 ntBASIC-0.95□□□□□ -2.56
APOEP02649 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.96□□□□□ -2.56
APOEP02649 MTND2P9-201ENST00000422293 931 ntBASIC-0.96□□□□□ -2.56
APOEP02649 AC024067.1-201ENST00000426199 223 ntBASIC-0.96□□□□□ -2.56
APOEP02649 MTND3P10-201ENST00000450967 341 ntBASIC-0.96□□□□□ -2.56
APOEP02649 RNU6-693P-201ENST00000516134 107 ntBASIC-0.96□□□□□ -2.56
APOEP02649 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.97□□□□□ -2.56
APOEP02649 MIR655-201ENST00000362159 97 ntBASIC-0.97□□□□□ -2.56
APOEP02649 MIR342-201ENST00000362212 99 ntBASIC-0.97□□□□□ -2.56
APOEP02649 RNU6-653P-201ENST00000363074 106 ntBASIC-0.97□□□□□ -2.56
APOEP02649 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.97□□□□□ -2.56
APOEP02649 SNORA1-201ENST00000384107 130 ntBASIC-0.97□□□□□ -2.56
APOEP02649 MIR548A2-201ENST00000384956 97 ntBASIC-0.97□□□□□ -2.56
APOEP02649 MIR876-201ENST00000401147 81 ntBASIC-0.97□□□□□ -2.56
APOEP02649 RNU6-373P-201ENST00000411247 98 ntBASIC-0.97□□□□□ -2.56
APOEP02649 AC023449.1-201ENST00000454464 154 ntBASIC-0.97□□□□□ -2.56
APOEP02649 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.97□□□□□ -2.56
APOEP02649 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.98□□□□□ -2.57
APOEP02649 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.98□□□□□ -2.57
APOEP02649 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.98□□□□□ -2.57
APOEP02649 RNU2-31P-201ENST00000516954 155 ntBASIC-0.98□□□□□ -2.57
APOEP02649 AC005899.2-201ENST00000584353 90 ntBASIC-0.98□□□□□ -2.57
APOEP02649 MIR3611-201ENST00000584484 83 ntBASIC-0.98□□□□□ -2.57
APOEP02649 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.98□□□□□ -2.57
APOEP02649 RNA5SP368-201ENST00000364298 116 ntBASIC-0.99□□□□□ -2.57
APOEP02649 SNORA25.7-201ENST00000364375 127 ntBASIC-0.99□□□□□ -2.57
APOEP02649 RNU6-593P-201ENST00000364716 112 ntBASIC-0.99□□□□□ -2.57
APOEP02649 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.99□□□□□ -2.57
APOEP02649 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.99□□□□□ -2.57
APOEP02649 RNA5SP25-201ENST00000410815 110 ntBASIC-0.99□□□□□ -2.57
APOEP02649 RPS3AP52-201ENST00000435639 297 ntBASIC-0.99□□□□□ -2.57
APOEP02649 RNU6-120P-201ENST00000516077 103 ntBASIC-0.99□□□□□ -2.57
APOEP02649 MIR6507-201ENST00000613630 70 ntBASIC-0.99□□□□□ -2.57
APOEP02649 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.99□□□□□ -2.57
APOEP02649 Y_RNA.125-201ENST00000363371 111 ntBASIC-1□□□□□ -2.57
APOEP02649 SNORD95.1-201ENST00000364099 68 ntBASIC-1□□□□□ -2.57
APOEP02649 RNA5SP205-201ENST00000364653 136 ntBASIC-1□□□□□ -2.57
APOEP02649 RNU6-949P-201ENST00000384040 107 ntBASIC-1□□□□□ -2.57
APOEP02649 SNORA72.4-201ENST00000384174 132 ntBASIC-1□□□□□ -2.57
APOEP02649 Y_RNA.486-201ENST00000384398 107 ntBASIC-1□□□□□ -2.57
APOEP02649 RNU7-169P-201ENST00000459456 61 ntBASIC-1□□□□□ -2.57
APOEP02649 RNU7-161P-201ENST00000517289 62 ntBASIC-1□□□□□ -2.57
APOEP02649 NAMPTP3-201ENST00000569273 224 ntBASIC-1□□□□□ -2.57
APOEP02649 AL049861.1-201ENST00000603130 150 ntBASIC-1□□□□□ -2.57
APOEP02649 AL590491.3-201ENST00000610731 82 ntBASIC-1□□□□□ -2.57
APOEP02649 Z99129.1-201ENST00000612510 255 ntBASIC-1□□□□□ -2.57
APOEP02649 AC073869.9-201ENST00000641610 120 ntBASIC-1□□□□□ -2.57
APOEP02649 RNU6-801P-201ENST00000364087 105 ntBASIC-1.01□□□□□ -2.57
APOEP02649 RNY3P11-201ENST00000364153 102 ntBASIC-1.01□□□□□ -2.57
APOEP02649 MIR548F5-201ENST00000408421 86 ntBASIC-1.01□□□□□ -2.57
APOEP02649 RNU7-104P-201ENST00000459398 79 ntBASIC-1.01□□□□□ -2.57
APOEP02649 MIR4436A-201ENST00000585278 85 ntBASIC-1.01□□□□□ -2.57
APOEP02649 AC105081.1-201ENST00000617727 106 ntBASIC-1.01□□□□□ -2.57
APOEP02649 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.01□□□□□ -2.57
APOEP02649 TPTEP1-208ENST00000636884 213 ntBASIC-1.01□□□□□ -2.57
APOEP02649 SNORD61-201ENST00000384252 73 ntBASIC-1.02□□□□□ -2.57
APOEP02649 MIR224-201ENST00000384889 81 ntBASIC-1.02□□□□□ -2.57
APOEP02649 RNU6-735P-201ENST00000410612 107 ntBASIC-1.02□□□□□ -2.57
APOEP02649 RNU6-531P-201ENST00000516694 104 ntBASIC-1.02□□□□□ -2.57
APOEP02649 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.02□□□□□ -2.57
APOEP02649 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.02□□□□□ -2.57
APOEP02649 MIR4423-201ENST00000580922 80 ntBASIC-1.02□□□□□ -2.57
APOEP02649 RN7SKP299-201ENST00000606679 301 ntBASIC-1.02□□□□□ -2.57
APOEP02649 AL021707.8-201ENST00000609428 183 ntBASIC-1.02□□□□□ -2.57
APOEP02649 MIR6086-201ENST00000638065 55 ntBASIC-1.02□□□□□ -2.57
APOEP02649 MIR101-2-201ENST00000362195 79 ntBASIC-1.03□□□□□ -2.57
APOEP02649 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.03□□□□□ -2.57
APOEP02649 SNORD110-201ENST00000408189 75 ntBASIC-1.03□□□□□ -2.57
APOEP02649 MIR548K-201ENST00000408406 116 ntBASIC-1.03□□□□□ -2.57
APOEP02649 MTATP6P17-201ENST00000431030 672 ntBASIC-1.03□□□□□ -2.57
APOEP02649 DEFB131E-201ENST00000532329 154 ntBASIC-1.03□□□□□ -2.57
APOEP02649 PISRT1.1-201ENST00000616930 107 ntBASIC-1.03□□□□□ -2.57
APOEP02649 MIR302B-201ENST00000362188 73 ntBASIC-1.04□□□□□ -2.58
APOEP02649 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.04□□□□□ -2.58
APOEP02649 RNU6-702P-201ENST00000364982 107 ntBASIC-1.04□□□□□ -2.58
APOEP02649 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.04□□□□□ -2.58
APOEP02649 RNU6-308P-201ENST00000390957 107 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms