Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-504P-201ENST00000516568 104 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 RNU1-142P-201ENST00000516682 145 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 RNU6-1149P-201ENST00000516810 97 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 RNU7-128P-201ENST00000517247 62 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 uc_338.28-201ENST00000612082 187 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 AC006435.5-201ENST00000624486 112 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.47□□□□□ -2.17
COL2A1P02458 MIR6079-201ENST00000635807 62 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 MIR338-201ENST00000636369 67 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.47□□□□□ -2.17
COL2A1P02458 snoU2-30.2-201ENST00000362805 70 ntBASIC1.46□□□□□ -2.18
COL2A1P02458 RNU1-96P-201ENST00000364163 162 ntBASIC1.46□□□□□ -2.18
COL2A1P02458 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.46□□□□□ -2.18
COL2A1P02458 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.46□□□□□ -2.18
COL2A1P02458 RNU6-240P-201ENST00000516098 97 ntBASIC1.46□□□□□ -2.18
COL2A1P02458 RNU7-99P-201ENST00000516271 62 ntBASIC1.46□□□□□ -2.18
COL2A1P02458 AC018630.3-201ENST00000542637 96 ntBASIC1.46□□□□□ -2.18
COL2A1P02458 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.46□□□□□ -2.18
COL2A1P02458 AC008133.2-201ENST00000624540 351 ntBASIC1.46□□□□□ -2.18
COL2A1P02458 SNORA63.5-201ENST00000363548 123 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 RNU6-647P-201ENST00000364243 107 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 MIR561-201ENST00000385216 97 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 MIR891A-201ENST00000401237 79 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 SNORD23.1-201ENST00000408212 104 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 RNU6-856P-201ENST00000516959 98 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 AC019176.1-201ENST00000518519 225 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 MIR5582-201ENST00000579697 68 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 U6.95-201ENST00000636931 70 ntBASIC1.45□□□□□ -2.18
COL2A1P02458 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.45□□□□□ -2.18
COL2A1P02458 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL2A1P02458 Y_RNA.43-201ENST00000362670 111 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 SNORA3A-201ENST00000364113 130 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 RNU1-133P-201ENST00000364867 167 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 RNU6-1138P-201ENST00000365359 106 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 SNORA25B-201ENST00000365507 128 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 MIR548A2-201ENST00000384956 97 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 RNA5SP109-201ENST00000391010 116 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 RNU2-63P-201ENST00000410792 194 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 HMGN2P32-201ENST00000444648 269 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.44□□□□□ -2.18
COL2A1P02458 MIR5000-201ENST00000577717 103 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 AL359075.3-201ENST00000613288 217 ntBASIC1.44□□□□□ -2.18
COL2A1P02458 Y_RNA.495-201ENST00000384435 112 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 MIR522-201ENST00000385071 87 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 MIR624-201ENST00000385217 97 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 MT-TI-201ENST00000387365 69 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 MIR802-201ENST00000390235 94 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 CALM2P4-201ENST00000430810 426 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 MICF-203ENST00000432679 129 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 CYP2C59P-201ENST00000457790 269 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AC008507.4-201ENST00000585464 127 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AL137067.1-201ENST00000615933 120 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AC022513.1-201ENST00000624512 117 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 MIR7157-201ENST00000635801 60 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AC018630.2-201ENST00000534866 2403 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL2A1P02458 RNA5SP493-201ENST00000364115 91 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 Y_RNA.346-201ENST00000365385 112 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 SNORA2.2-201ENST00000365473 135 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 SNORA51.10-201ENST00000384418 136 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 MIR518F-201ENST00000384973 87 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 MIR520G-201ENST00000385064 90 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 SNORA26-201ENST00000391286 122 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AL356379.1-201ENST00000414105 126 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 SNX2P2-201ENST00000424553 323 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AC099677.2-201ENST00000436385 175 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 RNA5SP236-201ENST00000516169 116 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 RNU6-1146P-201ENST00000516282 102 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 RNU2-34P-201ENST00000516534 121 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 RNU7-25P-201ENST00000516544 62 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 SNORD36C-201ENST00000516733 66 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 MIR514B-201ENST00000516774 80 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 RNU6-537P-201ENST00000517277 103 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AC007012.1-201ENST00000567192 175 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 AC097639.2-201ENST00000603159 172 ntBASIC1.43□□□□□ -2.18
COL2A1P02458 RNU6-755P-201ENST00000364400 103 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 RNU6-106P-201ENST00000384405 107 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 RNU6-1104P-201ENST00000384723 104 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 MIR95-201ENST00000385072 81 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 MIR548O-201ENST00000408583 114 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 RNU6-554P-201ENST00000410466 106 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.42□□□□□ -2.18
COL2A1P02458 SCARNA15-202ENST00000516881 127 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 CYCSP26-201ENST00000534107 320 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 AL365205.2-201ENST00000594586 68 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 SNORD14A-201ENST00000606526 91 ntBASIC1.42□□□□□ -2.18
COL2A1P02458 AL596211.1-201ENST00000569873 2277 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
COL2A1P02458 RNU6-268P-201ENST00000364174 107 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 Y_RNA.265-201ENST00000364677 108 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 RNU4-16P-201ENST00000364737 141 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 RNU6-1107P-201ENST00000364817 104 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 Y_RNA.494-201ENST00000384432 111 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 Y_RNA.547-201ENST00000384654 119 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 MIR17-201ENST00000385012 84 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
COL2A1P02458 AL031737.1-201ENST00000450125 223 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms