Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LDLRP01130 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LDLRP01130 MIR424-201ENST00000362227 98 ntBASIC1.54□□□□□ -2.16
LDLRP01130 Y_RNA.191-201ENST00000363972 113 ntBASIC1.54□□□□□ -2.16
LDLRP01130 MIR624-201ENST00000385217 97 ntBASIC1.54□□□□□ -2.16
LDLRP01130 AL603914.1-201ENST00000401964 204 ntBASIC1.54□□□□□ -2.16
LDLRP01130 Y_RNA.617-201ENST00000410920 90 ntBASIC1.54□□□□□ -2.16
LDLRP01130 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.54□□□□□ -2.16
LDLRP01130 AC023449.1-201ENST00000454464 154 ntBASIC1.54□□□□□ -2.16
LDLRP01130 Y_RNA.651-201ENST00000459380 103 ntBASIC1.54□□□□□ -2.16
LDLRP01130 AL049830.1-201ENST00000468034 425 ntBASIC1.54□□□□□ -2.16
LDLRP01130 RNU6-772P-201ENST00000516042 105 ntBASIC1.54□□□□□ -2.16
LDLRP01130 Y_RNA.666-201ENST00000516187 112 ntBASIC1.54□□□□□ -2.16
LDLRP01130 Y_RNA.692-201ENST00000516627 105 ntBASIC1.54□□□□□ -2.16
LDLRP01130 RNU6-365P-201ENST00000517113 106 ntBASIC1.54□□□□□ -2.16
LDLRP01130 AP002004.2-201ENST00000531656 154 ntBASIC1.54□□□□□ -2.16
LDLRP01130 AC021506.2-201ENST00000612354 169 ntBASIC1.54□□□□□ -2.16
LDLRP01130 JPX_2.1-201ENST00000614161 69 ntBASIC1.54□□□□□ -2.16
LDLRP01130 MIR376A2-201ENST00000636782 80 ntBASIC1.54□□□□□ -2.16
LDLRP01130 MIR522-201ENST00000385071 87 ntBASIC1.53□□□□□ -2.16
LDLRP01130 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LDLRP01130 RNY4P18-201ENST00000391107 89 ntBASIC1.53□□□□□ -2.16
LDLRP01130 AL034345.1-201ENST00000407768 123 ntBASIC1.53□□□□□ -2.16
LDLRP01130 RNU6-1064P-201ENST00000410626 104 ntBASIC1.53□□□□□ -2.16
LDLRP01130 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.53□□□□□ -2.16
LDLRP01130 AC099513.1-201ENST00000490423 301 ntBASIC1.53□□□□□ -2.16
LDLRP01130 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.53□□□□□ -2.16
LDLRP01130 RNA5SP236-201ENST00000516169 116 ntBASIC1.53□□□□□ -2.16
LDLRP01130 Y_RNA.690-201ENST00000516603 95 ntBASIC1.53□□□□□ -2.16
LDLRP01130 IGKV1-22-201ENST00000524313 326 ntBASIC1.53□□□□□ -2.16
LDLRP01130 AL358944.1-201ENST00000528537 144 ntBASIC1.53□□□□□ -2.16
LDLRP01130 MIR4662B-201ENST00000579498 81 ntBASIC1.53□□□□□ -2.16
LDLRP01130 MIR3129-201ENST00000581095 76 ntBASIC1.53□□□□□ -2.16
LDLRP01130 MIR6129-201ENST00000616087 109 ntBASIC1.53□□□□□ -2.16
LDLRP01130 RNU6-888P-201ENST00000363010 101 ntBASIC1.52□□□□□ -2.17
LDLRP01130 RNU6-153P-201ENST00000364422 104 ntBASIC1.52□□□□□ -2.17
LDLRP01130 RNU6-1056P-201ENST00000383996 107 ntBASIC1.52□□□□□ -2.17
LDLRP01130 RNU6-42P-201ENST00000384165 107 ntBASIC1.52□□□□□ -2.17
LDLRP01130 RNU6-1144P-201ENST00000384247 104 ntBASIC1.52□□□□□ -2.17
LDLRP01130 RNA5SP127-201ENST00000411051 133 ntBASIC1.52□□□□□ -2.17
LDLRP01130 SNRPGP14-201ENST00000435400 219 ntBASIC1.52□□□□□ -2.17
LDLRP01130 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.52□□□□□ -2.17
LDLRP01130 RN7SKP179-201ENST00000516126 217 ntBASIC1.52□□□□□ -2.17
LDLRP01130 RNU6-781P-201ENST00000516377 101 ntBASIC1.52□□□□□ -2.17
LDLRP01130 RNU6-504P-201ENST00000516568 104 ntBASIC1.52□□□□□ -2.17
LDLRP01130 SNORA77B-201ENST00000578179 125 ntBASIC1.52□□□□□ -2.17
LDLRP01130 Y_RNA.757-201ENST00000578934 114 ntBASIC1.52□□□□□ -2.17
LDLRP01130 MIR4452-201ENST00000583004 71 ntBASIC1.52□□□□□ -2.17
LDLRP01130 MIR8063-201ENST00000621930 81 ntBASIC1.52□□□□□ -2.17
LDLRP01130 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
LDLRP01130 SNORD58C-201ENST00000365223 64 ntBASIC1.51□□□□□ -2.17
LDLRP01130 SNORD24-201ENST00000383884 75 ntBASIC1.51□□□□□ -2.17
LDLRP01130 RNU6-476P-201ENST00000384726 107 ntBASIC1.51□□□□□ -2.17
LDLRP01130 MIR518F-201ENST00000384973 87 ntBASIC1.51□□□□□ -2.17
LDLRP01130 MIRLET7F2-201ENST00000385277 83 ntBASIC1.51□□□□□ -2.17
LDLRP01130 SNORD77.3-201ENST00000391113 65 ntBASIC1.51□□□□□ -2.17
LDLRP01130 SNORA26-201ENST00000391286 122 ntBASIC1.51□□□□□ -2.17
LDLRP01130 HSPE1P24-201ENST00000450782 238 ntBASIC1.51□□□□□ -2.17
LDLRP01130 snoU13.9-201ENST00000458927 103 ntBASIC1.51□□□□□ -2.17
LDLRP01130 SNORA18.4-201ENST00000516440 124 ntBASIC1.51□□□□□ -2.17
LDLRP01130 RNA5SP480-201ENST00000516840 109 ntBASIC1.51□□□□□ -2.17
LDLRP01130 SCARNA15-202ENST00000516881 127 ntBASIC1.51□□□□□ -2.17
LDLRP01130 RNU6-1270P-201ENST00000517128 108 ntBASIC1.51□□□□□ -2.17
LDLRP01130 MIR4762-201ENST00000585261 75 ntBASIC1.51□□□□□ -2.17
LDLRP01130 AC108081.1-201ENST00000604358 221 ntBASIC1.51□□□□□ -2.17
LDLRP01130 SNORA28-201ENST00000606769 126 ntBASIC1.51□□□□□ -2.17
LDLRP01130 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
LDLRP01130 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
LDLRP01130 SNORA63.4-201ENST00000362763 126 ntBASIC1.5□□□□□ -2.17
LDLRP01130 SNORD68-201ENST00000363214 84 ntBASIC1.5□□□□□ -2.17
LDLRP01130 RNU6-1292P-201ENST00000383856 107 ntBASIC1.5□□□□□ -2.17
LDLRP01130 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.5□□□□□ -2.17
LDLRP01130 AF228730.3-201ENST00000436691 102 ntBASIC1.5□□□□□ -2.17
LDLRP01130 SNORD33.1-201ENST00000516213 88 ntBASIC1.5□□□□□ -2.17
LDLRP01130 RNU6-589P-201ENST00000516485 107 ntBASIC1.5□□□□□ -2.17
LDLRP01130 RNU6-126P-201ENST00000516685 103 ntBASIC1.5□□□□□ -2.17
LDLRP01130 SUMO2P16-201ENST00000519475 264 ntBASIC1.5□□□□□ -2.17
LDLRP01130 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
LDLRP01130 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
LDLRP01130 AL022345.2-201ENST00000606307 135 ntBASIC1.5□□□□□ -2.17
LDLRP01130 RMST_2.1-201ENST00000617263 136 ntBASIC1.5□□□□□ -2.17
LDLRP01130 ICE2P2-201ENST00000483823 2787 ntBASIC1.5□□□□□ -2.17
LDLRP01130 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.49□□□□□ -2.17
LDLRP01130 U8.5-201ENST00000364528 136 ntBASIC1.49□□□□□ -2.17
LDLRP01130 MIR194-1-201ENST00000384892 85 ntBASIC1.49□□□□□ -2.17
LDLRP01130 CALM2P4-201ENST00000430810 426 ntBASIC1.49□□□□□ -2.17
LDLRP01130 PGBD4P5-201ENST00000445958 426 ntBASIC1.49□□□□□ -2.17
LDLRP01130 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
LDLRP01130 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
LDLRP01130 PDCD5P2-201ENST00000507570 312 ntBASIC1.49□□□□□ -2.17
LDLRP01130 RNU6-693P-201ENST00000516134 107 ntBASIC1.49□□□□□ -2.17
LDLRP01130 RNU7-28P-201ENST00000516759 62 ntBASIC1.49□□□□□ -2.17
LDLRP01130 Y_RNA.709-201ENST00000516952 92 ntBASIC1.49□□□□□ -2.17
LDLRP01130 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LDLRP01130 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
LDLRP01130 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
LDLRP01130 SNORD18B-201ENST00000365659 72 ntBASIC1.48□□□□□ -2.17
LDLRP01130 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
LDLRP01130 RNA5SP482-201ENST00000391269 118 ntBASIC1.48□□□□□ -2.17
LDLRP01130 U8.16-201ENST00000391279 133 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 275.9 ms