| ATE1 | O95260 | Z98742.3-201 | ENST00000418637 | 326 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU7-45P-201 | ENST00000459460 | 63 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC010210.1-203 | ENST00000513905 | 260 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6-917P-201 | ENST00000516294 | 104 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | IGKV3-31-201 | ENST00000523109 | 329 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | DNAJC19P9-201 | ENST00000555084 | 351 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIR5694-201 | ENST00000581190 | 76 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | SLC8A1-AS1-230 | ENST00000627538 | 212 nt | TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC095038.3-201 | ENST00000634439 | 195 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AP000553.5-201 | ENST00000641933 | 54 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC092881.1-201 | ENST00000638218 | 2733 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | ZNF470-202 | ENST00000391709 | 6601 nt | APPRIS P1 TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIR194-1-201 | ENST00000384892 | 85 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNA5SP425-201 | ENST00000410336 | 112 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU2-35P-201 | ENST00000516446 | 142 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC009831.4-201 | ENST00000620744 | 325 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6-661P-201 | ENST00000362409 | 107 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | SNORD12C-201 | ENST00000386307 | 89 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | TRAJ39-201 | ENST00000390498 | 63 nt | APPRIS P1 BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6-1319P-201 | ENST00000390855 | 104 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6-747P-201 | ENST00000390928 | 104 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6-241P-201 | ENST00000391148 | 104 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNA5SP144-201 | ENST00000410846 | 116 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6-177P-201 | ENST00000411257 | 104 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | snoU13.23-201 | ENST00000458863 | 104 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC104435.1-201 | ENST00000483483 | 166 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC108752.1-201 | ENST00000484679 | 576 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU2-13P-201 | ENST00000515909 | 113 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNA5SP320-201 | ENST00000516263 | 124 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIR4764-201 | ENST00000580680 | 88 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIR3163-201 | ENST00000581592 | 73 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIER3-202 | ENST00000381199 | 5188 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| ATE1 | O95260 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AL589743.1-201 | ENST00000551932 | 2712 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ATE1 | O95260 | STX7-202 | ENST00000367941 | 15791 nt | APPRIS P1 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| ATE1 | O95260 | ENAM-201 | ENST00000396073 | 5679 nt | APPRIS P1 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| ATE1 | O95260 | SNORA24-201 | ENST00000384096 | 131 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNU7-73P-201 | ENST00000458743 | 63 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR4713-201 | ENST00000582691 | 75 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR8074-201 | ENST00000615081 | 81 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ATE1 | O95260 | U4.3-201 | ENST00000621047 | 82 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ATE1 | O95260 | SNORA63.5-201 | ENST00000363548 | 123 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR27B-201 | ENST00000385129 | 97 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNU7-113P-201 | ENST00000459273 | 62 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | snoU13.16-201 | ENST00000459350 | 104 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | IGHVII-40-1-201 | ENST00000517316 | 58 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AC022523.2-201 | ENST00000561045 | 150 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AC025887.1-201 | ENST00000578349 | 264 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR4648-201 | ENST00000580107 | 72 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | HOTAIRM1_4.1-201 | ENST00000617934 | 102 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AC008133.2-201 | ENST00000624540 | 351 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | USP53-202 | ENST00000450251 | 6072 nt | APPRIS P1 TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIRLET7G-201 | ENST00000362280 | 84 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNU6-755P-201 | ENST00000364400 | 103 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | Y_RNA.281-201 | ENST00000364774 | 94 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNU6-1104P-201 | ENST00000384723 | 104 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RN7SKP223-201 | ENST00000410582 | 62 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | SNORA31.4-201 | ENST00000516049 | 129 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNU7-6P-201 | ENST00000516845 | 62 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AC004812.1-201 | ENST00000540773 | 146 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR4299-201 | ENST00000577899 | 72 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATE1 | O95260 | SNORA22.1-201 | ENST00000362701 | 134 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | Y_RNA.49-201 | ENST00000362714 | 112 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNU6-1107P-201 | ENST00000364817 | 104 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | Y_RNA.531-201 | ENST00000384589 | 121 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR17-201 | ENST00000385012 | 84 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR653-201 | ENST00000385279 | 96 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AL512326.2-201 | ENST00000426359 | 151 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AC103810.6-201 | ENST00000606708 | 136 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR6717-201 | ENST00000622747 | 73 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | PCDH11Y-203 | ENST00000362095 | 4220 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| ATE1 | O95260 | SNORD114-30-201 | ENST00000364448 | 72 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATE1 | O95260 | SNORA1.1-201 | ENST00000364671 | 133 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATE1 | O95260 | Y_RNA.549-201 | ENST00000384657 | 102 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNU6-913P-201 | ENST00000390913 | 95 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AL161935.2-201 | ENST00000414627 | 60 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATE1 | O95260 | ATP6V0E1P3-201 | ENST00000420036 | 246 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AC022254.1-201 | ENST00000567857 | 235 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR4679-2-201 | ENST00000578358 | 77 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATE1 | O95260 | THOC2-216 | ENST00000491737 | 4452 nt | TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| ATE1 | O95260 | LRRCC1-202 | ENST00000414626 | 4493 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | Y_RNA.85-201 | ENST00000363014 | 111 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | Y_RNA.116-201 | ENST00000363292 | 103 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | Y_RNA.299-201 | ENST00000364973 | 94 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | Y_RNA.362-201 | ENST00000365518 | 110 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNA5SP338-201 | ENST00000410495 | 85 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RPS3AP1-201 | ENST00000413190 | 320 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | POLR2J4-204 | ENST00000418424 | 324 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | HMGN2P38-201 | ENST00000423806 | 265 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AL356320.1-201 | ENST00000429616 | 163 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | RNU6-922P-201 | ENST00000516753 | 99 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | AL020996.3-201 | ENST00000606617 | 222 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MIR8063-201 | ENST00000621930 | 81 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | WWP1P1-201 | ENST00000466609 | 2769 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATE1 | O95260 | MT-TI-201 | ENST00000387365 | 69 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATE1 | O95260 | MIR1289-2-201 | ENST00000408360 | 111 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATE1 | O95260 | RNU6-1190P-201 | ENST00000410811 | 104 nt | BASIC | 2.15 | □□□□□ -2.07 | | |