Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 SNORD115-13-201ENST00000363358 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-41-201ENST00000363608 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-11-201ENST00000363616 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-5-201ENST00000363633 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-39-201ENST00000363694 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-4-201ENST00000363810 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-16-201ENST00000363887 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-6-201ENST00000363942 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 RNU6-457P-201ENST00000363999 107 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-42-201ENST00000364273 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-15-201ENST00000364809 81 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-1-201ENST00000364961 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-26-201ENST00000365067 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-10-201ENST00000365073 81 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 Y_RNA.351-201ENST00000365436 96 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-43-201ENST00000365503 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-36-201ENST00000365629 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORA27-201ENST00000384323 126 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 RNU7-107P-201ENST00000459121 61 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 RNU7-80P-201ENST00000459562 61 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 RNU6-659P-201ENST00000516454 104 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SUMO2P16-201ENST00000519475 264 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 AC090821.2-201ENST00000523552 176 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 FAM106DP-201ENST00000586416 501 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 SNORD115-40-201ENST00000606510 82 ntBASIC1.97□□□□□ -2.09
OPHN1O60890 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
OPHN1O60890 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
OPHN1O60890 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
OPHN1O60890 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
OPHN1O60890 RNA5SP205-201ENST00000364653 136 ntBASIC1.96□□□□□ -2.1
OPHN1O60890 RNU1-133P-201ENST00000364867 167 ntBASIC1.96□□□□□ -2.1
OPHN1O60890 RNU6-113P-201ENST00000516653 101 ntBASIC1.96□□□□□ -2.1
OPHN1O60890 AL359881.1-201ENST00000602916 267 ntBASIC1.96□□□□□ -2.1
OPHN1O60890 AC106754.2-201ENST00000623006 233 ntBASIC1.96□□□□□ -2.1
OPHN1O60890 AC095038.3-201ENST00000634439 195 ntBASIC1.96□□□□□ -2.1
OPHN1O60890 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.96□□□□□ -2.1
OPHN1O60890 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
OPHN1O60890 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.95□□□□□ -2.1
OPHN1O60890 Y_RNA.454-201ENST00000384224 113 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 AL161935.2-201ENST00000414627 60 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 SNORD123-201ENST00000459473 70 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 AC107297.1-201ENST00000459991 176 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 RPS26P48-201ENST00000491713 339 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 RNU6-772P-201ENST00000516042 105 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.95□□□□□ -2.1
OPHN1O60890 AC133485.4-201ENST00000561835 220 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 AC138907.4-201ENST00000570107 226 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.95□□□□□ -2.1
OPHN1O60890 Y_RNA.370-201ENST00000365589 108 ntBASIC1.94□□□□□ -2.1
OPHN1O60890 MIR513A1-201ENST00000385138 129 ntBASIC1.94□□□□□ -2.1
OPHN1O60890 SNX2P2-201ENST00000424553 323 ntBASIC1.94□□□□□ -2.1
OPHN1O60890 RNU6-1061P-201ENST00000516530 99 ntBASIC1.94□□□□□ -2.1
OPHN1O60890 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
OPHN1O60890 AC091932.4-201ENST00000623386 200 ntBASIC1.94□□□□□ -2.1
OPHN1O60890 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
OPHN1O60890 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
OPHN1O60890 MIR342-201ENST00000362212 99 ntBASIC1.93□□□□□ -2.1
OPHN1O60890 RNA5SP259-201ENST00000365541 109 ntBASIC1.93□□□□□ -2.1
OPHN1O60890 Y_RNA.525-201ENST00000384570 113 ntBASIC1.93□□□□□ -2.1
OPHN1O60890 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
OPHN1O60890 RNU7-96P-201ENST00000459535 64 ntBASIC1.93□□□□□ -2.1
OPHN1O60890 RPS29P24-201ENST00000486345 171 ntBASIC1.93□□□□□ -2.1
OPHN1O60890 RNU6-917P-201ENST00000516294 104 ntBASIC1.93□□□□□ -2.1
OPHN1O60890 SNORA25.15-201ENST00000516487 89 ntBASIC1.93□□□□□ -2.1
OPHN1O60890 AC108081.1-201ENST00000604358 221 ntBASIC1.93□□□□□ -2.1
OPHN1O60890 AL596211.1-201ENST00000569873 2277 ntBASIC1.93□□□□□ -2.1
OPHN1O60890 RNA5SP190-201ENST00000365222 118 ntBASIC1.92□□□□□ -2.1
OPHN1O60890 Y_RNA.494-201ENST00000384432 111 ntBASIC1.92□□□□□ -2.1
OPHN1O60890 SNORA17.3-201ENST00000391159 129 ntBASIC1.92□□□□□ -2.1
OPHN1O60890 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.92□□□□□ -2.1
OPHN1O60890 Y_RNA.712-201ENST00000517011 92 ntBASIC1.92□□□□□ -2.1
OPHN1O60890 MIR3122-201ENST00000577243 73 ntBASIC1.92□□□□□ -2.1
OPHN1O60890 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
OPHN1O60890 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
OPHN1O60890 MIR8074-201ENST00000615081 81 ntBASIC1.92□□□□□ -2.1
OPHN1O60890 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
OPHN1O60890 RNU6-1290P-201ENST00000362957 109 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 RNU6-690P-201ENST00000365242 106 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 SNORA70.7-201ENST00000384159 133 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 RNY1P6-201ENST00000384193 109 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 Y_RNA.617-201ENST00000410920 90 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 AL035398.1-201ENST00000430869 322 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 RNU6-998P-201ENST00000515894 101 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 RNU6-322P-201ENST00000516010 103 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 RNU6-240P-201ENST00000516098 97 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.91□□□□□ -2.1
OPHN1O60890 MIR548AR-201ENST00000582191 57 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
OPHN1O60890 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
OPHN1O60890 MIR302B-201ENST00000362188 73 ntBASIC1.9□□□□□ -2.11
OPHN1O60890 SNORA16.1-201ENST00000364597 132 ntBASIC1.9□□□□□ -2.11
OPHN1O60890 SNORD58C-201ENST00000365223 64 ntBASIC1.9□□□□□ -2.11
OPHN1O60890 SNORD28B-201ENST00000390993 75 ntBASIC1.9□□□□□ -2.11
OPHN1O60890 RNU6-735P-201ENST00000410612 107 ntBASIC1.9□□□□□ -2.11
OPHN1O60890 Y_RNA.629-201ENST00000411368 105 ntBASIC1.9□□□□□ -2.11
OPHN1O60890 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms