Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC245047.3-201ENST00000429428 127 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 RNU7-45P-201ENST00000459460 63 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 MIR4658-201ENST00000584344 65 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 MIR548BB-201ENST00000626714 66 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 MIR6841-201ENST00000637129 72 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM13O60858 ICE2P2-201ENST00000483823 2787 ntBASIC2.34□□□□□ -2.04
TRIM13O60858 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM13O60858 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM13O60858 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
TRIM13O60858 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM13O60858 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.33□□□□□ -2.04
TRIM13O60858 AC016717.2-201ENST00000609089 5141 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.33□□□□□ -2.04
TRIM13O60858 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.33□□□□□ -2.04
TRIM13O60858 Y_RNA.191-201ENST00000363972 113 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 RNU1-148P-201ENST00000384472 162 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 RNU6-788P-201ENST00000390967 104 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 Y_RNA.607-201ENST00000410597 98 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 AC069257.2-201ENST00000441819 155 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 AL512310.12-203ENST00000640543 90 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.33□□□□□ -2.04
TRIM13O60858 AP006437.1-201ENST00000641440 3685 ntBASIC2.33□□□□□ -2.04
TRIM13O60858 AC007336.1-201ENST00000576365 3828 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 MIRLET7C-201ENST00000362160 84 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 RNU6-862P-201ENST00000362804 105 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 RNU6-23P-201ENST00000363283 107 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 RNA5SP493-201ENST00000364115 91 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 AC108729.3-201ENST00000513484 108 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 RNU6-1116P-201ENST00000517269 99 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.32□□□□□ -2.04
TRIM13O60858 AC103810.6-201ENST00000606708 136 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 MIR376B-201ENST00000614515 100 ntBASIC2.32□□□□□ -2.04
TRIM13O60858 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRIM13O60858 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRIM13O60858 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 RNU6-633P-201ENST00000362612 103 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 SNORA22.1-201ENST00000362701 134 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 Y_RNA.94-201ENST00000363068 106 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 Y_RNA.316-201ENST00000365118 111 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 RNU6-163P-201ENST00000384396 106 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 AC090844.1-201ENST00000422019 156 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.31□□□□□ -2.04
TRIM13O60858 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM13O60858 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 RNA5SP33-201ENST00000516687 98 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 RNA5SP137-201ENST00000516833 135 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 RNU6-1006P-201ENST00000516998 103 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 SNORA70.24-201ENST00000517233 118 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 RNU7-181P-201ENST00000517234 74 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 AC027279.3-201ENST00000625055 122 ntBASIC2.31□□□□□ -2.04
TRIM13O60858 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
TRIM13O60858 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM13O60858 RNU6-424P-201ENST00000384367 105 ntBASIC2.3□□□□□ -2.04
TRIM13O60858 MIR1267-201ENST00000408723 78 ntBASIC2.3□□□□□ -2.04
TRIM13O60858 Z92545.1-201ENST00000411782 234 ntBASIC2.3□□□□□ -2.04
TRIM13O60858 STAG3L5P-204ENST00000443759 179 ntBASIC2.3□□□□□ -2.04
TRIM13O60858 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM13O60858 GTF3AP2-201ENST00000557014 266 ntBASIC2.3□□□□□ -2.04
TRIM13O60858 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
TRIM13O60858 AC103810.7-201ENST00000607821 91 ntBASIC2.3□□□□□ -2.04
TRIM13O60858 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.29□□□□□ -2.04
TRIM13O60858 SNORD115-3-201ENST00000363100 82 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 Y_RNA.247-201ENST00000364500 92 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 Y_RNA.333-201ENST00000365274 102 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 RNA5SP109-201ENST00000391010 116 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 SNORA26.6-201ENST00000391256 115 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM13O60858 AC015922.2-201ENST00000435593 184 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM13O60858 UBL5P3-201ENST00000475112 231 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 RNA5SP82-201ENST00000516707 92 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 MIR3169-201ENST00000578032 83 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 MIR3152-201ENST00000579801 74 ntBASIC2.29□□□□□ -2.04
TRIM13O60858 RNU1-58P-201ENST00000362413 163 ntBASIC2.28□□□□□ -2.04
TRIM13O60858 Y_RNA.140-201ENST00000363474 103 ntBASIC2.28□□□□□ -2.04
TRIM13O60858 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.28□□□□□ -2.04
TRIM13O60858 AL049873.1-201ENST00000480540 376 ntBASIC2.28□□□□□ -2.04
TRIM13O60858 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
TRIM13O60858 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM13O60858 AC022202.1-201ENST00000613515 211 ntBASIC2.28□□□□□ -2.04
TRIM13O60858 MIR8054-201ENST00000620877 86 ntBASIC2.28□□□□□ -2.04
TRIM13O60858 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
TRIM13O60858 AC245060.5-201ENST00000610778 3293 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
TRIM13O60858 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
TRIM13O60858 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
TRIM13O60858 RNU6-1163P-201ENST00000364516 107 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 MIR491-201ENST00000384877 84 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 MIR889-201ENST00000401280 79 ntBASIC2.27□□□□□ -2.05
TRIM13O60858 RN7SKP192-201ENST00000411291 327 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms