Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC114811.1-201ENST00000507207 168 ntBASIC1.37□□□□□ -2.19
CACNA1FO60840 RN7SKP179-201ENST00000516126 217 ntBASIC1.37□□□□□ -2.19
CACNA1FO60840 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.37□□□□□ -2.19
CACNA1FO60840 AC027279.3-201ENST00000625055 122 ntBASIC1.37□□□□□ -2.19
CACNA1FO60840 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CACNA1FO60840 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 RNU6-833P-201ENST00000363486 107 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 RNU6-81P-201ENST00000365608 104 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 SNRPGP14-201ENST00000435400 219 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 RNA5SP236-201ENST00000516169 116 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 RNU7-25P-201ENST00000516544 62 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 Y_RNA.686-201ENST00000516548 134 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 RNA5SP437-201ENST00000517249 129 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 AC022709.1-201ENST00000615967 87 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 Y_RNA.52-201ENST00000362760 96 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 Y_RNA.586-201ENST00000391146 98 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.36□□□□□ -2.19
CACNA1FO60840 MIR6129-201ENST00000616087 109 ntBASIC1.36□□□□□ -2.19
CACNA1FO60840 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.35□□□□□ -2.19
CACNA1FO60840 Y_RNA.127-201ENST00000363386 109 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 SNORD115-28-201ENST00000363931 81 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 RNA5SP205-201ENST00000364653 136 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 RNU6-424P-201ENST00000384367 105 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 MIR597-201ENST00000384968 97 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 RNU6-735P-201ENST00000410612 107 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.35□□□□□ -2.19
CACNA1FO60840 RNU6-1333P-201ENST00000516162 93 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 RNA5SP220-201ENST00000516298 104 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 AC090049.2-201ENST00000550377 109 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 AC134878.1-201ENST00000619901 243 ntBASIC1.35□□□□□ -2.19
CACNA1FO60840 SNORA63D-201ENST00000364359 132 ntBASIC1.34□□□□□ -2.19
CACNA1FO60840 SNORD61-201ENST00000384252 73 ntBASIC1.34□□□□□ -2.19
CACNA1FO60840 RNU6-950P-201ENST00000384651 107 ntBASIC1.34□□□□□ -2.19
CACNA1FO60840 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.34□□□□□ -2.19
CACNA1FO60840 SNORA31.17-201ENST00000516953 127 ntBASIC1.34□□□□□ -2.19
CACNA1FO60840 AL670379.3-201ENST00000605040 251 ntBASIC1.34□□□□□ -2.19
CACNA1FO60840 AP001340.1-201ENST00000624405 217 ntBASIC1.34□□□□□ -2.19
CACNA1FO60840 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.34□□□□□ -2.19
CACNA1FO60840 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CACNA1FO60840 SNORA1-201ENST00000384107 130 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 RNU6-163P-201ENST00000384396 106 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 AL603914.1-201ENST00000401964 204 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 RN7SKP200-201ENST00000410564 320 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 Y_RNA.630-201ENST00000411370 108 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.34□□□□□ -2.2
CACNA1FO60840 RNU1-98P-201ENST00000458992 160 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 RNU6-772P-201ENST00000516042 105 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 AC090142.3-201ENST00000519012 385 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 AC021443.1-201ENST00000604478 211 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 AC103810.8-201ENST00000607347 118 ntBASIC1.34□□□□□ -2.2
CACNA1FO60840 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
CACNA1FO60840 SNORA4.2-201ENST00000365313 147 ntBASIC1.33□□□□□ -2.2
CACNA1FO60840 RNU6-1189P-201ENST00000383958 107 ntBASIC1.33□□□□□ -2.2
CACNA1FO60840 SNORD20-201ENST00000384550 80 ntBASIC1.33□□□□□ -2.2
CACNA1FO60840 RNU6-360P-201ENST00000390944 104 ntBASIC1.33□□□□□ -2.2
CACNA1FO60840 RNA5SP109-201ENST00000391010 116 ntBASIC1.33□□□□□ -2.2
CACNA1FO60840 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
CACNA1FO60840 RNU6-1223P-201ENST00000517124 104 ntBASIC1.33□□□□□ -2.2
CACNA1FO60840 SNORA28-201ENST00000606769 126 ntBASIC1.33□□□□□ -2.2
CACNA1FO60840 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.33□□□□□ -2.2
CACNA1FO60840 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1FO60840 MIR342-201ENST00000362212 99 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 SNORA25.7-201ENST00000364375 127 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 Y_RNA.370-201ENST00000365589 108 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 Y_RNA.521-201ENST00000384560 114 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 Y_RNA.563-201ENST00000384707 108 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 MIR520A-201ENST00000384862 85 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 RNU7-34P-201ENST00000459394 64 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 RNU6-479P-201ENST00000516348 105 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 AP001328.1-201ENST00000528550 176 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 AC021506.2-201ENST00000612354 169 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 MIR8074-201ENST00000615081 81 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
CACNA1FO60840 RNU6-235P-201ENST00000362644 107 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 RNU6-915P-201ENST00000364943 103 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 RNU6-1144P-201ENST00000384247 104 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 U8.16-201ENST00000391279 133 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 Y_RNA.617-201ENST00000410920 90 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 RNU7-12P-201ENST00000516030 62 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 RNU6-1061P-201ENST00000516530 99 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 RNU7-28P-201ENST00000516759 62 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 RNU7-181P-201ENST00000517234 74 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 AC087685.1-201ENST00000587507 141 ntBASIC1.32□□□□□ -2.2
CACNA1FO60840 SNORD114-26-201ENST00000363543 72 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 Y_RNA.203-201ENST00000364106 102 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 RNU6-647P-201ENST00000364243 107 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 Y_RNA.280-201ENST00000364765 112 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 Y_RNA.351-201ENST00000365436 96 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 RNA5SP501-201ENST00000410990 112 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 RNA5SP168-201ENST00000516642 112 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 AL365222.1-201ENST00000614661 98 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 MIR6734-201ENST00000621166 68 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 ICE2P2-201ENST00000483823 2787 ntBASIC1.31□□□□□ -2.2
CACNA1FO60840 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CACNA1FO60840 SNORD14E-201ENST00000364009 85 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 Y_RNA.410-201ENST00000383992 113 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 MIR30A-201ENST00000385092 71 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms