Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MTND3P2-201ENST00000438452 342 ntBASIC0.83□□□□□ -2.28
SNX3O60493 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.83□□□□□ -2.28
SNX3O60493 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
SNX3O60493 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
SNX3O60493 AL353621.2-201ENST00000605340 133 ntBASIC0.83□□□□□ -2.28
SNX3O60493 Y_RNA.23-201ENST00000362496 106 ntBASIC0.82□□□□□ -2.28
SNX3O60493 Y_RNA.168-201ENST00000363740 102 ntBASIC0.82□□□□□ -2.28
SNX3O60493 Y_RNA.308-201ENST00000365043 101 ntBASIC0.82□□□□□ -2.28
SNX3O60493 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
SNX3O60493 RNU6-1335P-201ENST00000365426 107 ntBASIC0.82□□□□□ -2.28
SNX3O60493 SNORA1-201ENST00000384107 130 ntBASIC0.82□□□□□ -2.28
SNX3O60493 RNU6-994P-201ENST00000410507 111 ntBASIC0.82□□□□□ -2.28
SNX3O60493 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.82□□□□□ -2.28
SNX3O60493 RPS29P24-201ENST00000486345 171 ntBASIC0.82□□□□□ -2.28
SNX3O60493 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.82□□□□□ -2.28
SNX3O60493 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
SNX3O60493 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.82□□□□□ -2.28
SNX3O60493 AC062037.2-201ENST00000610137 73 ntBASIC0.82□□□□□ -2.28
SNX3O60493 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
SNX3O60493 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.81□□□□□ -2.28
SNX3O60493 Y_RNA.20-201ENST00000362479 113 ntBASIC0.81□□□□□ -2.28
SNX3O60493 RNU6-728P-201ENST00000365375 104 ntBASIC0.81□□□□□ -2.28
SNX3O60493 Y_RNA.350-201ENST00000365409 98 ntBASIC0.81□□□□□ -2.28
SNX3O60493 MT-TN-201ENST00000387400 73 ntBASIC0.81□□□□□ -2.28
SNX3O60493 RNU6-205P-201ENST00000390858 107 ntBASIC0.81□□□□□ -2.28
SNX3O60493 SNORD89-201ENST00000390981 114 ntBASIC0.81□□□□□ -2.28
SNX3O60493 AL078595.1-201ENST00000404458 226 ntBASIC0.81□□□□□ -2.28
SNX3O60493 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.81□□□□□ -2.28
SNX3O60493 AL138752.1-201ENST00000452964 351 ntBASIC0.81□□□□□ -2.28
SNX3O60493 RNU7-73P-201ENST00000458743 63 ntBASIC0.81□□□□□ -2.28
SNX3O60493 Y_RNA.680-201ENST00000516441 93 ntBASIC0.81□□□□□ -2.28
SNX3O60493 MIR3128-201ENST00000581957 66 ntBASIC0.81□□□□□ -2.28
SNX3O60493 MIR4503-201ENST00000582187 83 ntBASIC0.81□□□□□ -2.28
SNX3O60493 U4.1-201ENST00000620349 87 ntBASIC0.81□□□□□ -2.28
SNX3O60493 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SNX3O60493 RNU6-103P-201ENST00000363686 107 ntBASIC0.8□□□□□ -2.28
SNX3O60493 Y_RNA.327-201ENST00000365201 102 ntBASIC0.8□□□□□ -2.28
SNX3O60493 RNU6-1189P-201ENST00000383958 107 ntBASIC0.8□□□□□ -2.28
SNX3O60493 Y_RNA.410-201ENST00000383992 113 ntBASIC0.8□□□□□ -2.28
SNX3O60493 SNORD77.3-201ENST00000391113 65 ntBASIC0.8□□□□□ -2.28
SNX3O60493 SNORD58.1-201ENST00000391313 66 ntBASIC0.8□□□□□ -2.28
SNX3O60493 RNU6-493P-201ENST00000391321 108 ntBASIC0.8□□□□□ -2.28
SNX3O60493 AL035398.1-201ENST00000430869 322 ntBASIC0.8□□□□□ -2.28
SNX3O60493 MIR4744-201ENST00000581563 82 ntBASIC0.8□□□□□ -2.28
SNX3O60493 AP000753.3-201ENST00000604083 169 ntBASIC0.8□□□□□ -2.28
SNX3O60493 snoU13.31-201ENST00000607291 104 ntBASIC0.8□□□□□ -2.28
SNX3O60493 MIR8055-201ENST00000610739 97 ntBASIC0.8□□□□□ -2.28
SNX3O60493 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SNX3O60493 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SNX3O60493 MIR377-201ENST00000362145 69 ntBASIC0.79□□□□□ -2.28
SNX3O60493 RNU6-580P-201ENST00000365159 107 ntBASIC0.79□□□□□ -2.28
SNX3O60493 RNU6-53P-201ENST00000365367 106 ntBASIC0.79□□□□□ -2.28
SNX3O60493 Y_RNA.440-201ENST00000384120 114 ntBASIC0.79□□□□□ -2.28
SNX3O60493 RNU6-574P-201ENST00000384265 107 ntBASIC0.79□□□□□ -2.28
SNX3O60493 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
SNX3O60493 AC244023.1-201ENST00000426884 112 ntBASIC0.79□□□□□ -2.28
SNX3O60493 AC067940.1-201ENST00000458411 300 ntBASIC0.79□□□□□ -2.28
SNX3O60493 U7.7-201ENST00000459276 60 ntBASIC0.79□□□□□ -2.28
SNX3O60493 RNA5SP458-201ENST00000516188 119 ntBASIC0.79□□□□□ -2.28
SNX3O60493 RNU7-53P-201ENST00000516705 60 ntBASIC0.79□□□□□ -2.28
SNX3O60493 AC242498.1-201ENST00000604134 111 ntBASIC0.79□□□□□ -2.28
SNX3O60493 RNU2-4P-201ENST00000606190 192 ntBASIC0.79□□□□□ -2.28
SNX3O60493 7SK.10-201ENST00000621414 298 ntBASIC0.79□□□□□ -2.28
SNX3O60493 MIR376A2-201ENST00000636782 80 ntBASIC0.79□□□□□ -2.28
SNX3O60493 RNU6-923P-201ENST00000364753 107 ntBASIC0.78□□□□□ -2.28
SNX3O60493 RNU6-196P-201ENST00000384315 107 ntBASIC0.78□□□□□ -2.28
SNX3O60493 MIR532-201ENST00000385025 91 ntBASIC0.78□□□□□ -2.28
SNX3O60493 MIR605-201ENST00000385078 83 ntBASIC0.78□□□□□ -2.28
SNX3O60493 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
SNX3O60493 SNORA79-201ENST00000408376 140 ntBASIC0.78□□□□□ -2.28
SNX3O60493 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
SNX3O60493 RNU4-43P-201ENST00000410628 137 ntBASIC0.78□□□□□ -2.28
SNX3O60493 Y_RNA.626-201ENST00000411288 95 ntBASIC0.78□□□□□ -2.28
SNX3O60493 HMGN1P33-201ENST00000432945 451 ntBASIC0.78□□□□□ -2.28
SNX3O60493 AL121914.1-201ENST00000450188 156 ntBASIC0.78□□□□□ -2.28
SNX3O60493 snoU13.21-201ENST00000459368 105 ntBASIC0.78□□□□□ -2.28
SNX3O60493 RNU7-96P-201ENST00000459535 64 ntBASIC0.78□□□□□ -2.28
SNX3O60493 RNU6-998P-201ENST00000515894 101 ntBASIC0.78□□□□□ -2.28
SNX3O60493 RNU6-1110P-201ENST00000516462 101 ntBASIC0.78□□□□□ -2.28
SNX3O60493 MIR3129-201ENST00000581095 76 ntBASIC0.78□□□□□ -2.28
SNX3O60493 MIR4264-201ENST00000583520 66 ntBASIC0.78□□□□□ -2.28
SNX3O60493 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
SNX3O60493 MIR342-201ENST00000362212 99 ntBASIC0.77□□□□□ -2.29
SNX3O60493 Y_RNA.7-201ENST00000362352 102 ntBASIC0.77□□□□□ -2.29
SNX3O60493 Y_RNA.60-201ENST00000362831 98 ntBASIC0.77□□□□□ -2.29
SNX3O60493 RNU6-392P-201ENST00000364926 101 ntBASIC0.77□□□□□ -2.29
SNX3O60493 RNU6-702P-201ENST00000364982 107 ntBASIC0.77□□□□□ -2.29
SNX3O60493 Y_RNA.478-201ENST00000384358 107 ntBASIC0.77□□□□□ -2.29
SNX3O60493 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SNX3O60493 RNU6-578P-201ENST00000390980 103 ntBASIC0.77□□□□□ -2.29
SNX3O60493 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.77□□□□□ -2.29
SNX3O60493 RNU6-1190P-201ENST00000410811 104 ntBASIC0.77□□□□□ -2.29
SNX3O60493 RNU2-11P-201ENST00000459191 187 ntBASIC0.77□□□□□ -2.29
SNX3O60493 MIR4308-201ENST00000580634 81 ntBASIC0.77□□□□□ -2.29
SNX3O60493 MIR4769-201ENST00000584126 77 ntBASIC0.77□□□□□ -2.29
SNX3O60493 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
SNX3O60493 AC108706.1-201ENST00000611053 297 ntBASIC0.77□□□□□ -2.29
SNX3O60493 Z97988.1-201ENST00000637697 135 ntBASIC0.77□□□□□ -2.29
SNX3O60493 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
SNX3O60493 AC023934.1-201ENST00000574529 2389 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms