Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 SNORD33-201ENST00000362761 85 ntBASIC1.26□□□□□ -2.21
PRKNO60260 RNY1P11-201ENST00000363759 113 ntBASIC1.26□□□□□ -2.21
PRKNO60260 RNU6-1082P-201ENST00000364574 107 ntBASIC1.26□□□□□ -2.21
PRKNO60260 SNORD50.2-201ENST00000365465 70 ntBASIC1.26□□□□□ -2.21
PRKNO60260 RNU6-1336P-201ENST00000383886 109 ntBASIC1.26□□□□□ -2.21
PRKNO60260 Y_RNA.508-201ENST00000384502 114 ntBASIC1.26□□□□□ -2.21
PRKNO60260 SNORD28B-201ENST00000390993 75 ntBASIC1.26□□□□□ -2.21
PRKNO60260 SNORD37.2-201ENST00000391075 66 ntBASIC1.26□□□□□ -2.21
PRKNO60260 RNU7-197P-201ENST00000458836 62 ntBASIC1.26□□□□□ -2.21
PRKNO60260 SNORA25.12-201ENST00000516202 82 ntBASIC1.26□□□□□ -2.21
PRKNO60260 RNU6-947P-201ENST00000516264 106 ntBASIC1.26□□□□□ -2.21
PRKNO60260 RNU6-426P-201ENST00000516464 97 ntBASIC1.26□□□□□ -2.21
PRKNO60260 SNORA74.3-201ENST00000517108 154 ntBASIC1.26□□□□□ -2.21
PRKNO60260 AC112693.2-201ENST00000556538 232 ntBASIC1.26□□□□□ -2.21
PRKNO60260 MIR548X2-201ENST00000579776 100 ntBASIC1.26□□□□□ -2.21
PRKNO60260 AL365205.2-201ENST00000594586 68 ntBASIC1.26□□□□□ -2.21
PRKNO60260 AC134878.1-201ENST00000619901 243 ntBASIC1.26□□□□□ -2.21
PRKNO60260 MIR6844-201ENST00000637122 62 ntBASIC1.26□□□□□ -2.21
PRKNO60260 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
PRKNO60260 RNU6-704P-201ENST00000364162 103 ntBASIC1.25□□□□□ -2.21
PRKNO60260 SNORA25.7-201ENST00000364375 127 ntBASIC1.25□□□□□ -2.21
PRKNO60260 MIR613-201ENST00000385248 95 ntBASIC1.25□□□□□ -2.21
PRKNO60260 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.25□□□□□ -2.21
PRKNO60260 RNU6-588P-201ENST00000410281 105 ntBASIC1.25□□□□□ -2.21
PRKNO60260 RPS27P16-201ENST00000425758 201 ntBASIC1.25□□□□□ -2.21
PRKNO60260 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.25□□□□□ -2.21
PRKNO60260 RPS29P29-201ENST00000456396 171 ntBASIC1.25□□□□□ -2.21
PRKNO60260 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
PRKNO60260 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
PRKNO60260 SNORD111.1-201ENST00000516421 86 ntBASIC1.25□□□□□ -2.21
PRKNO60260 RNU6-406P-201ENST00000516470 107 ntBASIC1.25□□□□□ -2.21
PRKNO60260 SNORD36C-201ENST00000516733 66 ntBASIC1.25□□□□□ -2.21
PRKNO60260 MIR3910-1-201ENST00000580936 111 ntBASIC1.25□□□□□ -2.21
PRKNO60260 MIR548AR-201ENST00000582191 57 ntBASIC1.25□□□□□ -2.21
PRKNO60260 AL442644.1-201ENST00000454390 3105 ntBASIC1.25□□□□□ -2.21
PRKNO60260 Y_RNA.241-201ENST00000364470 117 ntBASIC1.24□□□□□ -2.21
PRKNO60260 Y_RNA.343-201ENST00000365354 112 ntBASIC1.24□□□□□ -2.21
PRKNO60260 Y_RNA.542-201ENST00000384641 111 ntBASIC1.24□□□□□ -2.21
PRKNO60260 Y_RNA.568-201ENST00000384742 113 ntBASIC1.24□□□□□ -2.21
PRKNO60260 MIR570-201ENST00000384917 97 ntBASIC1.24□□□□□ -2.21
PRKNO60260 MIR520C-201ENST00000385005 87 ntBASIC1.24□□□□□ -2.21
PRKNO60260 MIR513C-201ENST00000401352 84 ntBASIC1.24□□□□□ -2.21
PRKNO60260 RNU6-955P-201ENST00000410497 104 ntBASIC1.24□□□□□ -2.21
PRKNO60260 RNU6-938P-201ENST00000411285 103 ntBASIC1.24□□□□□ -2.21
PRKNO60260 TMSB4XP3-201ENST00000445144 114 ntBASIC1.24□□□□□ -2.21
PRKNO60260 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
PRKNO60260 RNA5SP445-201ENST00000515889 115 ntBASIC1.24□□□□□ -2.21
PRKNO60260 AP003484.1-201ENST00000530974 250 ntBASIC1.24□□□□□ -2.21
PRKNO60260 GHRLOS.1-201ENST00000610995 70 ntBASIC1.24□□□□□ -2.21
PRKNO60260 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
PRKNO60260 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
PRKNO60260 Y_RNA.251-201ENST00000364551 99 ntBASIC1.23□□□□□ -2.21
PRKNO60260 Y_RNA.370-201ENST00000365589 108 ntBASIC1.23□□□□□ -2.21
PRKNO60260 RNU6-1189P-201ENST00000383958 107 ntBASIC1.23□□□□□ -2.21
PRKNO60260 SNORD77.3-201ENST00000391113 65 ntBASIC1.23□□□□□ -2.21
PRKNO60260 RNA5SP127-201ENST00000411051 133 ntBASIC1.23□□□□□ -2.21
PRKNO60260 AC087499.4-201ENST00000448505 178 ntBASIC1.23□□□□□ -2.21
PRKNO60260 RNA5SP272-201ENST00000516095 111 ntBASIC1.23□□□□□ -2.21
PRKNO60260 SNORA18.4-201ENST00000516440 124 ntBASIC1.23□□□□□ -2.21
PRKNO60260 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
PRKNO60260 AL512310.8-201ENST00000550183 120 ntBASIC1.23□□□□□ -2.21
PRKNO60260 MIR4764-201ENST00000580680 88 ntBASIC1.23□□□□□ -2.21
PRKNO60260 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
PRKNO60260 SNORA1.2-201ENST00000365189 134 ntBASIC1.22□□□□□ -2.21
PRKNO60260 Y_RNA.355-201ENST00000365462 98 ntBASIC1.22□□□□□ -2.21
PRKNO60260 Y_RNA.420-201ENST00000384043 110 ntBASIC1.22□□□□□ -2.21
PRKNO60260 Y_RNA.494-201ENST00000384432 111 ntBASIC1.22□□□□□ -2.21
PRKNO60260 Y_RNA.497-201ENST00000384447 98 ntBASIC1.22□□□□□ -2.21
PRKNO60260 MIR624-201ENST00000385217 97 ntBASIC1.22□□□□□ -2.21
PRKNO60260 RNU6-460P-201ENST00000391158 108 ntBASIC1.22□□□□□ -2.21
PRKNO60260 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.22□□□□□ -2.21
PRKNO60260 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.22□□□□□ -2.21
PRKNO60260 RNU7-43P-201ENST00000516554 64 ntBASIC1.22□□□□□ -2.21
PRKNO60260 RNU6-902P-201ENST00000517212 91 ntBASIC1.22□□□□□ -2.21
PRKNO60260 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
PRKNO60260 MIR3664-201ENST00000579074 99 ntBASIC1.22□□□□□ -2.21
PRKNO60260 AL357312.1-201ENST00000603879 298 ntBASIC1.22□□□□□ -2.21
PRKNO60260 AP001485.1-201ENST00000604799 199 ntBASIC1.22□□□□□ -2.21
PRKNO60260 AL157834.3-201ENST00000615543 103 ntBASIC1.22□□□□□ -2.21
PRKNO60260 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
PRKNO60260 MIR376A2-201ENST00000636782 80 ntBASIC1.22□□□□□ -2.21
PRKNO60260 AC010332.2-201ENST00000613083 1904 ntBASIC1.21□□□□□ -2.22
PRKNO60260 Y_RNA.327-201ENST00000365201 102 ntBASIC1.21□□□□□ -2.22
PRKNO60260 RNU6-1292P-201ENST00000383856 107 ntBASIC1.21□□□□□ -2.22
PRKNO60260 Y_RNA.410-201ENST00000383992 113 ntBASIC1.21□□□□□ -2.22
PRKNO60260 SNORA20-201ENST00000384662 132 ntBASIC1.21□□□□□ -2.22
PRKNO60260 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.21□□□□□ -2.22
PRKNO60260 RNU6-257P-201ENST00000410238 98 ntBASIC1.21□□□□□ -2.22
PRKNO60260 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
PRKNO60260 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.21□□□□□ -2.22
PRKNO60260 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
PRKNO60260 RPL30P7-201ENST00000479312 323 ntBASIC1.21□□□□□ -2.22
PRKNO60260 RPS26P48-201ENST00000491713 339 ntBASIC1.21□□□□□ -2.22
PRKNO60260 RNU7-41P-201ENST00000515917 61 ntBASIC1.21□□□□□ -2.22
PRKNO60260 RNU6-789P-201ENST00000517105 102 ntBASIC1.21□□□□□ -2.22
PRKNO60260 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
PRKNO60260 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
PRKNO60260 AL096861.1-201ENST00000610899 123 ntBASIC1.21□□□□□ -2.22
PRKNO60260 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.21□□□□□ -2.22
PRKNO60260 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms