Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL451046.2-201ENST00000403074 277 ntBASIC1.03□□□□□ -2.24
CDX4O14627 RN7SKP88-201ENST00000516847 250 ntBASIC1.03□□□□□ -2.24
CDX4O14627 AC090821.2-201ENST00000523552 176 ntBASIC1.03□□□□□ -2.24
CDX4O14627 AC090049.2-201ENST00000550377 109 ntBASIC1.03□□□□□ -2.24
CDX4O14627 MIR3973-201ENST00000579824 107 ntBASIC1.03□□□□□ -2.24
CDX4O14627 MIR4431-201ENST00000579990 94 ntBASIC1.03□□□□□ -2.24
CDX4O14627 AL357312.1-201ENST00000603879 298 ntBASIC1.03□□□□□ -2.24
CDX4O14627 AC104465.1-201ENST00000611365 139 ntBASIC1.03□□□□□ -2.24
CDX4O14627 7SK.8-201ENST00000612110 250 ntBASIC1.03□□□□□ -2.24
CDX4O14627 7SK.11-201ENST00000615477 250 ntBASIC1.03□□□□□ -2.24
CDX4O14627 7SK.13-201ENST00000622040 250 ntBASIC1.03□□□□□ -2.24
CDX4O14627 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CDX4O14627 RNU6-643P-201ENST00000384018 107 ntBASIC1.02□□□□□ -2.25
CDX4O14627 SNORD61-201ENST00000384252 73 ntBASIC1.02□□□□□ -2.25
CDX4O14627 Y_RNA.555-201ENST00000384673 110 ntBASIC1.02□□□□□ -2.25
CDX4O14627 MIR653-201ENST00000385279 96 ntBASIC1.02□□□□□ -2.25
CDX4O14627 RNU4-43P-201ENST00000410628 137 ntBASIC1.02□□□□□ -2.25
CDX4O14627 RNU6-1135P-201ENST00000411083 103 ntBASIC1.02□□□□□ -2.25
CDX4O14627 AC015922.2-201ENST00000435593 184 ntBASIC1.02□□□□□ -2.25
CDX4O14627 RNU6-693P-201ENST00000516134 107 ntBASIC1.02□□□□□ -2.25
CDX4O14627 RNU6-917P-201ENST00000516294 104 ntBASIC1.02□□□□□ -2.25
CDX4O14627 RNA5SP153-201ENST00000516498 76 ntBASIC1.02□□□□□ -2.25
CDX4O14627 RNU7-25P-201ENST00000516544 62 ntBASIC1.02□□□□□ -2.25
CDX4O14627 RNU6-197P-201ENST00000516680 100 ntBASIC1.02□□□□□ -2.25
CDX4O14627 RNU6-365P-201ENST00000517113 106 ntBASIC1.02□□□□□ -2.25
CDX4O14627 RNU6-1270P-201ENST00000517128 108 ntBASIC1.02□□□□□ -2.25
CDX4O14627 AC090142.3-201ENST00000519012 385 ntBASIC1.02□□□□□ -2.25
CDX4O14627 CYP3A52P-201ENST00000563326 91 ntBASIC1.02□□□□□ -2.25
CDX4O14627 MIR4662B-201ENST00000579498 81 ntBASIC1.02□□□□□ -2.25
CDX4O14627 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
CDX4O14627 GHRLOS.1-201ENST00000610995 70 ntBASIC1.02□□□□□ -2.25
CDX4O14627 AC006441.5-201ENST00000612680 209 ntBASIC1.02□□□□□ -2.25
CDX4O14627 Y_RNA.8-201ENST00000362353 102 ntBASIC1.01□□□□□ -2.25
CDX4O14627 Y_RNA.66-201ENST00000362862 102 ntBASIC1.01□□□□□ -2.25
CDX4O14627 SNORA25.8-201ENST00000364831 128 ntBASIC1.01□□□□□ -2.25
CDX4O14627 Y_RNA.357-201ENST00000365487 109 ntBASIC1.01□□□□□ -2.25
CDX4O14627 RNU6-209P-201ENST00000384118 107 ntBASIC1.01□□□□□ -2.25
CDX4O14627 RNU6-804P-201ENST00000384286 107 ntBASIC1.01□□□□□ -2.25
CDX4O14627 MIR452-201ENST00000385020 85 ntBASIC1.01□□□□□ -2.25
CDX4O14627 SNORA79-201ENST00000408376 140 ntBASIC1.01□□□□□ -2.25
CDX4O14627 MIR548I3-201ENST00000408378 149 ntBASIC1.01□□□□□ -2.25
CDX4O14627 MIR548I1-201ENST00000408810 149 ntBASIC1.01□□□□□ -2.25
CDX4O14627 HMGN2P32-201ENST00000444648 269 ntBASIC1.01□□□□□ -2.25
CDX4O14627 MIR378D2-201ENST00000580636 98 ntBASIC1.01□□□□□ -2.25
CDX4O14627 AC015726.2-201ENST00000620112 122 ntBASIC1.01□□□□□ -2.25
CDX4O14627 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
CDX4O14627 RNA5SP327-201ENST00000362494 101 ntBASIC1□□□□□ -2.25
CDX4O14627 Y_RNA.30-201ENST00000362572 97 ntBASIC1□□□□□ -2.25
CDX4O14627 Y_RNA.180-201ENST00000363867 113 ntBASIC1□□□□□ -2.25
CDX4O14627 RNU4-84P-201ENST00000364200 139 ntBASIC1□□□□□ -2.25
CDX4O14627 Y_RNA.272-201ENST00000364696 102 ntBASIC1□□□□□ -2.25
CDX4O14627 RNU6-818P-201ENST00000364837 108 ntBASIC1□□□□□ -2.25
CDX4O14627 RNU6-1336P-201ENST00000383886 109 ntBASIC1□□□□□ -2.25
CDX4O14627 Y_RNA.547-201ENST00000384654 119 ntBASIC1□□□□□ -2.25
CDX4O14627 MIR548A2-201ENST00000384956 97 ntBASIC1□□□□□ -2.25
CDX4O14627 MIR548O-201ENST00000408583 114 ntBASIC1□□□□□ -2.25
CDX4O14627 RNU6-394P-201ENST00000410735 107 ntBASIC1□□□□□ -2.25
CDX4O14627 AL591704.2-201ENST00000421658 181 ntBASIC1□□□□□ -2.25
CDX4O14627 RPL39P39-201ENST00000455840 151 ntBASIC1□□□□□ -2.25
CDX4O14627 RNU6-504P-201ENST00000516568 104 ntBASIC1□□□□□ -2.25
CDX4O14627 RNU6-922P-201ENST00000516753 99 ntBASIC1□□□□□ -2.25
CDX4O14627 AC007751.1-201ENST00000529260 376 ntBASIC1□□□□□ -2.25
CDX4O14627 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
CDX4O14627 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1□□□□□ -2.25
CDX4O14627 Y_RNA.242-201ENST00000364473 110 ntBASIC0.99□□□□□ -2.25
CDX4O14627 RNU6-1130P-201ENST00000365434 107 ntBASIC0.99□□□□□ -2.25
CDX4O14627 SNORA1-201ENST00000384107 130 ntBASIC0.99□□□□□ -2.25
CDX4O14627 Y_RNA.441-201ENST00000384123 112 ntBASIC0.99□□□□□ -2.25
CDX4O14627 SNORD38C-201ENST00000384381 69 ntBASIC0.99□□□□□ -2.25
CDX4O14627 Y_RNA.521-201ENST00000384560 114 ntBASIC0.99□□□□□ -2.25
CDX4O14627 RNU6-768P-201ENST00000384683 107 ntBASIC0.99□□□□□ -2.25
CDX4O14627 MIR518F-201ENST00000384973 87 ntBASIC0.99□□□□□ -2.25
CDX4O14627 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
CDX4O14627 RNU6-239P-201ENST00000390990 99 ntBASIC0.99□□□□□ -2.25
CDX4O14627 SNORA26-201ENST00000391286 122 ntBASIC0.99□□□□□ -2.25
CDX4O14627 AC107027.2-201ENST00000512197 115 ntBASIC0.99□□□□□ -2.25
CDX4O14627 AC097639.2-201ENST00000603159 172 ntBASIC0.99□□□□□ -2.25
CDX4O14627 AC021753.1-201ENST00000635724 168 ntBASIC0.99□□□□□ -2.25
CDX4O14627 MIR3658-201ENST00000636291 56 ntBASIC0.99□□□□□ -2.25
CDX4O14627 RNU6-888P-201ENST00000363010 101 ntBASIC0.98□□□□□ -2.25
CDX4O14627 RNU6-978P-201ENST00000364371 103 ntBASIC0.98□□□□□ -2.25
CDX4O14627 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
CDX4O14627 SNORD24-201ENST00000383884 75 ntBASIC0.98□□□□□ -2.25
CDX4O14627 RNU6-939P-201ENST00000384634 107 ntBASIC0.98□□□□□ -2.25
CDX4O14627 MIR136-201ENST00000385207 82 ntBASIC0.98□□□□□ -2.25
CDX4O14627 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.98□□□□□ -2.25
CDX4O14627 AF228730.3-201ENST00000436691 102 ntBASIC0.98□□□□□ -2.25
CDX4O14627 AL133373.1-201ENST00000497098 94 ntBASIC0.98□□□□□ -2.25
CDX4O14627 RN7SKP179-201ENST00000516126 217 ntBASIC0.98□□□□□ -2.25
CDX4O14627 SNORD116-25-201ENST00000516517 92 ntBASIC0.98□□□□□ -2.25
CDX4O14627 RNU7-121P-201ENST00000516604 62 ntBASIC0.98□□□□□ -2.25
CDX4O14627 RNU6-126P-201ENST00000516685 103 ntBASIC0.98□□□□□ -2.25
CDX4O14627 SNORA18.7-201ENST00000516910 131 ntBASIC0.98□□□□□ -2.25
CDX4O14627 RNU6-255P-201ENST00000516957 105 ntBASIC0.98□□□□□ -2.25
CDX4O14627 RNU7-181P-201ENST00000517234 74 ntBASIC0.98□□□□□ -2.25
CDX4O14627 MIR3144-201ENST00000579460 79 ntBASIC0.98□□□□□ -2.25
CDX4O14627 MIR3129-201ENST00000581095 76 ntBASIC0.98□□□□□ -2.25
CDX4O14627 AL020996.3-201ENST00000606617 222 ntBASIC0.98□□□□□ -2.25
CDX4O14627 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.98□□□□□ -2.25
CDX4O14627 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms