Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 SNORD115-9-201ENST00000362912 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.76-201ENST00000362931 109 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-21-201ENST00000362963 81 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-14-201ENST00000363090 81 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-1309P-201ENST00000363305 108 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-13-201ENST00000363358 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-41-201ENST00000363608 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-11-201ENST00000363616 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-5-201ENST00000363633 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-39-201ENST00000363694 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-4-201ENST00000363810 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-16-201ENST00000363887 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-6-201ENST00000363942 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-42-201ENST00000364273 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-15-201ENST00000364809 81 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-1-201ENST00000364961 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-26-201ENST00000365067 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-10-201ENST00000365073 81 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-43-201ENST00000365503 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-36-201ENST00000365629 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 RNY3P5-201ENST00000384127 102 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR616-201ENST00000385293 97 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR942-201ENST00000401111 86 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 RNA5SP255-201ENST00000516370 107 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-126P-201ENST00000516685 103 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 AC133485.1-201ENST00000567176 124 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 AC138907.6-201ENST00000568401 126 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-40-201ENST00000606510 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.91-201ENST00000363042 107 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.149-201ENST00000363558 117 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORD113.3-201ENST00000364630 78 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.634-201ENST00000364811 113 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.562-201ENST00000384695 113 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORA40.5-201ENST00000391061 128 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-381P-201ENST00000391259 108 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 AL606845.1-201ENST00000404881 255 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORD111-201ENST00000408139 94 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 RNA5SP95-201ENST00000410319 137 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU2-38P-201ENST00000410856 79 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 POLR2J4-204ENST00000418424 324 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 AF228730.3-201ENST00000436691 102 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-327P-201ENST00000516270 127 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-1299P-201ENST00000516316 100 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORA18.4-201ENST00000516440 124 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-504P-201ENST00000516568 104 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 AC097639.2-201ENST00000603159 172 ntBASIC0.77□□□□□ -2.29
NEDD8-MDP1E9PL57 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.241-201ENST00000364470 117 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.277-201ENST00000364754 102 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU1-133P-201ENST00000364867 167 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-580P-201ENST00000365159 107 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-396P-201ENST00000365369 105 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-1228P-201ENST00000391014 107 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 MTND2P23-201ENST00000422990 651 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 AL035398.1-201ENST00000430869 322 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 MTCYBP9-201ENST00000431021 303 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 FABP5P4-201ENST00000437203 171 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.679-201ENST00000516416 91 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 RNA5SP153-201ENST00000516498 76 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 MIR2115-201ENST00000516657 100 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORD36C-201ENST00000516733 66 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 AP000942.4-201ENST00000604811 241 ntBASIC0.76□□□□□ -2.29
NEDD8-MDP1E9PL57 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORD45.3-201ENST00000363836 72 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-125P-201ENST00000384505 107 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.622-201ENST00000411091 108 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 AC090844.1-201ENST00000422019 156 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 AC244023.1-201ENST00000426884 112 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-1132P-201ENST00000459214 107 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 snoU13.16-201ENST00000459350 104 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 AC107297.1-201ENST00000459991 176 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-561P-201ENST00000516222 102 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-197P-201ENST00000516680 100 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-1270P-201ENST00000517128 108 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 AP003484.1-201ENST00000530974 250 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 AC242498.1-201ENST00000604134 111 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-94P-201ENST00000607728 107 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 MIR8055-201ENST00000610739 97 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 AL442067.1-201ENST00000613261 223 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 AC134878.1-201ENST00000619901 243 ntBASIC0.75□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.168-201ENST00000363740 102 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.292-201ENST00000364904 97 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-1335P-201ENST00000365426 107 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.432-201ENST00000384087 111 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 MT-TN-201ENST00000387400 73 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-913P-201ENST00000390913 95 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 RPS3AP1-201ENST00000413190 320 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU7-67P-201ENST00000459003 62 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 U7.7-201ENST00000459276 60 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 MTND1P19-201ENST00000511780 315 ntBASIC0.74□□□□□ -2.29
NEDD8-MDP1E9PL57 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 219.7 ms