Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RNA5SP299-201ENST00000391203 116 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 RNU6-101P-201ENST00000410323 104 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 Y_RNA.617-201ENST00000410920 90 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 AC082651.2-201ENST00000496833 166 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 MIR548S-201ENST00000581352 82 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 AL008718.3-201ENST00000610217 321 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 AC243829.6-201ENST00000612652 106 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 AC090971.5-201ENST00000621102 293 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
HMGB1P1B2RPK0 SNORA53-201ENST00000391141 249 ntBASIC0.18□□□□□ -2.38
HMGB1P1B2RPK0 RPL39P25-201ENST00000449384 154 ntBASIC0.18□□□□□ -2.38
HMGB1P1B2RPK0 RNU6-504P-201ENST00000516568 104 ntBASIC0.18□□□□□ -2.38
HMGB1P1B2RPK0 SNORA40.15-201ENST00000516884 107 ntBASIC0.18□□□□□ -2.38
HMGB1P1B2RPK0 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
HMGB1P1B2RPK0 RNU6-888P-201ENST00000363010 101 ntBASIC0.17□□□□□ -2.38
HMGB1P1B2RPK0 MIR563-201ENST00000385080 79 ntBASIC0.17□□□□□ -2.38
HMGB1P1B2RPK0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.17□□□□□ -2.38
HMGB1P1B2RPK0 RNU7-96P-201ENST00000459535 64 ntBASIC0.17□□□□□ -2.38
HMGB1P1B2RPK0 RNU6-998P-201ENST00000515894 101 ntBASIC0.17□□□□□ -2.38
HMGB1P1B2RPK0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.17□□□□□ -2.38
HMGB1P1B2RPK0 AC243829.3-201ENST00000622177 108 ntBASIC0.17□□□□□ -2.38
HMGB1P1B2RPK0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.17□□□□□ -2.38
HMGB1P1B2RPK0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.16□□□□□ -2.38
HMGB1P1B2RPK0 MIR644A-201ENST00000385262 94 ntBASIC0.16□□□□□ -2.38
HMGB1P1B2RPK0 MT-TF-201ENST00000387314 71 ntBASIC0.16□□□□□ -2.38
HMGB1P1B2RPK0 RNU4-83P-201ENST00000410863 133 ntBASIC0.16□□□□□ -2.38
HMGB1P1B2RPK0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.16□□□□□ -2.38
HMGB1P1B2RPK0 RNY3P15-201ENST00000516297 97 ntBASIC0.16□□□□□ -2.38
HMGB1P1B2RPK0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.16□□□□□ -2.38
HMGB1P1B2RPK0 MIR4769-201ENST00000584126 77 ntBASIC0.16□□□□□ -2.38
HMGB1P1B2RPK0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 MIR302B-201ENST00000362188 73 ntBASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 snoU2_19.2-201ENST00000363024 80 ntBASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 MIR526A2-201ENST00000390198 65 ntBASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 MIR1252-201ENST00000408861 65 ntBASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 RPL21P38-201ENST00000418090 167 ntBASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.631-201ENST00000459607 101 ntBASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 AP001282.2-201ENST00000616149 309 ntBASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.91-201ENST00000363042 107 ntBASIC0.14□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.229-201ENST00000364347 113 ntBASIC0.14□□□□□ -2.39
HMGB1P1B2RPK0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
HMGB1P1B2RPK0 RNU2-70P-201ENST00000410718 179 ntBASIC0.14□□□□□ -2.39
HMGB1P1B2RPK0 RPS29P1-201ENST00000465274 159 ntBASIC0.14□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-1053P-201ENST00000515930 101 ntBASIC0.14□□□□□ -2.39
HMGB1P1B2RPK0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.14□□□□□ -2.39
HMGB1P1B2RPK0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.14□□□□□ -2.39
HMGB1P1B2RPK0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.14□□□□□ -2.39
HMGB1P1B2RPK0 SNORA36.1-201ENST00000363424 132 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-740P-201ENST00000364734 105 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 SNORD114-22-201ENST00000365423 72 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.395-201ENST00000383945 109 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-1189P-201ENST00000383958 107 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 MIR1276-201ENST00000408707 83 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 RNA5SP237-201ENST00000410414 113 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-469P-201ENST00000516253 101 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 MIR5000-201ENST00000577717 103 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 MIR6715A-201ENST00000615929 79 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 AC078938.1-201ENST00000620993 318 ntBASIC0.13□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.16-201ENST00000362421 102 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-403P-201ENST00000363163 104 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.217-201ENST00000364214 105 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-806P-201ENST00000365147 105 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-326P-201ENST00000365480 107 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-597P-201ENST00000365620 102 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.440-201ENST00000384120 114 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.622-201ENST00000411091 108 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 MTND4LP30-201ENST00000454092 297 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.641-201ENST00000459414 105 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-1299P-201ENST00000516316 100 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 SNORA27.4-201ENST00000516650 95 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 MIR6788-201ENST00000618842 66 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 MIR6513-201ENST00000621188 64 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 MIR6717-201ENST00000622747 73 ntBASIC0.12□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.19-201ENST00000362462 99 ntBASIC0.11□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.66-201ENST00000362862 102 ntBASIC0.11□□□□□ -2.39
HMGB1P1B2RPK0 SNORA8.3-201ENST00000384679 139 ntBASIC0.11□□□□□ -2.39
HMGB1P1B2RPK0 ELOCP20-201ENST00000422460 345 ntBASIC0.11□□□□□ -2.39
HMGB1P1B2RPK0 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
HMGB1P1B2RPK0 MIR4711-201ENST00000578274 70 ntBASIC0.11□□□□□ -2.39
HMGB1P1B2RPK0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
HMGB1P1B2RPK0 MIR8066-201ENST00000617280 78 ntBASIC0.11□□□□□ -2.39
HMGB1P1B2RPK0 MIR337-201ENST00000362281 93 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.351-201ENST00000365436 96 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 MT-TT-201ENST00000387460 66 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 MIR548J-201ENST00000408833 112 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 AL603825.1-201ENST00000438481 80 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 AL731563.1-201ENST00000442202 214 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 RNU6-126P-201ENST00000516685 103 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 AP003733.2-201ENST00000529409 171 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 AC104984.5-201ENST00000586878 94 ntBASIC0.1□□□□□ -2.39
HMGB1P1B2RPK0 Y_RNA.26-201ENST00000362539 101 ntBASIC0.09□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-770P-201ENST00000363929 105 ntBASIC0.09□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.634-201ENST00000364811 113 ntBASIC0.09□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.304-201ENST00000365011 112 ntBASIC0.09□□□□□ -2.4
HMGB1P1B2RPK0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms