Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-508P-201ENST00000363231 103 ntBASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 RNU1-133P-201ENST00000364867 167 ntBASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.294-201ENST00000364916 102 ntBASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 SNORA70.7-201ENST00000384159 133 ntBASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.494-201ENST00000384432 111 ntBASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-1154P-201ENST00000391001 104 ntBASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-998P-201ENST00000515894 101 ntBASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 RNU7-43P-201ENST00000516554 64 ntBASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 SNORD53-201ENST00000579969 78 ntBASIC2.03□□□□□ -2.08
PCDHA9Q9Y5H5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 Y_RNA.537-201ENST00000384626 109 ntBASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 MIR30A-201ENST00000385092 71 ntBASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 AL356320.1-201ENST00000429616 163 ntBASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 AL513534.2-201ENST00000603836 250 ntBASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 AC091932.4-201ENST00000623386 200 ntBASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.02□□□□□ -2.09
PCDHA9Q9Y5H5 SNORA24-201ENST00000384096 131 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 AL451046.2-201ENST00000403074 277 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 AL035398.1-201ENST00000430869 322 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 SNORA59A-201ENST00000459326 152 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 UBL5P3-201ENST00000475112 231 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 AC008413.1-201ENST00000511864 177 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 RNU5E-3P-201ENST00000515913 68 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 RNU6-1333P-201ENST00000516162 93 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 RNU6-659P-201ENST00000516454 104 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 AL096840.1-201ENST00000603287 93 ntBASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PCDHA9Q9Y5H5 SNORD28B-201ENST00000390993 75 ntBASIC2□□□□□ -2.09
PCDHA9Q9Y5H5 Y_RNA.617-201ENST00000410920 90 ntBASIC2□□□□□ -2.09
PCDHA9Q9Y5H5 snoU13.9-201ENST00000458927 103 ntBASIC2□□□□□ -2.09
PCDHA9Q9Y5H5 MIR4435-1-201ENST00000582552 80 ntBASIC2□□□□□ -2.09
PCDHA9Q9Y5H5 AL590808.1-201ENST00000618696 141 ntBASIC2□□□□□ -2.09
PCDHA9Q9Y5H5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 RNU6-349P-201ENST00000362402 107 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 RNU6-235P-201ENST00000362644 107 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 RNA5SP205-201ENST00000364653 136 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 RNY1P6-201ENST00000384193 109 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 SNORA22C-201ENST00000384614 134 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 RNA5SP508-201ENST00000411327 119 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 RPS29P29-201ENST00000456396 171 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 HMGN2P23-201ENST00000456759 269 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 Y_RNA.712-201ENST00000517011 92 ntBASIC1.99□□□□□ -2.09
PCDHA9Q9Y5H5 MIR302B-201ENST00000362188 73 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 SNORA67.3-201ENST00000384366 140 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 Z98742.3-201ENST00000418637 326 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 RPL23AP42-201ENST00000471152 471 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 RNU7-53P-201ENST00000516705 60 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 MIR1273D-201ENST00000577266 86 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 MIR4764-201ENST00000580680 88 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 AC243994.1-201ENST00000618627 109 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 AC064859.1-201ENST00000624741 174 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 AL596211.1-201ENST00000569873 2277 ntBASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHA9Q9Y5H5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 Y_RNA.261-201ENST00000364631 102 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 Y_RNA.563-201ENST00000384707 108 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 MIR520C-201ENST00000385005 87 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 AL023284.1-201ENST00000403956 276 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 SNORA3.2-201ENST00000408221 125 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 RNU7-67P-201ENST00000459003 62 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 RNU7-107P-201ENST00000459121 61 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 RNU2-11P-201ENST00000459191 187 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 RN7SKP19-201ENST00000516016 252 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 MIR3198-2-201ENST00000577868 80 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 MIR4791-201ENST00000607666 84 ntBASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PCDHA9Q9Y5H5 MIR342-201ENST00000362212 99 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 MIR302D-201ENST00000362275 68 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 SNORD33-201ENST00000362761 85 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 RNA5SP425-201ENST00000410336 112 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 SNX2P2-201ENST00000424553 323 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 RNU7-73P-201ENST00000458743 63 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-250P-201ENST00000516958 103 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 AC133485.4-201ENST00000561835 220 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 AC138907.4-201ENST00000570107 226 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 AL357312.1-201ENST00000603879 298 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 AC108081.1-201ENST00000604358 221 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 WWP1P1-201ENST00000466609 2769 ntBASIC1.96□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-690P-201ENST00000365242 106 ntBASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 RN7SKP223-201ENST00000410582 62 ntBASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 RNU2-40P-201ENST00000410833 196 ntBASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms