Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU7-53P-201ENST00000516705 60 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 RNA5SP380-201ENST00000517190 98 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 MIR3152-201ENST00000579801 74 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 AC103810.6-201ENST00000606708 136 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 SNORD3E-202ENST00000627253 216 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.92□□□□□ -1.94
NOD1Q9Y239 AC095038.3-201ENST00000634439 195 ntBASIC2.92□□□□□ -1.94
NOD1Q9Y239 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NOD1Q9Y239 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NOD1Q9Y239 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
NOD1Q9Y239 RNU6-661P-201ENST00000362409 107 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 Y_RNA.171-201ENST00000363760 102 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 MIR526A1-201ENST00000384897 85 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 RPS29P29-201ENST00000456396 171 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 AC099513.1-201ENST00000490423 301 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 AC113410.1-201ENST00000505029 247 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 MIR3605-201ENST00000583214 100 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 MIR4635-201ENST00000583759 79 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 MIR4506-201ENST00000584693 77 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 SNORD14A-201ENST00000606526 91 ntBASIC2.91□□□□□ -1.94
NOD1Q9Y239 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
NOD1Q9Y239 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
NOD1Q9Y239 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NOD1Q9Y239 RNA5SP432-201ENST00000362480 116 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 Y_RNA.299-201ENST00000364973 94 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 RNU1-51P-201ENST00000365345 176 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 RNU6-49P-201ENST00000384256 107 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 Y_RNA.507-201ENST00000384500 99 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 SNORD28B-201ENST00000390993 75 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 SNORD123-201ENST00000459473 70 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 RNA5SP385-201ENST00000515947 110 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 MIR3618-201ENST00000580330 88 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 MIR548AR-201ENST00000582191 57 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 U1.36-201ENST00000620684 176 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.9□□□□□ -1.95
NOD1Q9Y239 AP000648.3-201ENST00000623539 4507 ntBASIC2.9□□□□□ -1.95
NOD1Q9Y239 AC093831.2-201ENST00000624393 3427 ntBASIC2.89□□□□□ -1.95
NOD1Q9Y239 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NOD1Q9Y239 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NOD1Q9Y239 VTRNA1-1-201ENST00000363120 99 ntBASIC2.89□□□□□ -1.95
NOD1Q9Y239 MIR1302-4-201ENST00000408701 150 ntBASIC2.89□□□□□ -1.95
NOD1Q9Y239 RNU2-13P-201ENST00000515909 113 ntBASIC2.89□□□□□ -1.95
NOD1Q9Y239 RNU6-1258P-201ENST00000516911 111 ntBASIC2.89□□□□□ -1.95
NOD1Q9Y239 DEFB131E-201ENST00000532329 154 ntBASIC2.89□□□□□ -1.95
NOD1Q9Y239 Y_RNA.773-201ENST00000607168 90 ntBASIC2.89□□□□□ -1.95
NOD1Q9Y239 SNORA22.1-201ENST00000362701 134 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 SNORD115-19-201ENST00000363098 82 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 SNORD115-18-201ENST00000363293 82 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 RNU4-36P-201ENST00000364294 144 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 SNORD73B-201ENST00000364394 72 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 SNORD115-17-201ENST00000364612 82 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 MIR488-201ENST00000365739 83 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 SNORA24-201ENST00000384096 131 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 RNU4-69P-201ENST00000410677 143 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 MTATP8P2-201ENST00000435212 202 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 RNA5SP282-201ENST00000516355 108 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 RNU6-158P-201ENST00000517104 100 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 MIR4791-201ENST00000607666 84 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 AC243994.1-201ENST00000618627 109 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 U4.3-201ENST00000621047 82 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 MIR2052-201ENST00000636055 55 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 MIR203B-201ENST00000636080 86 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 MIR1255B1-201ENST00000636325 63 ntBASIC2.88□□□□□ -1.95
NOD1Q9Y239 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NOD1Q9Y239 Y_RNA.155-201ENST00000363632 101 ntBASIC2.87□□□□□ -1.95
NOD1Q9Y239 RNU1-52P-201ENST00000384190 164 ntBASIC2.87□□□□□ -1.95
NOD1Q9Y239 SNORA67.4-201ENST00000384688 142 ntBASIC2.87□□□□□ -1.95
NOD1Q9Y239 RNA5SP261-201ENST00000410536 106 ntBASIC2.87□□□□□ -1.95
NOD1Q9Y239 DNAJC19P9-201ENST00000555084 351 ntBASIC2.87□□□□□ -1.95
NOD1Q9Y239 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NOD1Q9Y239 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.86□□□□□ -1.95
NOD1Q9Y239 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NOD1Q9Y239 MIR424-201ENST00000362227 98 ntBASIC2.86□□□□□ -1.95
NOD1Q9Y239 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
NOD1Q9Y239 MIR27B-201ENST00000385129 97 ntBASIC2.86□□□□□ -1.95
NOD1Q9Y239 RNU6-1190P-201ENST00000410811 104 ntBASIC2.86□□□□□ -1.95
NOD1Q9Y239 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.86□□□□□ -1.95
NOD1Q9Y239 RPS29P6-201ENST00000438196 145 ntBASIC2.86□□□□□ -1.95
NOD1Q9Y239 AP004217.1-201ENST00000480579 346 ntBASIC2.86□□□□□ -1.95
NOD1Q9Y239 RNU1-41P-201ENST00000516161 162 ntBASIC2.86□□□□□ -1.95
NOD1Q9Y239 RNU1-48P-201ENST00000516400 162 ntBASIC2.86□□□□□ -1.95
NOD1Q9Y239 FAM106DP-201ENST00000586416 501 ntBASIC2.86□□□□□ -1.95
NOD1Q9Y239 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NOD1Q9Y239 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.86□□□□□ -1.95
NOD1Q9Y239 RNU6-363P-201ENST00000362895 105 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 RNY3P2-201ENST00000362918 102 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 SNORA26.6-201ENST00000391256 115 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 SNORA3.2-201ENST00000408221 125 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 RNU4-53P-201ENST00000410828 140 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 RNU7-73P-201ENST00000458743 63 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 snoU13.26-201ENST00000459452 105 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 RNA5SP320-201ENST00000516263 124 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 RNA5SP33-201ENST00000516687 98 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.85□□□□□ -1.95
NOD1Q9Y239 FAM71BP1-201ENST00000604431 523 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 MIR6717-201ENST00000622747 73 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 MIR6841-201ENST00000637129 72 ntBASIC2.85□□□□□ -1.95
NOD1Q9Y239 ZNF658B-202ENST00000615961 3375 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms