Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MIR5582-201ENST00000579697 68 ntBASIC2.56□□□□□ -2
FOXD3Q9UJU5 RN7SL853P-201ENST00000617250 223 ntBASIC2.56□□□□□ -2
FOXD3Q9UJU5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.56□□□□□ -2
FOXD3Q9UJU5 SNORA22.1-201ENST00000362701 134 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 RNU6-905P-201ENST00000384434 107 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 Y_RNA.507-201ENST00000384500 99 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 SNORD28B-201ENST00000390993 75 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 SNORA40.13-201ENST00000516379 120 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 SNORA74.3-201ENST00000517108 154 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 RNU2-19P-201ENST00000517288 84 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 MIR4791-201ENST00000607666 84 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 AC087741.2-201ENST00000619415 172 ntBASIC2.55□□□□□ -2
FOXD3Q9UJU5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.55□□□□□ -2
FOXD3Q9UJU5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.55□□□□□ -2
FOXD3Q9UJU5 MIR9-1-201ENST00000385198 89 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 RNU6-816P-201ENST00000390914 107 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 RNU6-1268P-201ENST00000391214 107 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 SNORA26.6-201ENST00000391256 115 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 RNU6-1239P-201ENST00000391310 107 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 RNU4-69P-201ENST00000410677 143 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 RPS29P6-201ENST00000438196 145 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 RPL23AP6-201ENST00000446637 472 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 RNU7-45P-201ENST00000459460 63 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 AC003982.1-202ENST00000469928 248 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 RNU7-43P-201ENST00000516554 64 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 RNU6-158P-201ENST00000517104 100 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 MIR4319-201ENST00000577285 85 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 FAM106DP-201ENST00000586416 501 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 AL020996.3-201ENST00000606617 222 ntBASIC2.54□□□□□ -2
FOXD3Q9UJU5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.54□□□□□ -2
FOXD3Q9UJU5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
FOXD3Q9UJU5 AC062016.1-201ENST00000355719 319 ntBASIC2.53□□□□□ -2
FOXD3Q9UJU5 RNU6-640P-201ENST00000363693 105 ntBASIC2.53□□□□□ -2
FOXD3Q9UJU5 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
FOXD3Q9UJU5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.53□□□□□ -2
FOXD3Q9UJU5 snoU13.16-201ENST00000459350 104 ntBASIC2.53□□□□□ -2
FOXD3Q9UJU5 AC113410.1-201ENST00000505029 247 ntBASIC2.53□□□□□ -2
FOXD3Q9UJU5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.53□□□□□ -2
FOXD3Q9UJU5 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
FOXD3Q9UJU5 MIR6717-201ENST00000622747 73 ntBASIC2.53□□□□□ -2
FOXD3Q9UJU5 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
FOXD3Q9UJU5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.53□□□□□ -2
FOXD3Q9UJU5 AC005336.3-201ENST00000623833 2679 ntBASIC2.53□□□□□ -2.01
FOXD3Q9UJU5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2.01
FOXD3Q9UJU5 RNU6-457P-201ENST00000363999 107 ntBASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 RNU6-301P-201ENST00000384277 107 ntBASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 RNY4P30-201ENST00000410216 95 ntBASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 RNU6-904P-201ENST00000516206 101 ntBASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 MIR3618-201ENST00000580330 88 ntBASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 MIR4435-1-201ENST00000582552 80 ntBASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 AC095038.3-201ENST00000634439 195 ntBASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXD3Q9UJU5 RNA5SP393-201ENST00000363423 117 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 Y_RNA.171-201ENST00000363760 102 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 MIR590-201ENST00000385008 97 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 MIR524-201ENST00000385242 87 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 SNORD88.1-201ENST00000408684 91 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 RNU6-970P-201ENST00000516312 107 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 SNORA72.7-201ENST00000516349 94 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 MIR2052-201ENST00000636055 55 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 MIR4679-1-201ENST00000637619 75 ntBASIC2.51□□□□□ -2.01
FOXD3Q9UJU5 MIR449A-201ENST00000362113 91 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 RNU6-859P-201ENST00000362728 107 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 RNU4-36P-201ENST00000364294 144 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 SNORA51.10-201ENST00000384418 136 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 MIR196B-201ENST00000384852 84 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 RNU6-913P-201ENST00000390913 95 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 SNORD77B-201ENST00000391112 67 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 AL023284.1-201ENST00000403956 276 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 AC055731.1-201ENST00000474387 401 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 AC141557.1-201ENST00000540982 400 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 FAM71BP1-201ENST00000604431 523 ntBASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.5□□□□□ -2.01
FOXD3Q9UJU5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 RNU6-363P-201ENST00000362895 105 ntBASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 MIR194-1-201ENST00000384892 85 ntBASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 AC011753.1-201ENST00000451001 220 ntBASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 RN7SKP132-201ENST00000516001 208 ntBASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 RNA5SP33-201ENST00000516687 98 ntBASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 RNU6-1258P-201ENST00000516911 111 ntBASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 MIR203B-201ENST00000636080 86 ntBASIC2.49□□□□□ -2.01
FOXD3Q9UJU5 SNORD23.1-201ENST00000408212 104 ntBASIC2.48□□□□□ -2.01
FOXD3Q9UJU5 RNA5SP21-201ENST00000410917 96 ntBASIC2.48□□□□□ -2.01
FOXD3Q9UJU5 RPS3AP1-201ENST00000413190 320 ntBASIC2.48□□□□□ -2.01
FOXD3Q9UJU5 SNORD109B-201ENST00000458961 67 ntBASIC2.48□□□□□ -2.01
FOXD3Q9UJU5 SNORD109A-201ENST00000459128 67 ntBASIC2.48□□□□□ -2.01
FOXD3Q9UJU5 RNU6-322P-201ENST00000516010 103 ntBASIC2.48□□□□□ -2.01
FOXD3Q9UJU5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
FOXD3Q9UJU5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms